| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897715
Identifier: 159897715
GI number: 159897715
Start: 1363554
End: 1364420
Strand: Direct
Name: 159897715
Synonym: Haur_1186
Alternate gene names: NA
Gene position: 1363554-1364420 (Clockwise)
Preceding gene: 159897700
Following gene: 159897717
Centisome position: 21.48
GC content: 50.52
Gene sequence:
>867_bases ATGGCATCGACCATCCTGCACCTTTCCGATTTACACGCTGGCCCACCCTTCAACCCCGAAAAAGCCCAACAAATTCTTGA GGCAGCTTGGCAAATCAAGCCAACCTTAACTGTGTTGTCTGGTGATTTTGTGCAGCGAGCCGATATTCGCAGTCAATGGC TGACGATTCGCGATTTTGTGGCCCAATTGCCTCAGCCGACAATTGCGGTGATGGGCAATCACGATGTGCCGCTTTACAAT GCACTCTATCGGATGCTGCGGCCAAACTATTACTACAAAAAATATATCTCGCCGATTTTAGAGCCAGTGTGGGGCAATGA TGATTTCGTGGCGGTTGGGGTCAATACTACCCGCTCGTTTACGGTCGATGGCGGCAAATTGACCGATCAGCAATTGCTGG AGCTTGAGCGAAGCTTAGCCCGCTATCCTGATAGTTTATGCAAAATCGTGGTCATGCACCACCATCCGGTCATGCCACCA GGCGAAACTCGCGATGTGATTCAGAATGCGGCGGCAGCACTTAGAACTTTTGATCGCAGCAATGTCGAGTTGGTGCTATG TGGCCATACCCATGCTTCATACATTGGCAACACCTTGGAGTTCGACCCTGATTTGCGCCAAGGTACCGTGATTGTGCAGG CTGGCACAGCAACCTCGCGGCGTGGGCGGCGTTGGTATCGTGGTAAAAATGCTTTCAATGTGTTGGAAATTGAGCATATG CGCAGTGTTATCACCCAATATCTCTATTTGGAAGATGCAGGCCGCTTCTTGCCAGTTAGCCAACATCAATTCCCACGACG TTCGGCAGGAGCCTATGCCTTACCATTAAATGAGGCAGTGCTCGAAATTGTGGAGCCAAGCCAGTAA
Upstream 100 bases:
>100_bases TTGTGGCAGTAACCCGTCAATTAAGCCAAGCTGCACGGGGCAAAACTTTGGTTCAAGCCAAACCCACGACAGCAGCAAGT GAAGGCGAGGAAGCGGCTTA
Downstream 100 bases:
>100_bases AACCAACGAGCGCTGAATGTTCAGCGCTCGTTCTAGATTAAATCTACGGTTGGTTTGGAATTTCAAAGCCACTATTTGCC ACCAACCATGTGCCATCATC
Product: metallophosphoesterase
Products: nucleoside 5'-phosphate
Alternate protein names: Phosphohydrolase; DNA Repair Exonuclease; 3 5'-Cyclic-Nucleotide Phosphodiesterase; Transcriptional Regulator Icc Related Protein; Phosphohydrolase Calcineurin-Like Superfamily; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Calcineurin Superfamily Phosphohydrolase; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Metallophosphoesterase Protein; Phosphodiesterase; LacZ Expression Regulatory Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MASTILHLSDLHAGPPFNPEKAQQILEAAWQIKPTLTVLSGDFVQRADIRSQWLTIRDFVAQLPQPTIAVMGNHDVPLYN ALYRMLRPNYYYKKYISPILEPVWGNDDFVAVGVNTTRSFTVDGGKLTDQQLLELERSLARYPDSLCKIVVMHHHPVMPP GETRDVIQNAAAALRTFDRSNVELVLCGHTHASYIGNTLEFDPDLRQGTVIVQAGTATSRRGRRWYRGKNAFNVLEIEHM RSVITQYLYLEDAGRFLPVSQHQFPRRSAGAYALPLNEAVLEIVEPSQ
Sequences:
>Translated_288_residues MASTILHLSDLHAGPPFNPEKAQQILEAAWQIKPTLTVLSGDFVQRADIRSQWLTIRDFVAQLPQPTIAVMGNHDVPLYN ALYRMLRPNYYYKKYISPILEPVWGNDDFVAVGVNTTRSFTVDGGKLTDQQLLELERSLARYPDSLCKIVVMHHHPVMPP GETRDVIQNAAAALRTFDRSNVELVLCGHTHASYIGNTLEFDPDLRQGTVIVQAGTATSRRGRRWYRGKNAFNVLEIEHM RSVITQYLYLEDAGRFLPVSQHQFPRRSAGAYALPLNEAVLEIVEPSQ >Mature_287_residues ASTILHLSDLHAGPPFNPEKAQQILEAAWQIKPTLTVLSGDFVQRADIRSQWLTIRDFVAQLPQPTIAVMGNHDVPLYNA LYRMLRPNYYYKKYISPILEPVWGNDDFVAVGVNTTRSFTVDGGKLTDQQLLELERSLARYPDSLCKIVVMHHHPVMPPG ETRDVIQNAAAALRTFDRSNVELVLCGHTHASYIGNTLEFDPDLRQGTVIVQAGTATSRRGRRWYRGKNAFNVLEIEHMR SVITQYLYLEDAGRFLPVSQHQFPRRSAGAYALPLNEAVLEIVEPSQ
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.4.17
Molecular weight: Translated: 32550; Mature: 32418
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTILHLSDLHAGPPFNPEKAQQILEAAWQIKPTLTVLSGDFVQRADIRSQWLTIRDFV CCCCEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH AQLPQPTIAVMGNHDVPLYNALYRMLRPNYYYKKYISPILEPVWGNDDFVAVGVNTTRSF HHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE TVDGGKLTDQQLLELERSLARYPDSLCKIVVMHHHPVMPPGETRDVIQNAAAALRTFDRS EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC NVELVLCGHTHASYIGNTLEFDPDLRQGTVIVQAGTATSRRGRRWYRGKNAFNVLEIEHM CEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHH RSVITQYLYLEDAGRFLPVSQHQFPRRSAGAYALPLNEAVLEIVEPSQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCC >Mature Secondary Structure ASTILHLSDLHAGPPFNPEKAQQILEAAWQIKPTLTVLSGDFVQRADIRSQWLTIRDFV CCCEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH AQLPQPTIAVMGNHDVPLYNALYRMLRPNYYYKKYISPILEPVWGNDDFVAVGVNTTRSF HHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE TVDGGKLTDQQLLELERSLARYPDSLCKIVVMHHHPVMPPGETRDVIQNAAAALRTFDRS EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC NVELVLCGHTHASYIGNTLEFDPDLRQGTVIVQAGTATSRRGRRWYRGKNAFNVLEIEHM CEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHH RSVITQYLYLEDAGRFLPVSQHQFPRRSAGAYALPLNEAVLEIVEPSQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nucleoside 3',5'-cyclic phosphate; H2O
Specific reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA