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The map label for this gene is ahpF [H]

Identifier: 159897609

GI number: 159897609

Start: 1236433

End: 1237401

Strand: Reverse

Name: ahpF [H]

Synonym: Haur_1080

Alternate gene names: 159897609

Gene position: 1237401-1236433 (Counterclockwise)

Preceding gene: 159897610

Following gene: 159897608

Centisome position: 19.5

GC content: 51.91

Gene sequence:

>969_bases
ATGAGTATCGTGTACGATATTTTGATCATTGGCGGCGGACCATCGGCATTGGCTGCGGCATTTTATGCCCAAAACAAGCA
ATTACGCACGCTGATGATTTACGCCGACCTCGGCGGCAAAGCTGGCTGGGCGCATAACCGTACCGTCAACGGCACGATCA
ACGTTCTGCCCGGACACGATCTAGTGGAACGGCTGATTAGCCAGCTTTCGAATCACCAATCGTCGGTCGCCCACATTAAT
GATCGGGTTGTCGGGCTGCGCAAAACTAATAGCATGTTTGTGGTTGATACCCAACAATACGGCGAACGCTATGCCCGTTC
GGTTGTAGTTGCCAGCGGTGCAGCTCCCAATCGCTTGCCCTTACCAGGTATTCAACATTTGTTCGGAGTGGGCTTGGGCT
ATTCAATCACAACCTTTGCCCATCAAACCCAAGGCCAACGGGTGGCGGTCTATGGCGTAACTCCGCGTACAATTCGCGGG
GTCGCCGAAATCGTCTTAGGCTCGAACCATATCTATTGGGTCAGCCCAGATGAAGATTTGCCAGAAGTGCCTTTAGTCGA
TGCCATTCGGCGCATGCCCAATGTCACAATCATTCCCCAAGCCACCATCCGCGATGTCGTGGGGATCAATTCGGTCAAGC
AGATTGTGATTGAACGCGGCACATCGTTGCAGCATATTCCGGTTGATCGGCTATTTGTCGATATTGGCATTCAGCCAAAT
ACTGGCTTCCTGAACAATGGCAACGTCGATGTGCTCGATGAAGATGGCTTTGTGATTGTCGATGAATATAATAGCTCGCC
CTGCCACGGTATTTTTGCCGCTGGCGATGTGAGCAACAGTGTTCTTGGTGAACAAGTGTTAATTGCGATTGGCGATGGCG
TTCGCGCCGCCGTCAGTGCCTACGAATACCTGCTTGTTCATAAGCTCACGCTTGAAGAAGTGAGCCACGCAGCCGGCAAG
ACTGCTTAA

Upstream 100 bases:

>100_bases
GGTGTCTGGGCCTTCCACTGCCACATTTTGTCACACGCCGAAAGTGAACACGGCATGTTTGGGATGGTTACAGCGCTAAT
CGTCGAATAGGAGCGCGACC

Downstream 100 bases:

>100_bases
TCTCGCTTAGCTCGGTTCCCCAACAAGGACACAGGGATGCCTGTGTCCTTGTTTTTCACGGCATAGTCTTTGCTTGTTCA
GTATCAGCATAATCAAGGAG

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: Alkyl hydroperoxide reductase [H]

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSIVYDILIIGGGPSALAAAFYAQNKQLRTLMIYADLGGKAGWAHNRTVNGTINVLPGHDLVERLISQLSNHQSSVAHIN
DRVVGLRKTNSMFVVDTQQYGERYARSVVVASGAAPNRLPLPGIQHLFGVGLGYSITTFAHQTQGQRVAVYGVTPRTIRG
VAEIVLGSNHIYWVSPDEDLPEVPLVDAIRRMPNVTIIPQATIRDVVGINSVKQIVIERGTSLQHIPVDRLFVDIGIQPN
TGFLNNGNVDVLDEDGFVIVDEYNSSPCHGIFAAGDVSNSVLGEQVLIAIGDGVRAAVSAYEYLLVHKLTLEEVSHAAGK
TA

Sequences:

>Translated_322_residues
MSIVYDILIIGGGPSALAAAFYAQNKQLRTLMIYADLGGKAGWAHNRTVNGTINVLPGHDLVERLISQLSNHQSSVAHIN
DRVVGLRKTNSMFVVDTQQYGERYARSVVVASGAAPNRLPLPGIQHLFGVGLGYSITTFAHQTQGQRVAVYGVTPRTIRG
VAEIVLGSNHIYWVSPDEDLPEVPLVDAIRRMPNVTIIPQATIRDVVGINSVKQIVIERGTSLQHIPVDRLFVDIGIQPN
TGFLNNGNVDVLDEDGFVIVDEYNSSPCHGIFAAGDVSNSVLGEQVLIAIGDGVRAAVSAYEYLLVHKLTLEEVSHAAGK
TA
>Mature_321_residues
SIVYDILIIGGGPSALAAAFYAQNKQLRTLMIYADLGGKAGWAHNRTVNGTINVLPGHDLVERLISQLSNHQSSVAHIND
RVVGLRKTNSMFVVDTQQYGERYARSVVVASGAAPNRLPLPGIQHLFGVGLGYSITTFAHQTQGQRVAVYGVTPRTIRGV
AEIVLGSNHIYWVSPDEDLPEVPLVDAIRRMPNVTIIPQATIRDVVGINSVKQIVIERGTSLQHIPVDRLFVDIGIQPNT
GFLNNGNVDVLDEDGFVIVDEYNSSPCHGIFAAGDVSNSVLGEQVLIAIGDGVRAAVSAYEYLLVHKLTLEEVSHAAGKT
A

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone [H]

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI87081763, Length=314, Percent_Identity=28.0254777070064, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787114, Length=315, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012081
- InterPro:   IPR013027
- InterPro:   IPR002109
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 34675; Mature: 34544

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVYDILIIGGGPSALAAAFYAQNKQLRTLMIYADLGGKAGWAHNRTVNGTINVLPGHD
CCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEECCEEEEECCHH
LVERLISQLSNHQSSVAHINDRVVGLRKTNSMFVVDTQQYGERYARSVVVASGAAPNRLP
HHHHHHHHHHCCCHHHEECCCEEEEEEECCCEEEEECHHHHHHHHHEEEEECCCCCCCCC
LPGIQHLFGVGLGYSITTFAHQTQGQRVAVYGVTPRTIRGVAEIVLGSNHIYWVSPDEDL
CCHHHHHHHCCCCCEEEEEEHHCCCCEEEEEECCHHHHHHHHHHEECCCEEEEECCCCCC
PEVPLVDAIRRMPNVTIIPQATIRDVVGINSVKQIVIERGTSLQHIPVDRLFVDIGIQPN
CCCCHHHHHHHCCCEEEECCHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCC
TGFLNNGNVDVLDEDGFVIVDEYNSSPCHGIFAAGDVSNSVLGEQVLIAIGDGVRAAVSA
CCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHH
YEYLLVHKLTLEEVSHAAGKTA
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIVYDILIIGGGPSALAAAFYAQNKQLRTLMIYADLGGKAGWAHNRTVNGTINVLPGHD
CEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEECCEEEEECCHH
LVERLISQLSNHQSSVAHINDRVVGLRKTNSMFVVDTQQYGERYARSVVVASGAAPNRLP
HHHHHHHHHHCCCHHHEECCCEEEEEEECCCEEEEECHHHHHHHHHEEEEECCCCCCCCC
LPGIQHLFGVGLGYSITTFAHQTQGQRVAVYGVTPRTIRGVAEIVLGSNHIYWVSPDEDL
CCHHHHHHHCCCCCEEEEEEHHCCCCEEEEEECCHHHHHHHHHHEECCCEEEEECCCCCC
PEVPLVDAIRRMPNVTIIPQATIRDVVGINSVKQIVIERGTSLQHIPVDRLFVDIGIQPN
CCCCHHHHHHHCCCEEEECCHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCC
TGFLNNGNVDVLDEDGFVIVDEYNSSPCHGIFAAGDVSNSVLGEQVLIAIGDGVRAAVSA
CCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHH
YEYLLVHKLTLEEVSHAAGKTA
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917890; 2760020 [H]