| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897495
Identifier: 159897495
GI number: 159897495
Start: 1107370
End: 1109499
Strand: Reverse
Name: 159897495
Synonym: Haur_0966
Alternate gene names: NA
Gene position: 1109499-1107370 (Counterclockwise)
Preceding gene: 159897496
Following gene: 159897491
Centisome position: 17.48
GC content: 52.25
Gene sequence:
>2130_bases ATGCAAACCAAACGTTCGTTGATCGCTATCGGGTTGGCGCTCGCTATCGCCTTGTTGAGTGTGTTTGCGGCTAGTAGCCT CACACCATCCAGCGCGGCATCGTCGTCCGATGGGCTATGGCAAGACGTTGCTGAACAACGGATTCAGCAAAAAGGCCAAC GTGATATCGTGCCGTTGGTCTACCGCACGGTCAGCCTCGACCTCGCAGGTTTGAGCCAGCGTTTAGATCAAGCACCCTTG GAAAGTGCTGTGCAGGTACAGCAATCAGCATTTTTGTTGAGCTTACCGCTGCCAAGCGGCCAATTTCGCCAATTTCGGGT GGTCGAATCGCCAATTATGGAGCCTGCGCTGGCGGCAAAGTTCCCTGAATTGCGCACCTACTTGGCACAAGGCTACGACG ACCCCGAAATGGTTGCACGGCTTGATCTTACGCCAAGCGGCTTTCATGGTTTGATCTTGGCTCCGGAAGGGCGCTATTTT ATCGACCCCTACAGCCGCAACGATACTGGCAATTATATTGTCTATGATAGCCGTAATTTTGTGGCCGACCCCAGCAAACT CGCCAGCAAAGGCAAGACCGATTATGTTGGCGAAACTCCCATCACCAACCCATTCCCTGAGCGCTATAGCATTGGCGAAA CCTTGCGCACCTATCGCCTCGCCATGGCTGCTACAGGCGAATACACCAGTTTTCATGGTGGCACGGTCAATGGAGCAATG GCAGCAATCGTAACTAGCGTCAATCGCGTTAATACCGTTTACGAACGCGATATCTCGGTACGTATGGTGTTGGTTGCCAA CAATAACTTAATTGTGTATACCAATGGCGGCACTGACCCCTACACCAACGACGATGGCTTTGAGATGCTGGGCGAGAATC AAACTAACCTCACCAGCGTGATTGGTAACGCCAATTATGATATTGGTCACGTATTCAGCACTGGTGGTGGCGGGGTTGCC GCACTTGGCTCAGTCTGTGTCTCAGGCTCAAAAGCTGAAGGTGTGACGGGTTCACCAGCTCCGGTTGGCGATCCTTTTGA CATTGATTATGTCGCCCACGAAGTTGGTCACCAATTCGCAGGTAACCACACCTTCAACGGTACAACTAACGCCTGTGGCG GTGGCAATCGTGAAGGCCCAGCCGCCTACGAACCAGGCAGCGGCTCAACCATTATGGCCTATGCTGGGATTTGTGGCTCG GAAAATCTGCAACCCAACAGTGATCCATATTTCCATGTGAAAAGCTTGGAAGAAATGAGCGCCTTTATTACAACTGGTGC TGGCGCAAGCTGTGGTACCACGGCGGCCACTGGCAACACGCCACCAACCGCTAACGCTGGCGCAGATTTCACGATTCCTG CCAATACGCCGTTTGAATTAACTGGCAGCGGCAACGATGTGAACGGCGATAGCCTGACTTACAATTGGGAGCAATACGAT TTAGGTTCAGCATCGCCACCGAATACTGATAACGGCAATCGCCCAATTTTCCGTAGTTTCGATTCAACCACTTCGACCAG CCGTAGCTTCCCACGCTTGACCAATATTTTGAACAACTCGACGACGATTGGTGAATCGATGGCAACGACCAATCGCACCA TGAATTTCCGCCTAACCGTCCGTGATAATCGGGCTGGTGGCGGTGGTTATGGCTTGGATACAGCACGAGTTACAACCGTC AATACTGCTGGCCCCTTCCAAGTAACCGCGCCAAACACCGCCGTAACCTGGGCTGGCTTCAGCAGCCAAAGCGTTACTTG GAATGTTGCCAACACGACTGCTGCACCAGTCAATTGTAGCAATGTCAATATTTTGTTCTCAAGCAATGGTGGTACGAGCT TTAGCCCAGTGCTGAGCAACACGCCTAATGATGGCAGCGAGAGCATCACCGTACCAAACGTTGCTACCACAACTGGTCGG ATCAAAGTGCAATGTGCTGGCAATGTTTTCTTTGATATTGGCAACGCCAACTTCACGGTAACCGCCAGCAATGCCACGGT CACGCCAACCAGCGATGCCACGGCAACCCCAACCATTACGCCAACGGCAACCGCAACGGTTACCCCAAGCGTAACAGCTA CCCCAAGTACATCAATGGTCTACTTGCCAGTAGCCATGAAACAACCCTAA
Upstream 100 bases:
>100_bases TTTGTTTTGGTTGAATAAGGTGTGATGTAATTCACCTTTTCCTTAATCGTAGCCAACCGCTATAATGAACCACGCTGTGT TTAGCGGAAAAGGATGGATT
Downstream 100 bases:
