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The map label for this gene is ycjS [C]

Identifier: 159897568

GI number: 159897568

Start: 1185827

End: 1186867

Strand: Reverse

Name: ycjS [C]

Synonym: Haur_1039

Alternate gene names: 159897568

Gene position: 1186867-1185827 (Counterclockwise)

Preceding gene: 159897569

Following gene: 159897564

Centisome position: 18.7

GC content: 50.91

Gene sequence:

>1041_bases
ATGAAAATTGCAATTATTGGAACCGGTTGGGGTGCTCGCGTTCAGGTGCCAGCCTTTCGTTCGGCTGGGCTGAAAATCGT
GGGGATCGCCGCCCAAAATTATGAAAAAACTCAGCGTGAAGCTGCCACTTTGAATGTTGAAGCCTTTGAACATTGGCGTG
ATTTGCTCAGCAGCGATGCCGATTTGATTTCGATTGTGACCCCGCCAGGGACGCATTGCGAAATCAGCGTAGCGGCCTTA
GAAGCTGGCAAGCATGTGTTGTGCGAAAAACCAACAGCATTAAATGTGCTCGAAGCCCAAACCATGCTCGAAGCCGCCCA
AGCCCATCCTGAACAATTAAGTTTGATCGATCATGAATTACGCTTTTTACCAATTTTTCAAATGGCGCGGGCGTTGATTA
ATGATGGTGCGATCGGCCAGATTCGCCATGTCAATAGCAGCGTGATCTTCTCGTCGCGAGCTGACCCGCAACGTCCTTGG
AACTGGTGGAGTGATAAAGAGCAAGCTGGTGGTGCTTGGGGTGCGATTGGCTCACACCAAATTGATATGTTGCGCTGGTT
GTGTGGCGATTTTAGCTCAATTCGCGCAAGCTTGCACACCTTTGTAACTGAACGACCACTCGACGATCAACTCTTGCCTG
TCACCAGTGATGATTTTGCCACGGCTCAAGTGCGTTTGGCGAATGGTGGTTTTGCCTCAATTATGATTAGTGGCGTGGCG
GCACTCAACGAAAACGATCGTATGATTATTCATGGCGAACATGGCGCGATCAAAATTGAAGGCGCTCGTTTGTGGCATGC
CGAGCGTGATGGCGAGTGGCAAGAGCGCACGCCTGCTCATACGGTAGCGATTCCAAGCGAAATTAGTGGTAACTTCCCAG
TGGGAACGGTCTATCTTGGCCATGCCTTGAAGGCCTACAGCCGTGGTCAGCTTGATGCGTTGGAGCAAGCCGCCACGTTT
AGCGATGGCTTGCTGACCCAAAGTTTGCTTGATGCTGCTCATCGCTCCGATGAAAATGACGGTGGCTGGATTACGATCTA
G

Upstream 100 bases:

>100_bases
CCTTGAGCAATTGGGCTTGCCACGGCAGGAGATCGAGCAAAGCCTTGGCCAACTCGCCGCACATTAGGATTGCATTGCGC
TCCAAGGGAGGTTTATTTCG

Downstream 100 bases:

>100_bases
TAGGTTCCCGCACCTCGCGTGCGGGAGCTTGCTTGTTAAGTTCCCTTACCCCAACCCCTCGCCCACTGCGGTGGGCGAGG
GGCTTTTTTCTTAGTCGTCC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKIAIIGTGWGARVQVPAFRSAGLKIVGIAAQNYEKTQREAATLNVEAFEHWRDLLSSDADLISIVTPPGTHCEISVAAL
EAGKHVLCEKPTALNVLEAQTMLEAAQAHPEQLSLIDHELRFLPIFQMARALINDGAIGQIRHVNSSVIFSSRADPQRPW
NWWSDKEQAGGAWGAIGSHQIDMLRWLCGDFSSIRASLHTFVTERPLDDQLLPVTSDDFATAQVRLANGGFASIMISGVA
ALNENDRMIIHGEHGAIKIEGARLWHAERDGEWQERTPAHTVAIPSEISGNFPVGTVYLGHALKAYSRGQLDALEQAATF
SDGLLTQSLLDAAHRSDENDGGWITI

Sequences:

