| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gutR [H]
Identifier: 159897641
GI number: 159897641
Start: 1273087
End: 1274430
Strand: Direct
Name: gutR [H]
Synonym: Haur_1112
Alternate gene names: 159897641
Gene position: 1273087-1274430 (Clockwise)
Preceding gene: 159897637
Following gene: 159897642
Centisome position: 20.06
GC content: 49.4
Gene sequence:
>1344_bases ATGCCTGCTTCAGGGGAAAAATTTGCCCAATTATTAACCGAGGCGCTCTATCAGATTCGCCTGCGTGAATCCAAACCGCT CCAAGTGATCCAAGATGAATTGGGCTATGCCATGGGGCGCAATGGCGGCAGTGTAATCGATTATTGGCGGCGTGGTAATC TCCCGACCAAATTAGCCGATTTGGAGCAGCTGACCCGCACGCTGCAACAACGTGGCGTGCACGATCAACGCTGGATCGAG ACTTTTTTGACGGCTGGTGGTTATCCACCAACTCAAACGCTCATCCAGCCAGTGGCGGCTAGCAAAGCGCTTGATCCAAA TTTGCCCAAACGCTATCGCCAATTGGTTGGCCGTGATAGCCTTGTGCGCCAAGTGTTGCAACACCTCAGTGATCGTGAAG GCTATTGGGTGATTGCAATTGATGGCATGGGCGGCATTGGCAAAACCGCGCTAGCGATGGATTTAATGCAGCGTTTTGTG GCGCAACAGCCCGAATATCGCCCAATTTGGATTAGCGCTGAGCCTCAGCAGGGCGGCGGCATTTTACCCAATCAACCCCT CACCTTCGATAGCCTGATCACCAATTTGGCGCGGCAATTGGCCTTGGCCGATGTAGCTCAGTTGAGCGTTGAAGAAAAAT TTCAACGGCTGCAACAGGTGCTTAAACATCAGCCCATCCTTTTAGTGCTTGATAATTTGGAAACTTCAGGCGAACCACAG CAAGTGTTATTAGAAAAATTGCGTCCGCTGTTGCAACCAAGCAAAGTTATTTTGACCAGCCGTCAGCGCTTCAAGGGCGA AGTATTTAGCGTGCACTTGATTGGCTTGGAAGCTGAACAAGCAGCGCTGTTTATTCGCCAAGATGCTAATGAAAAGGGCG TGCAATGGCTGCAACAGGCCAGCCTCGACGATCTTCAGCCAATTATCAAGGCGACTGGTGGCTCGCCCTTGGCTATGAAA TTGGTTGTCAGTCAATTGGCTTCGTTGCCATTGGATGTGGTGTTGCAGCATGTTCAAAGTGTGACCCAACTCAACCCTGG CGATGAAGATGCCTATGTGCGTTTTTATATGTTCCTGTTTCAACGTTCATGGACGCTACTGGAGCTAAGTGCCAAGCAAT TATTAGTTTCACTAGCGCGATTTGTCCCCTCGAATGGCTGCGATTGGCGAGCAATGCAGCAAATTAGCGCCTTACCTGCG GCTGAATTAGCCCATAGTATTGATATGCTGTGGAAATTATCGCTACTAGAATTGAATGAAGGCGAACGTTTTGGTCAATT ACGTTACTACCTGCACCCCTTAACTCAGCATTTTGTGCTTTCTGAAATTGCTCAGGTGTTGTGA
Upstream 100 bases:
>100_bases TGATCCGAGCAGTGTGCAAAAAGTCATACTAGCCAGCTAGCCAGCTATGCTATAGTTGCTGCTACTACCAGTTGTCAATC TTGCTTGTTGGGAGTTTGCT
Downstream 100 bases:
>100_bases TATGAGCATTCTTGAACCAACCATCCAACAGCCCAATCTTGATTGGCAATTATATTATCAGCAATGTCATCAGCGATTTT TAAATTACTGGCTTAATTTT
Product: NB-ARC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MPASGEKFAQLLTEALYQIRLRESKPLQVIQDELGYAMGRNGGSVIDYWRRGNLPTKLADLEQLTRTLQQRGVHDQRWIE TFLTAGGYPPTQTLIQPVAASKALDPNLPKRYRQLVGRDSLVRQVLQHLSDREGYWVIAIDGMGGIGKTALAMDLMQRFV AQQPEYRPIWISAEPQQGGGILPNQPLTFDSLITNLARQLALADVAQLSVEEKFQRLQQVLKHQPILLVLDNLETSGEPQ QVLLEKLRPLLQPSKVILTSRQRFKGEVFSVHLIGLEAEQAALFIRQDANEKGVQWLQQASLDDLQPIIKATGGSPLAMK LVVSQLASLPLDVVLQHVQSVTQLNPGDEDAYVRFYMFLFQRSWTLLELSAKQLLVSLARFVPSNGCDWRAMQQISALPA AELAHSIDMLWKLSLLELNEGERFGQLRYYLHPLTQHFVLSEIAQVL
Sequences:
>Translated_447_residues MPASGEKFAQLLTEALYQIRLRESKPLQVIQDELGYAMGRNGGSVIDYWRRGNLPTKLADLEQLTRTLQQRGVHDQRWIE TFLTAGGYPPTQTLIQPVAASKALDPNLPKRYRQLVGRDSLVRQVLQHLSDREGYWVIAIDGMGGIGKTALAMDLMQRFV AQQPEYRPIWISAEPQQGGGILPNQPLTFDSLITNLARQLALADVAQLSVEEKFQRLQQVLKHQPILLVLDNLETSGEPQ QVLLEKLRPLLQPSKVILTSRQRFKGEVFSVHLIGLEAEQAALFIRQDANEKGVQWLQQASLDDLQPIIKATGGSPLAMK LVVSQLASLPLDVVLQHVQSVTQLNPGDEDAYVRFYMFLFQRSWTLLELSAKQLLVSLARFVPSNGCDWRAMQQISALPA AELAHSIDMLWKLSLLELNEGERFGQLRYYLHPLTQHFVLSEIAQVL >Mature_446_residues PASGEKFAQLLTEALYQIRLRESKPLQVIQDELGYAMGRNGGSVIDYWRRGNLPTKLADLEQLTRTLQQRGVHDQRWIET FLTAGGYPPTQTLIQPVAASKALDPNLPKRYRQLVGRDSLVRQVLQHLSDREGYWVIAIDGMGGIGKTALAMDLMQRFVA QQPEYRPIWISAEPQQGGGILPNQPLTFDSLITNLARQLALADVAQLSVEEKFQRLQQVLKHQPILLVLDNLETSGEPQQ VLLEKLRPLLQPSKVILTSRQRFKGEVFSVHLIGLEAEQAALFIRQDANEKGVQWLQQASLDDLQPIIKATGGSPLAMKL VVSQLASLPLDVVLQHVQSVTQLNPGDEDAYVRFYMFLFQRSWTLLELSAKQLLVSLARFVPSNGCDWRAMQQISALPAA ELAHSIDMLWKLSLLELNEGERFGQLRYYLHPLTQHFVLSEIAQVL
Specific function: Activator of the glucitol dehydrogenase gene (gutB) [H]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR002182 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00931 NB-ARC; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 50375; Mature: 50244
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASGEKFAQLLTEALYQIRLRESKPLQVIQDELGYAMGRNGGSVIDYWRRGNLPTKLAD CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHH LEQLTRTLQQRGVHDQRWIETFLTAGGYPPTQTLIQPVAASKALDPNLPKRYRQLVGRDS HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHH LVRQVLQHLSDREGYWVIAIDGMGGIGKTALAMDLMQRFVAQQPEYRPIWISAEPQQGGG HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC ILPNQPLTFDSLITNLARQLALADVAQLSVEEKFQRLQQVLKHQPILLVLDNLETSGEPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH QVLLEKLRPLLQPSKVILTSRQRFKGEVFSVHLIGLEAEQAALFIRQDANEKGVQWLQQA HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHC SLDDLQPIIKATGGSPLAMKLVVSQLASLPLDVVLQHVQSVTQLNPGDEDAYVRFYMFLF CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QRSWTLLELSAKQLLVSLARFVPSNGCDWRAMQQISALPAAELAHSIDMLWKLSLLELNE HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC GERFGQLRYYLHPLTQHFVLSEIAQVL CCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PASGEKFAQLLTEALYQIRLRESKPLQVIQDELGYAMGRNGGSVIDYWRRGNLPTKLAD CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHH LEQLTRTLQQRGVHDQRWIETFLTAGGYPPTQTLIQPVAASKALDPNLPKRYRQLVGRDS HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHH LVRQVLQHLSDREGYWVIAIDGMGGIGKTALAMDLMQRFVAQQPEYRPIWISAEPQQGGG HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC ILPNQPLTFDSLITNLARQLALADVAQLSVEEKFQRLQQVLKHQPILLVLDNLETSGEPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH QVLLEKLRPLLQPSKVILTSRQRFKGEVFSVHLIGLEAEQAALFIRQDANEKGVQWLQQA HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHC SLDDLQPIIKATGGSPLAMKLVVSQLASLPLDVVLQHVQSVTQLNPGDEDAYVRFYMFLF CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QRSWTLLELSAKQLLVSLARFVPSNGCDWRAMQQISALPAAELAHSIDMLWKLSLLELNE HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC GERFGQLRYYLHPLTQHFVLSEIAQVL CCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195087; 9455482; 9384377 [H]