| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897571
Identifier: 159897571
GI number: 159897571
Start: 1189962
End: 1190723
Strand: Direct
Name: 159897571
Synonym: Haur_1042
Alternate gene names: NA
Gene position: 1189962-1190723 (Clockwise)
Preceding gene: 159897567
Following gene: 159897578
Centisome position: 18.75
GC content: 54.2
Gene sequence:
>762_bases ATGGATGAAAATGCCTTGCCCGACCCAATGCTGCTAACATGGATGGGCAGTTATACCCATGCCGATTTGCACCATGTGAC CCGTGCTACCCAACTGTTACATCATTTAGCGCCATTTCGCGATTTGAGCGAGGCGGCGGTGATTGGGCGCTGGTTCACAT GGCTTTTGATGCTGGAACATCACACATTAACTTACCTTGATTTGAATATTGAGCAAGCCCAGCGTTATTGGCGTGGCTTA CGGGCGGTCGCCGAACAGCGTTCAGCTGCGACCTCACCACTTGGTCAAGCCTTGGGAGATTTCGTGGGCAATTTGCCACG CCTGCCAGCTTTCAGCAGCAGCGATTTGATGCTGGTCAGTTTGGCAATTGGCCATACGCTCGATGGTTTGGCGTGGCGTT ATAGCTGGCAACGCCAAAATAGCGAGCCAGCCGCCAGTTCGTTGTTAGATGCGATGGGGCGTTCGAGTGGCATGTATACA GCGTTGACCTTGCTCAGTGGCTTGCGTGGTTGGCGTTTATCCGAGGTATTGCAGCAGCATCCGGCGCGGCGTTGTATTAA AGTGGTCGAGGCGGTTGCCGGCACATTGCGCCTCCAACCAACCTCGGCCTTACCCGATAATTTGTGGCAAGCCCTGGAGC AAGCCTTCAATCCGCTTGAAACGCGCTGGGCTGATTATCGTCAAACCAGCGGCCTATTGTTGCAGCGCTACCAAACATGG CTCACCAGCGACCAATCTATTGCCGACGCAAACGCTGAGTGA
Upstream 100 bases:
>100_bases TGGATTATTACAGCACGTAAATATATACCAAGCATTATTTGTTGAGGCTAAATAAGCCGATTATTACAATCAGCTTGTGA TAGTTGATGGAGATACCCTG
Downstream 100 bases:
>100_bases GCGATTGATAAAAATGGGCTTGAGGATAAACATGGGCAAAACGGCAAATCTCTTGAGCACGGGTGACCTCAATCAGATCA TCAGGCTCAATTGGAAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MDENALPDPMLLTWMGSYTHADLHHVTRATQLLHHLAPFRDLSEAAVIGRWFTWLLMLEHHTLTYLDLNIEQAQRYWRGL RAVAEQRSAATSPLGQALGDFVGNLPRLPAFSSSDLMLVSLAIGHTLDGLAWRYSWQRQNSEPAASSLLDAMGRSSGMYT ALTLLSGLRGWRLSEVLQQHPARRCIKVVEAVAGTLRLQPTSALPDNLWQALEQAFNPLETRWADYRQTSGLLLQRYQTW LTSDQSIADANAE
Sequences:
>Translated_253_residues MDENALPDPMLLTWMGSYTHADLHHVTRATQLLHHLAPFRDLSEAAVIGRWFTWLLMLEHHTLTYLDLNIEQAQRYWRGL RAVAEQRSAATSPLGQALGDFVGNLPRLPAFSSSDLMLVSLAIGHTLDGLAWRYSWQRQNSEPAASSLLDAMGRSSGMYT ALTLLSGLRGWRLSEVLQQHPARRCIKVVEAVAGTLRLQPTSALPDNLWQALEQAFNPLETRWADYRQTSGLLLQRYQTW LTSDQSIADANAE >Mature_253_residues MDENALPDPMLLTWMGSYTHADLHHVTRATQLLHHLAPFRDLSEAAVIGRWFTWLLMLEHHTLTYLDLNIEQAQRYWRGL RAVAEQRSAATSPLGQALGDFVGNLPRLPAFSSSDLMLVSLAIGHTLDGLAWRYSWQRQNSEPAASSLLDAMGRSSGMYT ALTLLSGLRGWRLSEVLQQHPARRCIKVVEAVAGTLRLQPTSALPDNLWQALEQAFNPLETRWADYRQTSGLLLQRYQTW LTSDQSIADANAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28475; Mature: 28475
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENALPDPMLLTWMGSYTHADLHHVTRATQLLHHLAPFRDLSEAAVIGRWFTWLLMLEH CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTLTYLDLNIEQAQRYWRGLRAVAEQRSAATSPLGQALGDFVGNLPRLPAFSSSDLMLVS CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH LAIGHTLDGLAWRYSWQRQNSEPAASSLLDAMGRSSGMYTALTLLSGLRGWRLSEVLQQH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH PARRCIKVVEAVAGTLRLQPTSALPDNLWQALEQAFNPLETRWADYRQTSGLLLQRYQTW HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LTSDQSIADANAE HCCCCCCCCCCCC >Mature Secondary Structure MDENALPDPMLLTWMGSYTHADLHHVTRATQLLHHLAPFRDLSEAAVIGRWFTWLLMLEH CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTLTYLDLNIEQAQRYWRGLRAVAEQRSAATSPLGQALGDFVGNLPRLPAFSSSDLMLVS CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH LAIGHTLDGLAWRYSWQRQNSEPAASSLLDAMGRSSGMYTALTLLSGLRGWRLSEVLQQH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH PARRCIKVVEAVAGTLRLQPTSALPDNLWQALEQAFNPLETRWADYRQTSGLLLQRYQTW HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LTSDQSIADANAE HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA