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The map label for this gene is 159897636

Identifier: 159897636

GI number: 159897636

Start: 1267546

End: 1268670

Strand: Direct

Name: 159897636

Synonym: Haur_1107

Alternate gene names: NA

Gene position: 1267546-1268670 (Clockwise)

Preceding gene: 159897630

Following gene: 159897637

Centisome position: 19.97

GC content: 51.56

Gene sequence:

>1125_bases
ATGGCCTATTATGTTGAAGAGCGCCCAGGTGGGCCAGCGCTAGCACCTCGTCGCCCCACAATTAATGAATTTTTTCTCTC
GACCTATCAAGTTGGTCCATATGTGGGCTGCGAGTTTGGGTGTGCCTATTGCGATGGCTGGTCGTTCAGTCAGCGGCCAT
TTAACGAGGTTATCCGCGCTAATGTTGATTTGCCTGATCGCTTTGCCGAGCAACTGAGCGTGGTTTCACGCGGCGATCTA
ATTGCCTTCAGCCTTGGCGATGCCTACCAACCTGCCGAAAAAACCTATCGCCTCACCCGCCAGATGCTCCAGGCTTGCCA
AGTTGCCAAGCAACCAGTGTTAATTTTGACCAAAAGCTTGGCAGTGATGGATGATTTGAGCTTGCTGCAACGCATGAATG
AGCAGGGCTTGGCGATTGTGGTGATGAGCATTCCGACGATTGATCCCTTGCTCTCGGAAAAATTAGAGGGCAAAGTTGCC
CCCCCCTCAGCTCGTTTGGAAGCCTTGAATACCCTCAAACGTGCAGGCATTCCAACTGGCGTGGCGATGTTGCCAGTTAT
TCCGTATCTGACCGACACTGATCGCCAATTGCCTTTGACCTTGAATGCGATCGCCAATGTTCAGCCCGATTTTGTGGTTT
GGGAATATCTATGGCAGCCGAATGAACGCCATCGCCAACGAATTACCGATTTGCTTTCGCGCTTGGGCAATTATCCCGCC
TCATATTATCGTGAATTGTATGGCAAGGATATGCAGCCGAGCCTCGAATATCGCCGTGAGATGCATCGCGATATTTTGGG
GCGTTTTGAAGAGCTGAATCTTAACCCGCGAGCACCACTGGAGTTGTATCGCGAGCATTTGGCTCCCAATAATGTGGCGG
CATTGATGCTCAAACATCAAGCCTTTATCGACCAAATCAAGGGTCGCGAACTATTGGCCAGCCGCCACTCGAATTTGGCC
GAAGCGGTGTTCAATGGCAAAGCCGATGAGCCAGCCTTGGCGGTTAGCCCATTGTGGCCGATGTTGCGCGAAGTGCTGAA
TATTAGTGATACCCGCGCCCGACTCGACCAAATTCTTGAAAAAGTGCGTAACCCTGATACCCCTAACGATCCCAGTAGCG
AGTGA

Upstream 100 bases:

>100_bases
TAACATCAAGCACAACGGTGGTTTTACAACGTATGGTGCAATTCGCCTAGCCAAAGTTTGGGTATAATGCGCAGGAATAA
CTACACCATGGAGTCAACCT

Downstream 100 bases:

>100_bases
CCCAAGCAGTGGTCAGCGGTACGCATGAGGTGAAGAAAAAACCGCCTCTAGAAGCTTAAAAATACTACTCGACAAAGCTA
CGAACTCAGGTAGTATGTAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAYYVEERPGGPALAPRRPTINEFFLSTYQVGPYVGCEFGCAYCDGWSFSQRPFNEVIRANVDLPDRFAEQLSVVSRGDL
IAFSLGDAYQPAEKTYRLTRQMLQACQVAKQPVLILTKSLAVMDDLSLLQRMNEQGLAIVVMSIPTIDPLLSEKLEGKVA
PPSARLEALNTLKRAGIPTGVAMLPVIPYLTDTDRQLPLTLNAIANVQPDFVVWEYLWQPNERHRQRITDLLSRLGNYPA
SYYRELYGKDMQPSLEYRREMHRDILGRFEELNLNPRAPLELYREHLAPNNVAALMLKHQAFIDQIKGRELLASRHSNLA
EAVFNGKADEPALAVSPLWPMLREVLNISDTRARLDQILEKVRNPDTPNDPSSE

Sequences:

>Translated_374_residues
MAYYVEERPGGPALAPRRPTINEFFLSTYQVGPYVGCEFGCAYCDGWSFSQRPFNEVIRANVDLPDRFAEQLSVVSRGDL
IAFSLGDAYQPAEKTYRLTRQMLQACQVAKQPVLILTKSLAVMDDLSLLQRMNEQGLAIVVMSIPTIDPLLSEKLEGKVA
PPSARLEALNTLKRAGIPTGVAMLPVIPYLTDTDRQLPLTLNAIANVQPDFVVWEYLWQPNERHRQRITDLLSRLGNYPA
SYYRELYGKDMQPSLEYRREMHRDILGRFEELNLNPRAPLELYREHLAPNNVAALMLKHQAFIDQIKGRELLASRHSNLA
EAVFNGKADEPALAVSPLWPMLREVLNISDTRARLDQILEKVRNPDTPNDPSSE
>Mature_373_residues
AYYVEERPGGPALAPRRPTINEFFLSTYQVGPYVGCEFGCAYCDGWSFSQRPFNEVIRANVDLPDRFAEQLSVVSRGDLI
AFSLGDAYQPAEKTYRLTRQMLQACQVAKQPVLILTKSLAVMDDLSLLQRMNEQGLAIVVMSIPTIDPLLSEKLEGKVAP
PSARLEALNTLKRAGIPTGVAMLPVIPYLTDTDRQLPLTLNAIANVQPDFVVWEYLWQPNERHRQRITDLLSRLGNYPAS
YYRELYGKDMQPSLEYRREMHRDILGRFEELNLNPRAPLELYREHLAPNNVAALMLKHQAFIDQIKGRELLASRHSNLAE
AVFNGKADEPALAVSPLWPMLREVLNISDTRARLDQILEKVRNPDTPNDPSSE

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42376; Mature: 42245

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYVEERPGGPALAPRRPTINEFFLSTYQVGPYVGCEFGCAYCDGWSFSQRPFNEVIRA
CCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHC
NVDLPDRFAEQLSVVSRGDLIAFSLGDAYQPAEKTYRLTRQMLQACQVAKQPVLILTKSL
CCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AVMDDLSLLQRMNEQGLAIVVMSIPTIDPLLSEKLEGKVAPPSARLEALNTLKRAGIPTG
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
VAMLPVIPYLTDTDRQLPLTLNAIANVQPDFVVWEYLWQPNERHRQRITDLLSRLGNYPA
HHHHHHHHCCCCCCCCCCEEHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
SYYRELYGKDMQPSLEYRREMHRDILGRFEELNLNPRAPLELYREHLAPNNVAALMLKHQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHH
AFIDQIKGRELLASRHSNLAEAVFNGKADEPALAVSPLWPMLREVLNISDTRARLDQILE
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHH
KVRNPDTPNDPSSE
HHCCCCCCCCCCCC
>Mature Secondary Structure 
AYYVEERPGGPALAPRRPTINEFFLSTYQVGPYVGCEFGCAYCDGWSFSQRPFNEVIRA
CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHC
NVDLPDRFAEQLSVVSRGDLIAFSLGDAYQPAEKTYRLTRQMLQACQVAKQPVLILTKSL
CCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AVMDDLSLLQRMNEQGLAIVVMSIPTIDPLLSEKLEGKVAPPSARLEALNTLKRAGIPTG
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
VAMLPVIPYLTDTDRQLPLTLNAIANVQPDFVVWEYLWQPNERHRQRITDLLSRLGNYPA
HHHHHHHHCCCCCCCCCCEEHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
SYYRELYGKDMQPSLEYRREMHRDILGRFEELNLNPRAPLELYREHLAPNNVAALMLKHQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHH
AFIDQIKGRELLASRHSNLAEAVFNGKADEPALAVSPLWPMLREVLNISDTRARLDQILE
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHH
KVRNPDTPNDPSSE
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]