>100_bases AAATCCGAACACGGCCTACTTAAAATTTCAGGTAGGCCGTGTCCTCCACACAGGATTATAGAGCGTTGAGCTAGCTAAAC CACCATTTAGGCGTGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 709; Mature: 709
Protein sequence:
>709_residues MQTKRSLIAIGLALAIALLSVFAASSLTPSSAASSSDGLWQDVAEQRIQQKGQRDIVPLVYRTVSLDLAGLSQRLDQAPL ESAVQVQQSAFLLSLPLPSGQFRQFRVVESPIMEPALAAKFPELRTYLAQGYDDPEMVARLDLTPSGFHGLILAPEGRYF IDPYSRNDTGNYIVYDSRNFVADPSKLASKGKTDYVGETPITNPFPERYSIGETLRTYRLAMAATGEYTSFHGGTVNGAM AAIVTSVNRVNTVYERDISVRMVLVANNNLIVYTNGGTDPYTNDDGFEMLGENQTNLTSVIGNANYDIGHVFSTGGGGVA ALGSVCVSGSKAEGVTGSPAPVGDPFDIDYVAHEVGHQFAGNHTFNGTTNACGGGNREGPAAYEPGSGSTIMAYAGICGS ENLQPNSDPYFHVKSLEEMSAFITTGAGASCGTTAATGNTPPTANAGADFTIPANTPFELTGSGNDVNGDSLTYNWEQYD LGSASPPNTDNGNRPIFRSFDSTTSTSRSFPRLTNILNNSTTIGESMATTNRTMNFRLTVRDNRAGGGGYGLDTARVTTV NTAGPFQVTAPNTAVTWAGFSSQSVTWNVANTTAAPVNCSNVNILFSSNGGTSFSPVLSNTPNDGSESITVPNVATTTGR IKVQCAGNVFFDIGNANFTVTASNATVTPTSDATATPTITPTATATVTPSVTATPSTSMVYLPVAMKQP
Sequences:
>Translated_709_residues MQTKRSLIAIGLALAIALLSVFAASSLTPSSAASSSDGLWQDVAEQRIQQKGQRDIVPLVYRTVSLDLAGLSQRLDQAPL ESAVQVQQSAFLLSLPLPSGQFRQFRVVESPIMEPALAAKFPELRTYLAQGYDDPEMVARLDLTPSGFHGLILAPEGRYF IDPYSRNDTGNYIVYDSRNFVADPSKLASKGKTDYVGETPITNPFPERYSIGETLRTYRLAMAATGEYTSFHGGTVNGAM AAIVTSVNRVNTVYERDISVRMVLVANNNLIVYTNGGTDPYTNDDGFEMLGENQTNLTSVIGNANYDIGHVFSTGGGGVA ALGSVCVSGSKAEGVTGSPAPVGDPFDIDYVAHEVGHQFAGNHTFNGTTNACGGGNREGPAAYEPGSGSTIMAYAGICGS ENLQPNSDPYFHVKSLEEMSAFITTGAGASCGTTAATGNTPPTANAGADFTIPANTPFELTGSGNDVNGDSLTYNWEQYD LGSASPPNTDNGNRPIFRSFDSTTSTSRSFPRLTNILNNSTTIGESMATTNRTMNFRLTVRDNRAGGGGYGLDTARVTTV NTAGPFQVTAPNTAVTWAGFSSQSVTWNVANTTAAPVNCSNVNILFSSNGGTSFSPVLSNTPNDGSESITVPNVATTTGR IKVQCAGNVFFDIGNANFTVTASNATVTPTSDATATPTITPTATATVTPSVTATPSTSMVYLPVAMKQP >Mature_709_residues MQTKRSLIAIGLALAIALLSVFAASSLTPSSAASSSDGLWQDVAEQRIQQKGQRDIVPLVYRTVSLDLAGLSQRLDQAPL ESAVQVQQSAFLLSLPLPSGQFRQFRVVESPIMEPALAAKFPELRTYLAQGYDDPEMVARLDLTPSGFHGLILAPEGRYF IDPYSRNDTGNYIVYDSRNFVADPSKLASKGKTDYVGETPITNPFPERYSIGETLRTYRLAMAATGEYTSFHGGTVNGAM AAIVTSVNRVNTVYERDISVRMVLVANNNLIVYTNGGTDPYTNDDGFEMLGENQTNLTSVIGNANYDIGHVFSTGGGGVA ALGSVCVSGSKAEGVTGSPAPVGDPFDIDYVAHEVGHQFAGNHTFNGTTNACGGGNREGPAAYEPGSGSTIMAYAGICGS ENLQPNSDPYFHVKSLEEMSAFITTGAGASCGTTAATGNTPPTANAGADFTIPANTPFELTGSGNDVNGDSLTYNWEQYD LGSASPPNTDNGNRPIFRSFDSTTSTSRSFPRLTNILNNSTTIGESMATTNRTMNFRLTVRDNRAGGGGYGLDTARVTTV NTAGPFQVTAPNTAVTWAGFSSQSVTWNVANTTAAPVNCSNVNILFSSNGGTSFSPVLSNTPNDGSESITVPNVATTTGR IKVQCAGNVFFDIGNANFTVTASNATVTPTSDATATPTITPTATATVTPSVTATPSTSMVYLPVAMKQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74409; Mature: 74409
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKRSLIAIGLALAIALLSVFAASSLTPSSAASSSDGLWQDVAEQRIQQKGQRDIVPLV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH YRTVSLDLAGLSQRLDQAPLESAVQVQQSAFLLSLPLPSGQFRQFRVVESPIMEPALAAK HEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEHHCCCCCHHHHHC FPELRTYLAQGYDDPEMVARLDLTPSGFHGLILAPEGRYFIDPYSRNDTGNYIVYDSRNF CHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCEEEECCCCC VADPSKLASKGKTDYVGETPITNPFPERYSIGETLRTYRLAMAATGEYTSFHGGTVNGAM CCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHH AAIVTSVNRVNTVYERDISVRMVLVANNNLIVYTNGGTDPYTNDDGFEMLGENQTNLTSV HHHHHHHHHHHHHEECCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHCCCCCCCCHHHH IGNANYDIGHVFSTGGGGVAALGSVCVSGSKAEGVTGSPAPVGDPFDIDYVAHEVGHQFA HCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GNHTFNGTTNACGGGNREGPAAYEPGSGSTIMAYAGICGSENLQPNSDPYFHVKSLEEMS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHH AFITTGAGASCGTTAATGNTPPTANAGADFTIPANTPFELTGSGNDVNGDSLTYNWEQYD HHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCEEEECHHCC LGSASPPNTDNGNRPIFRSFDSTTSTSRSFPRLTNILNNSTTIGESMATTNRTMNFRLTV CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEEEEE RDNRAGGGGYGLDTARVTTVNTAGPFQVTAPNTAVTWAGFSSQSVTWNVANTTAAPVNCS EECCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCCCEEEEECCCEECCCCCC NVNILFSSNGGTSFSPVLSNTPNDGSESITVPNVATTTGRIKVQCAGNVFFDIGNANFTV CEEEEEECCCCCEECHHHCCCCCCCCCEEECCCEEECCCEEEEEECCEEEEEECCCEEEE TASNATVTPTSDATATPTITPTATATVTPSVTATPSTSMVYLPVAMKQP EECCEEECCCCCCCCCCEECCCCEEEECCCEECCCCCCEEEEEEECCCC >Mature Secondary Structure MQTKRSLIAIGLALAIALLSVFAASSLTPSSAASSSDGLWQDVAEQRIQQKGQRDIVPLV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH YRTVSLDLAGLSQRLDQAPLESAVQVQQSAFLLSLPLPSGQFRQFRVVESPIMEPALAAK HEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEHHCCCCCHHHHHC FPELRTYLAQGYDDPEMVARLDLTPSGFHGLILAPEGRYFIDPYSRNDTGNYIVYDSRNF CHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCEEEECCCCC VADPSKLASKGKTDYVGETPITNPFPERYSIGETLRTYRLAMAATGEYTSFHGGTVNGAM CCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHH AAIVTSVNRVNTVYERDISVRMVLVANNNLIVYTNGGTDPYTNDDGFEMLGENQTNLTSV HHHHHHHHHHHHHEECCCEEEEEEEECCCEEEEECCCCCCCCCCCCHHCCCCCCCCHHHH IGNANYDIGHVFSTGGGGVAALGSVCVSGSKAEGVTGSPAPVGDPFDIDYVAHEVGHQFA HCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GNHTFNGTTNACGGGNREGPAAYEPGSGSTIMAYAGICGSENLQPNSDPYFHVKSLEEMS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHH AFITTGAGASCGTTAATGNTPPTANAGADFTIPANTPFELTGSGNDVNGDSLTYNWEQYD HHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCEEEECHHCC LGSASPPNTDNGNRPIFRSFDSTTSTSRSFPRLTNILNNSTTIGESMATTNRTMNFRLTV CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEEEEE RDNRAGGGGYGLDTARVTTVNTAGPFQVTAPNTAVTWAGFSSQSVTWNVANTTAAPVNCS EECCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCCCEEEEECCCEECCCCCC NVNILFSSNGGTSFSPVLSNTPNDGSESITVPNVATTTGRIKVQCAGNVFFDIGNANFTV CEEEEEECCCCCEECHHHCCCCCCCCCEEECCCEEECCCEEEEEECCEEEEEECCCEEEE TASNATVTPTSDATATPTITPTATATVTPSVTATPSTSMVYLPVAMKQP EECCEEECCCCCCCCCCEECCCCEEEECCCEECCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA