| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897655
Identifier: 159897655
GI number: 159897655
Start: 1290605
End: 1291051
Strand: Direct
Name: 159897655
Synonym: Haur_1126
Alternate gene names: NA
Gene position: 1290605-1291051 (Clockwise)
Preceding gene: 159897654
Following gene: 159897658
Centisome position: 20.34
GC content: 36.47
Gene sequence:
>447_bases ATGGATACTAATACAATTCTCAAACAAGCGATTATCCAACTTAATCAAATGATTGGCCATACATTTGATGTGCTTCAACT GAGCAAGCCAATTTCTACCGCTGCTGCACTGAACCTACTTAAAATTATTTCAAAACTATCTCCATTAATTGGGAATTTGA TTGAATTCAATATTGTTGAACTACTCAATAAAAACAATCAATTTAAAGACCTTGGGGCTTGGGTTCGCCAAGATCCAGGG TTTCCCGATGCAATTTTTCAAGGTCTAATTAAGCCTAGTCCAGGTTTTGAAATCAAAGCGTGGTTTCCGCTAGCTACCGA AATCACAGTACGATTTAAGGATAGCGTAAACCATTTTGATAATCAAAATATCTATATGGTGCTCATCGCTTGGGTTCCTG AATATGTAACCACTGTTGCTAGTTCAAATCACAAAATCAAGGAATGA
Upstream 100 bases:
>100_bases GCTGCGCGGTTTACCTGAAACTGCTAGCGAGCAATCGCGGGTTGTGGAAGGTGTGCTTTTATTGGTTAGCTACATTCGAT TCTTTTAATTGAGAGAATAT
Downstream 100 bases:
>100_bases TAGTTTGCCATGCGTGAGCTGTAACAAACAATTAAAGCATGCCGCAACAAAGCCTAAGCGCAGATCAATGCCCCGATCCG TCCGATGCGTGAGTTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDTNTILKQAIIQLNQMIGHTFDVLQLSKPISTAAALNLLKIISKLSPLIGNLIEFNIVELLNKNNQFKDLGAWVRQDPG FPDAIFQGLIKPSPGFEIKAWFPLATEITVRFKDSVNHFDNQNIYMVLIAWVPEYVTTVASSNHKIKE
Sequences:
>Translated_148_residues MDTNTILKQAIIQLNQMIGHTFDVLQLSKPISTAAALNLLKIISKLSPLIGNLIEFNIVELLNKNNQFKDLGAWVRQDPG FPDAIFQGLIKPSPGFEIKAWFPLATEITVRFKDSVNHFDNQNIYMVLIAWVPEYVTTVASSNHKIKE >Mature_148_residues MDTNTILKQAIIQLNQMIGHTFDVLQLSKPISTAAALNLLKIISKLSPLIGNLIEFNIVELLNKNNQFKDLGAWVRQDPG FPDAIFQGLIKPSPGFEIKAWFPLATEITVRFKDSVNHFDNQNIYMVLIAWVPEYVTTVASSNHKIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16692; Mature: 16692
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNTILKQAIIQLNQMIGHTFDVLQLSKPISTAAALNLLKIISKLSPLIGNLIEFNIVE CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNKNNQFKDLGAWVRQDPGFPDAIFQGLIKPSPGFEIKAWFPLATEITVRFKDSVNHFD HHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEECCCHHHCC NQNIYMVLIAWVPEYVTTVASSNHKIKE CCCEEEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTNTILKQAIIQLNQMIGHTFDVLQLSKPISTAAALNLLKIISKLSPLIGNLIEFNIVE CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNKNNQFKDLGAWVRQDPGFPDAIFQGLIKPSPGFEIKAWFPLATEITVRFKDSVNHFD HHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEECCCHHHCC NQNIYMVLIAWVPEYVTTVASSNHKIKE CCCEEEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA