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The map label for this gene is yfcA [C]

Identifier: 159897697

GI number: 159897697

Start: 1340810

End: 1341574

Strand: Reverse

Name: yfcA [C]

Synonym: Haur_1168

Alternate gene names: 159897697

Gene position: 1341574-1340810 (Counterclockwise)

Preceding gene: 159897698

Following gene: 159897696

Centisome position: 21.14

GC content: 47.45

Gene sequence:

>765_bases
ATGACCTTGTTGATGTTATGCGGGTTTGCCTTGTTGGCGGGGTTTATTGATGCGGTGGCTGGTGGTGGTGGCTTAATTCA
ACTGCCACCCTTGTTGATTACCCAAAAAGATATTGCTCCAGCCTTTATCCTGGGAACCAATAAATTTGCCGCAGTCACGG
GCACGGCCACGGCAGCGGTCAGTTACAATCGGCGGGTCAAAGTCAATTGGCAAATTGTCGTGCCAGGTATGTTTAGTGCG
GCAATTTGTTCGTGGCTGGGGGCGCGAGCTGTCAGCTTGATTCGGCCAGAGCTTTTTCGGCCAATCATGTTGGTGTTGAT
TATCGCCATGGCAATCTATACCTTTAAACGCAAAGATTTTGGTAGCGCTGCCCGCGAAACCAAAGCCTCAACCAAACCAA
TTCCTTATGTTTTGTTTTTTTGTGGCTTGATTGGTTTTTATGATGGAATTTTCGGGCCTGGCACTGGCAGTTTATTGATG
TTTGCTTTTGTGGGCATTTTAGGCTTCGATTTTTTGCAAGCCTCAGCCACCACCAAAATTATTAATGTAACCACCAACGT
CGCAGCTTTGGTGCAATTTCTGGGTGCAGGCCAAATTATCTGGCATTTGGCTGTACCGATGGCGGTTTGCAATATTGTGG
GCGGCATCATCGGCTCGCGTATGGCCATGGCCAAAGGCAGTCAGTTTGTGCGCGTGATCTTTTTGGTGGTCGTAGTTGGG
GTGATTTTGCGCTATAGCTACGATATCATTCAAGAATTTATGTAA

Upstream 100 bases:

>100_bases
TTGAGTTAATCGCGCCAGTGCCAAGTCTATGGCACGTGGTTGGAGCAGCAGTCGGAATTGATCTGCAAACGGGATTGCTC
GAAGAAGGACATTCAGCGCC

Downstream 100 bases:

>100_bases
AGTATAGAACGGGCTATGGGCTATTTGTAATAGTTTATGAGGTTGGCAACCGCAATTGTTCCCTCACCCCCAACCCCTCT
CCCACGGCGGCGGGCAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTLLMLCGFALLAGFIDAVAGGGGLIQLPPLLITQKDIAPAFILGTNKFAAVTGTATAAVSYNRRVKVNWQIVVPGMFSA
AICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTFKRKDFGSAARETKASTKPIPYVLFFCGLIGFYDGIFGPGTGSLLM
FAFVGILGFDFLQASATTKIINVTTNVAALVQFLGAGQIIWHLAVPMAVCNIVGGIIGSRMAMAKGSQFVRVIFLVVVVG
VILRYSYDIIQEFM

Sequences:

>Translated_254_residues
MTLLMLCGFALLAGFIDAVAGGGGLIQLPPLLITQKDIAPAFILGTNKFAAVTGTATAAVSYNRRVKVNWQIVVPGMFSA
AICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTFKRKDFGSAARETKASTKPIPYVLFFCGLIGFYDGIFGPGTGSLLM
FAFVGILGFDFLQASATTKIINVTTNVAALVQFLGAGQIIWHLAVPMAVCNIVGGIIGSRMAMAKGSQFVRVIFLVVVVG
VILRYSYDIIQEFM
>Mature_253_residues
TLLMLCGFALLAGFIDAVAGGGGLIQLPPLLITQKDIAPAFILGTNKFAAVTGTATAAVSYNRRVKVNWQIVVPGMFSAA
ICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTFKRKDFGSAARETKASTKPIPYVLFFCGLIGFYDGIFGPGTGSLLMF
AFVGILGFDFLQASATTKIINVTTNVAALVQFLGAGQIIWHLAVPMAVCNIVGGIIGSRMAMAKGSQFVRVIFLVVVVGV
ILRYSYDIIQEFM

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=239, Percent_Identity=33.0543933054393, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27201; Mature: 27070

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLMLCGFALLAGFIDAVAGGGGLIQLPPLLITQKDIAPAFILGTNKFAAVTGTATAAV
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCEEEEECCCEEEEECCHHEEE
SYNRRVKVNWQIVVPGMFSAAICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTFKRKDF
ECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAARETKASTKPIPYVLFFCGLIGFYDGIFGPGTGSLLMFAFVGILGFDFLQASATTKI
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE
INVTTNVAALVQFLGAGQIIWHLAVPMAVCNIVGGIIGSRMAMAKGSQFVRVIFLVVVVG
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VILRYSYDIIQEFM
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TLLMLCGFALLAGFIDAVAGGGGLIQLPPLLITQKDIAPAFILGTNKFAAVTGTATAAV
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCEEEEECCCEEEEECCHHEEE
SYNRRVKVNWQIVVPGMFSAAICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTFKRKDF
ECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAARETKASTKPIPYVLFFCGLIGFYDGIFGPGTGSLLMFAFVGILGFDFLQASATTKI
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE
INVTTNVAALVQFLGAGQIIWHLAVPMAVCNIVGGIIGSRMAMAKGSQFVRVIFLVVVVG
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VILRYSYDIIQEFM
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]