>Translated_346_residues
MKIAIIGTGWGARVQVPAFRSAGLKIVGIAAQNYEKTQREAATLNVEAFEHWRDLLSSDADLISIVTPPGTHCEISVAAL
EAGKHVLCEKPTALNVLEAQTMLEAAQAHPEQLSLIDHELRFLPIFQMARALINDGAIGQIRHVNSSVIFSSRADPQRPW
NWWSDKEQAGGAWGAIGSHQIDMLRWLCGDFSSIRASLHTFVTERPLDDQLLPVTSDDFATAQVRLANGGFASIMISGVA
ALNENDRMIIHGEHGAIKIEGARLWHAERDGEWQERTPAHTVAIPSEISGNFPVGTVYLGHALKAYSRGQLDALEQAATF
SDGLLTQSLLDAAHRSDENDGGWITI
>Mature_346_residues
MKIAIIGTGWGARVQVPAFRSAGLKIVGIAAQNYEKTQREAATLNVEAFEHWRDLLSSDADLISIVTPPGTHCEISVAAL
EAGKHVLCEKPTALNVLEAQTMLEAAQAHPEQLSLIDHELRFLPIFQMARALINDGAIGQIRHVNSSVIFSSRADPQRPW
NWWSDKEQAGGAWGAIGSHQIDMLRWLCGDFSSIRASLHTFVTERPLDDQLLPVTSDDFATAQVRLANGGFASIMISGVA
ALNENDRMIIHGEHGAIKIEGARLWHAERDGEWQERTPAHTVAIPSEISGNFPVGTVYLGHALKAYSRGQLDALEQAATF
SDGLLTQSLLDAAHRSDENDGGWITI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI226371727, Length=359, Percent_Identity=28.4122562674095, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI9506675, Length=363, Percent_Identity=26.9972451790634, Blast_Score=124, Evalue=2e-28,
Organism=Escherichia coli, GI1787574, Length=207, Percent_Identity=28.0193236714976, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081947, Length=277, Percent_Identity=25.9927797833935, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=270, Percent_Identity=25.5555555555556, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI19920536, Length=357, Percent_Identity=29.1316526610644, Blast_Score=144, Evalue=8e-35,
Organism=Drosophila melanogaster, GI24581117, Length=210, Percent_Identity=27.6190476190476, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37732; Mature: 37732

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIIGTGWGARVQVPAFRSAGLKIVGIAAQNYEKTQREAATLNVEAFEHWRDLLSSDA
CEEEEEECCCCCEEECCCHHHCCEEEEEEECCCHHHHHHHHHEEEHHHHHHHHHHHCCCC
DLISIVTPPGTHCEISVAALEAGKHVLCEKPTALNVLEAQTMLEAAQAHPEQLSLIDHEL
CEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
RFLPIFQMARALINDGAIGQIRHVNSSVIFSSRADPQRPWNWWSDKEQAGGAWGAIGSHQ
HHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHH
IDMLRWLCGDFSSIRASLHTFVTERPLDDQLLPVTSDDFATAQVRLANGGFASIMISGVA
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
ALNENDRMIIHGEHGAIKIEGARLWHAERDGEWQERTPAHTVAIPSEISGNFPVGTVYLG
EECCCCEEEEECCCCEEEEECEEEEECCCCCCHHHCCCCEEEECCHHCCCCCCEEEEEHH
HALKAYSRGQLDALEQAATFSDGLLTQSLLDAAHRSDENDGGWITI
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEC
>Mature Secondary Structure
MKIAIIGTGWGARVQVPAFRSAGLKIVGIAAQNYEKTQREAATLNVEAFEHWRDLLSSDA
CEEEEEECCCCCEEECCCHHHCCEEEEEEECCCHHHHHHHHHEEEHHHHHHHHHHHCCCC
DLISIVTPPGTHCEISVAALEAGKHVLCEKPTALNVLEAQTMLEAAQAHPEQLSLIDHEL
CEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
RFLPIFQMARALINDGAIGQIRHVNSSVIFSSRADPQRPWNWWSDKEQAGGAWGAIGSHQ
HHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHH
IDMLRWLCGDFSSIRASLHTFVTERPLDDQLLPVTSDDFATAQVRLANGGFASIMISGVA
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
ALNENDRMIIHGEHGAIKIEGARLWHAERDGEWQERTPAHTVAIPSEISGNFPVGTVYLG
EECCCCEEEEECCCCEEEEECEEEEECCCCCCHHHCCCCEEEECCHHCCCCCCEEEEEHH
HALKAYSRGQLDALEQAATFSDGLLTQSLLDAAHRSDENDGGWITI
HHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]