The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897577

Identifier: 159897577

GI number: 159897577

Start: 1196371

End: 1197825

Strand: Reverse

Name: 159897577

Synonym: Haur_1048

Alternate gene names: NA

Gene position: 1197825-1196371 (Counterclockwise)

Preceding gene: 159897580

Following gene: 159897576

Centisome position: 18.87

GC content: 48.93

Gene sequence:

>1455_bases
ATGCGATGGTTTAGAGTGTTGTTTGTGCTATTGATTGTAGCAGGATTTGGCCTGACATGGTATCTTTTGCAGCCTCAAAA
TAGCTTGGTTTGGCAAACATTCACCCCTACGGTTATCCCGCTGGAACAGGCTGAGTTGGCCAATCCTGGGCGTGGGCTAT
ATCAATGGCGTGGCCAAACCATGATCTGTCCTAGCGAGTTGATTTCGAATCGCGAACGCTATGATCGCTGGACATGGGCC
GAACTTGAGCCAAACGAAAATCAATACGATTGGCAAGAAATTCATCAATTACTGGATATGGCTGAGCAGAACGGCCAGCG
GGTTTGGCTCGGTTTGGGGGCAAGTGCTGGCCCAAGTAATAATGGCCCGTTTTTACCAATTTACTTGCAGAAACCTGAAT
TTGGCGCAAACTTTGAAGGCGATTGGTATCCAAATTACAATCATCCTTTTGTGCAAAACCGCCTCGAAGCCTTGTTGGCA
GCCTTTGTGGCCGAATTTGCGGGCGATCAGCGGATTTTGGGCGTGCAGATGCGCAGTTATGGCCGTTATGGCGAGGGCTA
TTTGCCATGGAACGCCGATAAAAGCCATGGAATGTGGGCCAGCGAAAGTACGGCCCGCTGGCTGGTTGATGCTTGGCATA
CCCGACTCAGCCCGCATTTTCTGATTTCAATTCCGCTGAGTAATAATCCAGTGTTTTACTATGCCATGACCAAGCAACCC
TATTGGAGCATTACCCGTGATGCCTTGGGCATGCCTGAACAAATGGGTAATATTGATCAACTCATTCAAAGTGATATTAC
GGTTGATGGCCAAGCAATTGGCCCGTTGGTGGCTGAGCGTTGGAAAGTAGCGCCGATGTTTAGCGAGATGATCGGTGAAT
ATGGTGAGCGCGATTATAGTGGCCAGTTTTTGGCAGCCCAAACCCAAGTGATTTCATATCATATTTCGTATGTGAGCAAC
GGCAATTTTGCCCAGCCCTATCGCGCAAGCCCGTGGGATTTCTGGCGTGATCCAATTAATTGTCCTGAGCAAGCCAGCAA
TTGGAGTAATGCCGATATTGAGAATTTTATGCTGGCGGGCAAATTAGCCGGTTATCGCTATGCCCCAACCACGATCAAAC
TCGCCATCGATAACCAGCAGCTCCAGATCGAAAGTAGCTGGCAAAACGCTGGAGTTGCCCCGATATATGAGCGTTGGCCG
TTGGTATGGCAATTACGCGATGCTACTCAGACTGTGGTTTGGCAAGGCGAATCAAGCCTTGATTTACGCCAACTTTTGCC
AGCCCAAGCCTATGAGCATCGCCAACAATTTGAACAATTCAAGCTGCCAGCGGGTGAGTATGAATTGCGATTGGTTGCTC
CAGCGATCAATCGCTATGTACGGCCTTTGCAATTGGCAATTGAAGGCCAGCTGGATGATGGGGCATATCGGATTGGAATT
CTGAGCATTCGTTAA

Upstream 100 bases:

>100_bases
ACAGCAAGAATGGTTGGCATGGAAACCCTTCATAACAATGGTAGTGTGATCGATCAGCTTCAACGATGGGATAACCGCGA
TCGGTACAAAGGATTGGGCA

Downstream 100 bases:

>100_bases
TATCTAATTCTGGGGCTAATTGCAAAATCGTGGCACAATACAAACACGCCAATAGTTGGCACGATTGGCTTGATCTCACG
CTTGCGACGGTTGCGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA
ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA
AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP
YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN
GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP
LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI
LSIR

Sequences:

>Translated_484_residues
MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA
ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA
AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP
YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN
GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP
LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI
LSIR
>Mature_484_residues
MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA
ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA
AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP
YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN
GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP
LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI
LSIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55737; Mature: 55737

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQT
CHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCCCEEECCCE
MICPSELISNRERYDRWTWAELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSN
EECHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLAAFVAEFAGDQRILGVQMRSY
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHC
GRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYS
CCHHHHHHCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQFLAAQTQVISYHISYVSNGNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAG
CCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCHHHHEEEH
KLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWPLVWQLRDATQTVVWQGESSL
HHCCCEECCEEEEEEECCCEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCC
DLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCEEEEEEECCCCCCEEEEEE
LSIR
EEEC
>Mature Secondary Structure
MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQT
CHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCCCEEECCCE
MICPSELISNRERYDRWTWAELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSN
EECHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLAAFVAEFAGDQRILGVQMRSY
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHC
GRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC
YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYS
CCHHHHHHCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQFLAAQTQVISYHISYVSNGNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAG
CCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCHHHHEEEH
KLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWPLVWQLRDATQTVVWQGESSL
HHCCCEECCEEEEEEECCCEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCC
DLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCEEEEEEECCCCCCEEEEEE
LSIR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA