| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is aroA
Identifier: 159897499
GI number: 159897499
Start: 1112376
End: 1113671
Strand: Direct
Name: aroA
Synonym: Haur_0970
Alternate gene names: 159897499
Gene position: 1112376-1113671 (Clockwise)
Preceding gene: 159897498
Following gene: 159897500
Centisome position: 17.53
GC content: 54.78
Gene sequence:
>1296_bases ATGAAACAGACAGTTAGTCATGCCAAGCGCCTGCGCGGGGCAATTAGCGTCCCAGGTGATAAATCGATCTCGCATCGCTC GGTGTTATTTAATGCTTTAGCCGAGGGCAACGCCGAAATTACGGGGTTCTTGCCAGGCGCTGATTGTCTTTCGTCAATCG CTTGTTTGCGCCAAATGGGCGTTGAAATTGAACACAGCGACGATAAGGTACGGGTGTTCGGGCGGGGTTTGCGTGGCCTG CGTGAGCCAAGCGACGTTTTAGATTGTGGTAATTCGGGTACAACGCTCCGTTTGTTGGCAGGTTTATTGGCTGGTCAGCC ATTTTTGAGCGTGCTAACTGGCGATGCGTCGTTGCGTTCACGCCCTCAGAAACGCATTGTTGAACCATTACGCCAACTAG GAGCCAAGCTCGATGGCCGCGATAACGGCAACCGTGCACCCTTGGTGATTCGTGGCACAACCATTCATGGTGGCAACTAT GAATTGCCGATCGCCAGTGCTCAAGTTAAATCGGCCTTGCTCTTGGCTGGTTTAACTGGCGATGCGCCAATGCGTTTATC GGGCAAAATCGTTAGCCGCGACCATACCGAGCGCATGTTGATCGCCATGGGAATTGATCTCACCGTTAAAGATGATGAGA TTGTGCTCTATCCACCGAGCCATCCGGTTTTCCCCTATCCGCTTTCGTTGCATGTTCCAGGCGATCCTTCGTCGGCAACC TTTTGGTGGGTAGCCGCAGCGATTCACCCCGATGCCGAAATTACCACCTTGGGCGTTGGATTAAACCCCAGTCGCACTGG AGCGCTCGATGTGCTCAAGGCCATGGGCGCTGATATTACGATCAGCAATGAGCGCAATGAAGGTGCAGAGCCTGTTGGCG ATGTAACCGTGCGTGGCGGTGGCTTACGAGGCACACGCATCGATGGCGATTTAATTCCGCGTTTGATCGATGAAATTCCG GTGCTGGCGGTGGCGGCAGCCTGTGCAGTTGGCGAAACCGTGGTTGCCGATGCCGAAGAACTGCGGGCCAAAGAAACCGA TCGGGTAGCCACAGTGGTTAGCGAACTAACAGCCATGGGTGCGACCCTCGAAGCCACACCCGATGGCATGATCATCGCTG GTGGTGGCGAACTCCAAGGCGCTCACGTTCAATCGCATGGTGATCATCGCATCGCGATGGCCTTGGCGGTGGCTGGCTTA GTGGCCGAAGGCGAAACGATTATCGACGAAGCTGAAGCCGTGACCGTCTCGTACCCAACATTCTGGCAGCATTACGCGCA GATCAAAGAAGCCTGA
Upstream 100 bases:
>100_bases CTAACCAGCGCTGTGCGCCAAGAACAATTGGTTGCCGCCCTCGCCCGCTTTGAACAGCATATGGGGCTGCCCCCCGCTGC GCTACAGGAGTCAACGCCCG
Downstream 100 bases:
>100_bases TCGCGCCGATAGCCCAACAAGGAGGTTGTGCATGTTTCGTTCAGATCTGCTCAAAGACAAAGTGATCATCATCACTGGTG GGGGTTCGGGCTTGGGGCGT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKQTVSHAKRLRGAISVPGDKSISHRSVLFNALAEGNAEITGFLPGADCLSSIACLRQMGVEIEHSDDKVRVFGRGLRGL REPSDVLDCGNSGTTLRLLAGLLAGQPFLSVLTGDASLRSRPQKRIVEPLRQLGAKLDGRDNGNRAPLVIRGTTIHGGNY ELPIASAQVKSALLLAGLTGDAPMRLSGKIVSRDHTERMLIAMGIDLTVKDDEIVLYPPSHPVFPYPLSLHVPGDPSSAT FWWVAAAIHPDAEITTLGVGLNPSRTGALDVLKAMGADITISNERNEGAEPVGDVTVRGGGLRGTRIDGDLIPRLIDEIP VLAVAAACAVGETVVADAEELRAKETDRVATVVSELTAMGATLEATPDGMIIAGGGELQGAHVQSHGDHRIAMALAVAGL VAEGETIIDEAEAVTVSYPTFWQHYAQIKEA
Sequences:
>Translated_431_residues MKQTVSHAKRLRGAISVPGDKSISHRSVLFNALAEGNAEITGFLPGADCLSSIACLRQMGVEIEHSDDKVRVFGRGLRGL REPSDVLDCGNSGTTLRLLAGLLAGQPFLSVLTGDASLRSRPQKRIVEPLRQLGAKLDGRDNGNRAPLVIRGTTIHGGNY ELPIASAQVKSALLLAGLTGDAPMRLSGKIVSRDHTERMLIAMGIDLTVKDDEIVLYPPSHPVFPYPLSLHVPGDPSSAT FWWVAAAIHPDAEITTLGVGLNPSRTGALDVLKAMGADITISNERNEGAEPVGDVTVRGGGLRGTRIDGDLIPRLIDEIP VLAVAAACAVGETVVADAEELRAKETDRVATVVSELTAMGATLEATPDGMIIAGGGELQGAHVQSHGDHRIAMALAVAGL VAEGETIIDEAEAVTVSYPTFWQHYAQIKEA >Mature_431_residues MKQTVSHAKRLRGAISVPGDKSISHRSVLFNALAEGNAEITGFLPGADCLSSIACLRQMGVEIEHSDDKVRVFGRGLRGL REPSDVLDCGNSGTTLRLLAGLLAGQPFLSVLTGDASLRSRPQKRIVEPLRQLGAKLDGRDNGNRAPLVIRGTTIHGGNY ELPIASAQVKSALLLAGLTGDAPMRLSGKIVSRDHTERMLIAMGIDLTVKDDEIVLYPPSHPVFPYPLSLHVPGDPSSAT FWWVAAAIHPDAEITTLGVGLNPSRTGALDVLKAMGADITISNERNEGAEPVGDVTVRGGGLRGTRIDGDLIPRLIDEIP VLAVAAACAVGETVVADAEELRAKETDRVATVVSELTAMGATLEATPDGMIIAGGGELQGAHVQSHGDHRIAMALAVAGL VAEGETIIDEAEAVTVSYPTFWQHYAQIKEA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=439, Percent_Identity=29.8405466970387, Blast_Score=138, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6320332, Length=431, Percent_Identity=28.538283062645, Blast_Score=112, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_HERA2 (A9AZ72)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001543746.1 - ProteinModelPortal: A9AZ72 - SMR: A9AZ72 - GeneID: 5732856 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_0970 - HOGENOM: HBG646626 - OMA: LSRNHTE - ProtClustDB: PRK02427 - BioCyc: HAUR316274:HAUR_0970-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45381; Mature: 45381
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTVSHAKRLRGAISVPGDKSISHRSVLFNALAEGNAEITGFLPGADCLSSIACLRQMG CCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHC VEIEHSDDKVRVFGRGLRGLREPSDVLDCGNSGTTLRLLAGLLAGQPFLSVLTGDASLRS CEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCHHHHEECCHHHHC RPQKRIVEPLRQLGAKLDGRDNGNRAPLVIRGTTIHGGNYELPIASAQVKSALLLAGLTG CCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCHHHHHHEEEEEECCC DAPMRLSGKIVSRDHTERMLIAMGIDLTVKDDEIVLYPPSHPVFPYPLSLHVPGDPSSAT CCCCEECCEEECCCCCCEEEEEECCEEEEECCEEEEECCCCCCCCCCEEEECCCCCCCCE FWWVAAAIHPDAEITTLGVGLNPSRTGALDVLKAMGADITISNERNEGAEPVGDVTVRGG EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECC GLRGTRIDGDLIPRLIDEIPVLAVAAACAVGETVVADAEELRAKETDRVATVVSELTAMG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC ATLEATPDGMIIAGGGELQGAHVQSHGDHRIAMALAVAGLVAEGETIIDEAEAVTVSYPT CEEEECCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEECCH FWQHYAQIKEA HHHHHHHHHCC >Mature Secondary Structure MKQTVSHAKRLRGAISVPGDKSISHRSVLFNALAEGNAEITGFLPGADCLSSIACLRQMG CCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHC VEIEHSDDKVRVFGRGLRGLREPSDVLDCGNSGTTLRLLAGLLAGQPFLSVLTGDASLRS CEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCHHHHEECCHHHHC RPQKRIVEPLRQLGAKLDGRDNGNRAPLVIRGTTIHGGNYELPIASAQVKSALLLAGLTG CCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCHHHHHHEEEEEECCC DAPMRLSGKIVSRDHTERMLIAMGIDLTVKDDEIVLYPPSHPVFPYPLSLHVPGDPSSAT CCCCEECCEEECCCCCCEEEEEECCEEEEECCEEEEECCCCCCCCCCEEEECCCCCCCCE FWWVAAAIHPDAEITTLGVGLNPSRTGALDVLKAMGADITISNERNEGAEPVGDVTVRGG EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECC GLRGTRIDGDLIPRLIDEIPVLAVAAACAVGETVVADAEELRAKETDRVATVVSELTAMG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC ATLEATPDGMIIAGGGELQGAHVQSHGDHRIAMALAVAGLVAEGETIIDEAEAVTVSYPT CEEEECCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEECCH FWQHYAQIKEA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA