| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897644
Identifier: 159897644
GI number: 159897644
Start: 1277182
End: 1278345
Strand: Direct
Name: 159897644
Synonym: Haur_1115
Alternate gene names: NA
Gene position: 1277182-1278345 (Clockwise)
Preceding gene: 159897643
Following gene: 159897645
Centisome position: 20.12
GC content: 49.83
Gene sequence:
>1164_bases ATGCGTAAGGCATGGGTGGTTGCAGCTGGCTTTTTTCTGATTTGTGCGTTAGTCGTGGTTGCGGTGAGCCAAGGTTGGTT GGCTTCATCAGCGCCCTTGGCAATTTTGCCCACCCGGGTGCCTGGCACGCCCGACCCAAGCCAGGCAATTAAGTTGCAAT TGGTCTATAGCAGTGAAAAAGAGGTTTGGCTCAAGCAATCGGTCAATGCGTGGCAGGCAACCAATCCGACTGTCGATGGC AAGCCGATTCAAGTCGAATTGATTTCGCGTGGTTCGCAAGAGATTGTAACGCAGTTGCAGGATGGCAGTTTGCGACCAAC CGCGATCAGCCCCGCTAGCACCTTACAAATTACCCAAATTAATGTCGCCCAGATCGATGCTAAAACCAATTTGGCTGCTG ATGCCGAACCGATGTTGATTTCGCCATTGGTGCTAGCTGCCTACGAAGGTTCGCCCGCCGCCAGCTTGTTGAAATCGCAA GATCCCCAGCTTTGGCAAGCCTTGCACGATGGGGTTCTCATTCCCCAGCGCAGTCAAAAAATTCTATTTGCCCAAACTAG CCCGACCACTTCAAATAGCGGTTTTCAGGCCTGGATTTTGATGGCCTATGCTTACCATAATAAAGCTAGTGGCTTAACCG CTGGAGATGTTAATGATCCTAAATTTGTGGAATGGCTCCAAGGCTACGCCAAAAATGTTGAGCAATTTGCTGAAAGCACT GGTTCGTTAATGCAGAAAATGGTGCAATTTGGGCCAAGTAGCTATGGCGCAGCCGTGGTCTATGAAAGCACGGCGCTTGA GTATTTGCCCAAGGCCCAAGGCCGTTTTGGTAAATTAATCTTGGTCTATCCACCGCAAAATCTTTATAGCGACCATCCTT TGGCCATTTTGGATGCTTCATGGAGCAGCGATGATCAACGGGAAGCAGCTGGATTATTGCGCGAATTTCTACTAGCCAAG CCACAACAAACCACGGCTGTCCAACAAGGCTTTCGCCCTGTCGATCCCGATATTGCGATCGATGCCGCCGATTCGCCTTT TGTTAAATATCAAAGTTCCGGAGTGCAAATGAGCATTCCAAATTTGGCGGCTGAGCCAGATGCTGCCACAATCAAGGCAG TGCTGGATTTGTGGAACTCGTTAGCGGCCAGTGTTAAACGCTAA
Upstream 100 bases:
>100_bases CGTAGATAAATTGCCCATTCTAATGGGCTGAAATGCTATTTTTGCTTAACAAAACCATAACATTTTAGCATTCTGGATTT TTGGATAGAACGGAGTTGTT
Downstream 100 bases:
>100_bases TCAAGGAGTGTCACCAATGCGTTTTCGATTTATACTACGCTTATTATTGCTCTTCATATTTTTGAGCGCCTGTGGTCAGG CGGCTAACCCAATGCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MRKAWVVAAGFFLICALVVVAVSQGWLASSAPLAILPTRVPGTPDPSQAIKLQLVYSSEKEVWLKQSVNAWQATNPTVDG KPIQVELISRGSQEIVTQLQDGSLRPTAISPASTLQITQINVAQIDAKTNLAADAEPMLISPLVLAAYEGSPAASLLKSQ DPQLWQALHDGVLIPQRSQKILFAQTSPTTSNSGFQAWILMAYAYHNKASGLTAGDVNDPKFVEWLQGYAKNVEQFAEST GSLMQKMVQFGPSSYGAAVVYESTALEYLPKAQGRFGKLILVYPPQNLYSDHPLAILDASWSSDDQREAAGLLREFLLAK PQQTTAVQQGFRPVDPDIAIDAADSPFVKYQSSGVQMSIPNLAAEPDAATIKAVLDLWNSLAASVKR
Sequences:
>Translated_387_residues MRKAWVVAAGFFLICALVVVAVSQGWLASSAPLAILPTRVPGTPDPSQAIKLQLVYSSEKEVWLKQSVNAWQATNPTVDG KPIQVELISRGSQEIVTQLQDGSLRPTAISPASTLQITQINVAQIDAKTNLAADAEPMLISPLVLAAYEGSPAASLLKSQ DPQLWQALHDGVLIPQRSQKILFAQTSPTTSNSGFQAWILMAYAYHNKASGLTAGDVNDPKFVEWLQGYAKNVEQFAEST GSLMQKMVQFGPSSYGAAVVYESTALEYLPKAQGRFGKLILVYPPQNLYSDHPLAILDASWSSDDQREAAGLLREFLLAK PQQTTAVQQGFRPVDPDIAIDAADSPFVKYQSSGVQMSIPNLAAEPDAATIKAVLDLWNSLAASVKR >Mature_387_residues MRKAWVVAAGFFLICALVVVAVSQGWLASSAPLAILPTRVPGTPDPSQAIKLQLVYSSEKEVWLKQSVNAWQATNPTVDG KPIQVELISRGSQEIVTQLQDGSLRPTAISPASTLQITQINVAQIDAKTNLAADAEPMLISPLVLAAYEGSPAASLLKSQ DPQLWQALHDGVLIPQRSQKILFAQTSPTTSNSGFQAWILMAYAYHNKASGLTAGDVNDPKFVEWLQGYAKNVEQFAEST GSLMQKMVQFGPSSYGAAVVYESTALEYLPKAQGRFGKLILVYPPQNLYSDHPLAILDASWSSDDQREAAGLLREFLLAK PQQTTAVQQGFRPVDPDIAIDAADSPFVKYQSSGVQMSIPNLAAEPDAATIKAVLDLWNSLAASVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41749; Mature: 41749
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAWVVAAGFFLICALVVVAVSQGWLASSAPLAILPTRVPGTPDPSQAIKLQLVYSSEK CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC EVWLKQSVNAWQATNPTVDGKPIQVELISRGSQEIVTQLQDGSLRPTAISPASTLQITQI HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEECCCCEEEEEEE NVAQIDAKTNLAADAEPMLISPLVLAAYEGSPAASLLKSQDPQLWQALHDGVLIPQRSQK EEEEECCCCCCCCCCCCCEECCEEEEEECCCCHHHHHHCCCHHHHHHHHCCEECCCCCCE ILFAQTSPTTSNSGFQAWILMAYAYHNKASGLTAGDVNDPKFVEWLQGYAKNVEQFAEST EEEEECCCCCCCCCHHHHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GSLMQKMVQFGPSSYGAAVVYESTALEYLPKAQGRFGKLILVYPPQNLYSDHPLAILDAS HHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCEEEEECCHHHCCCCCEEEEECC WSSDDQREAAGLLREFLLAKPQQTTAVQQGFRPVDPDIAIDAADSPFVKYQSSGVQMSIP CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCEEECC NLAAEPDAATIKAVLDLWNSLAASVKR CCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKAWVVAAGFFLICALVVVAVSQGWLASSAPLAILPTRVPGTPDPSQAIKLQLVYSSEK CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCC EVWLKQSVNAWQATNPTVDGKPIQVELISRGSQEIVTQLQDGSLRPTAISPASTLQITQI HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEECCCCEEEEEEE NVAQIDAKTNLAADAEPMLISPLVLAAYEGSPAASLLKSQDPQLWQALHDGVLIPQRSQK EEEEECCCCCCCCCCCCCEECCEEEEEECCCCHHHHHHCCCHHHHHHHHCCEECCCCCCE ILFAQTSPTTSNSGFQAWILMAYAYHNKASGLTAGDVNDPKFVEWLQGYAKNVEQFAEST EEEEECCCCCCCCCHHHHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GSLMQKMVQFGPSSYGAAVVYESTALEYLPKAQGRFGKLILVYPPQNLYSDHPLAILDAS HHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCEEEEECCHHHCCCCCEEEEECC WSSDDQREAAGLLREFLLAKPQQTTAVQQGFRPVDPDIAIDAADSPFVKYQSSGVQMSIP CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCEEECC NLAAEPDAATIKAVLDLWNSLAASVKR CCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA