Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897578
Identifier: 159897578
GI number: 159897578
Start: 1197906
End: 1198259
Strand: Direct
Name: 159897578
Synonym: Haur_1049
Alternate gene names: NA
Gene position: 1197906-1198259 (Clockwise)
Preceding gene: 159897571
Following gene: 159897579
Centisome position: 18.87
GC content: 49.15
Gene sequence:
>354_bases ATGCCAACCATTCTTGCTGTTGATGACGATACCACGGTTTGCGCCTTGATTCGCCATTTCTTGGGCGCTGATTATACAAT TTTAACTGCCTCAAGCGTCGGCCAAGCACTGCTGTTGCTTGAAACAAGTATCCCCGATCTTCTATTAATTGATGAATTAC TACCTGATATGCGTGGCCATGAGTTTTGCCACATCCTTGAGCACAACCCGCGCCTGCGCCAAATTCCGCGCATTATGATG TCGGCCTCGACTCATTACATCGTGGCAGGCACGCCCAATGTGCTGATGTATCTTCGCAAGCCGTTTCGCCGTGAACAATT GTTGATGGCGGTGAGCGATGTGCTTGGAGAATAA
Upstream 100 bases:
>100_bases AACACTCTAAACCATCGCATTGCCCAATCCTTTGTACCGATCGCGGTTATCCCATCGTTGAAGCTGATCGATCACACTAC CATTGTTATGAAGGGTTTCC
Downstream 100 bases:
>100_bases CAGTAAAATCAAAAGGCAGAAGGCAAAAATTAAAATCAGCTAAAGAAAGGGTTCAGGGGTCAGATTTTACTCGACTCATT GGGACTTGACTCTGACACAG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPTILAVDDDTTVCALIRHFLGADYTILTASSVGQALLLLETSIPDLLLIDELLPDMRGHEFCHILEHNPRLRQIPRIMM SASTHYIVAGTPNVLMYLRKPFRREQLLMAVSDVLGE
Sequences:
>Translated_117_residues MPTILAVDDDTTVCALIRHFLGADYTILTASSVGQALLLLETSIPDLLLIDELLPDMRGHEFCHILEHNPRLRQIPRIMM SASTHYIVAGTPNVLMYLRKPFRREQLLMAVSDVLGE >Mature_116_residues PTILAVDDDTTVCALIRHFLGADYTILTASSVGQALLLLETSIPDLLLIDELLPDMRGHEFCHILEHNPRLRQIPRIMMS ASTHYIVAGTPNVLMYLRKPFRREQLLMAVSDVLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13155; Mature: 13024
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTILAVDDDTTVCALIRHFLGADYTILTASSVGQALLLLETSIPDLLLIDELLPDMRGH CCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCC EFCHILEHNPRLRQIPRIMMSASTHYIVAGTPNVLMYLRKPFRREQLLMAVSDVLGE CEEEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PTILAVDDDTTVCALIRHFLGADYTILTASSVGQALLLLETSIPDLLLIDELLPDMRGH CEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCC EFCHILEHNPRLRQIPRIMMSASTHYIVAGTPNVLMYLRKPFRREQLLMAVSDVLGE CEEEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA