| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897658
Identifier: 159897658
GI number: 159897658
Start: 1293029
End: 1293706
Strand: Direct
Name: 159897658
Synonym: Haur_1129
Alternate gene names: NA
Gene position: 1293029-1293706 (Clockwise)
Preceding gene: 159897655
Following gene: 159897659
Centisome position: 20.37
GC content: 50.15
Gene sequence:
>678_bases ATGAATGCTTCGCAATTGCTTAAACAAGAACGCGCTGATGCCGTGGCATTACTTGAATCGTTAACTGAAGAACAATGGCA GGCCACGACGCTTTGCGAAGGCTGGACTGTCACGCATTTGGTGGCGCATATGGTCGCCCGTGAAACTCAACCTATCCGCT TTATCTTCGCCGAATCAACCAAAGGCAAGCTCGGTTTGCACCCCGACGACTTGATGCAACAGGCCTTGAAGCAAGGTCGG TTTGCCTTATTGCAAAAACTGCGCAATGGCCCGCCATTAGCGTTTCGCTTACCTGGCGCAGCCTTGGCTAATTTTGTTGA GCAGTGGGTACATAACGAAGATTTACGCCGTGCTGGCTTGAATAAACCCCGCGTCTCGCCGCCAGCAGTCCAAGATTTAA TTTGGAAATTGCTCCATATCAATGCGCGAATGATGTTGCGCTCGTTCAAAACGCCTGGAATTATTGCGCTAGTCCGGCCC AATGGCAAGTCCTTGGCCTTTCAGGTTGGCACTGGATTTCCACGCCAAGCTAACCTCGCTGATGCAGCGGTTAAATTAAT TGGTGAGCCAGGTGAGATTTTGCTGTATTTATTTGGTCGCAAAAGTGCCGCTAATGTCAGCATCGAGGGCGATCCACATT TAGTTCAGGCCTTACGCGAAGCTGTGATGGCGTTATAG
Upstream 100 bases:
>100_bases AGCAAATTGGAATACTACCCATTGGCAGATCAACCTCTAGCCATCGCCACAATGTGAAGCATGATACAATATCTTGAGAA TTTTAGTGCTTGGAGTTGCC
Downstream 100 bases:
>100_bases GAGAGCAGCATGCAACAGCGCAAGGCCGCCCATATAATTGTAACTGGATTGATGTTGGTGCTCGGCTTGGTATTTGGCGC ATTTTTTGTAGTTTGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MNASQLLKQERADAVALLESLTEEQWQATTLCEGWTVTHLVAHMVARETQPIRFIFAESTKGKLGLHPDDLMQQALKQGR FALLQKLRNGPPLAFRLPGAALANFVEQWVHNEDLRRAGLNKPRVSPPAVQDLIWKLLHINARMMLRSFKTPGIIALVRP NGKSLAFQVGTGFPRQANLADAAVKLIGEPGEILLYLFGRKSAANVSIEGDPHLVQALREAVMAL
Sequences:
>Translated_225_residues MNASQLLKQERADAVALLESLTEEQWQATTLCEGWTVTHLVAHMVARETQPIRFIFAESTKGKLGLHPDDLMQQALKQGR FALLQKLRNGPPLAFRLPGAALANFVEQWVHNEDLRRAGLNKPRVSPPAVQDLIWKLLHINARMMLRSFKTPGIIALVRP NGKSLAFQVGTGFPRQANLADAAVKLIGEPGEILLYLFGRKSAANVSIEGDPHLVQALREAVMAL >Mature_225_residues MNASQLLKQERADAVALLESLTEEQWQATTLCEGWTVTHLVAHMVARETQPIRFIFAESTKGKLGLHPDDLMQQALKQGR FALLQKLRNGPPLAFRLPGAALANFVEQWVHNEDLRRAGLNKPRVSPPAVQDLIWKLLHINARMMLRSFKTPGIIALVRP NGKSLAFQVGTGFPRQANLADAAVKLIGEPGEILLYLFGRKSAANVSIEGDPHLVQALREAVMAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24877; Mature: 24877
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASQLLKQERADAVALLESLTEEQWQATTLCEGWTVTHLVAHMVARETQPIRFIFAEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC KGKLGLHPDDLMQQALKQGRFALLQKLRNGPPLAFRLPGAALANFVEQWVHNEDLRRAGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHCCC NKPRVSPPAVQDLIWKLLHINARMMLRSFKTPGIIALVRPNGKSLAFQVGTGFPRQANLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCHH DAAVKLIGEPGEILLYLFGRKSAANVSIEGDPHLVQALREAVMAL HHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MNASQLLKQERADAVALLESLTEEQWQATTLCEGWTVTHLVAHMVARETQPIRFIFAEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC KGKLGLHPDDLMQQALKQGRFALLQKLRNGPPLAFRLPGAALANFVEQWVHNEDLRRAGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHCCC NKPRVSPPAVQDLIWKLLHINARMMLRSFKTPGIIALVRPNGKSLAFQVGTGFPRQANLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCHH DAAVKLIGEPGEILLYLFGRKSAANVSIEGDPHLVQALREAVMAL HHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA