| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897496
Identifier: 159897496
GI number: 159897496
Start: 1109582
End: 1109923
Strand: Reverse
Name: 159897496
Synonym: Haur_0967
Alternate gene names: NA
Gene position: 1109923-1109582 (Counterclockwise)
Preceding gene: 159897505
Following gene: 159897495
Centisome position: 17.49
GC content: 42.11
Gene sequence:
>342_bases ATGGGTGCATTTAACACATTACATTTGCAAGCACCATGTTTGAGTTGTGGGGTCGAAATTCCGCTAGTGTTGCAATTTAA ATATGCCGAAAATTGGCAACACGAGTATAAACTCAATGACCAATTGCGTTGGAATCATCGTTATCGTCGTGCTAACGATG GCAAACCTGGTATGACGCATGTCGTTGTGTCTGCAATTGCCGAAACTTGCCCATTGTGTCAGTATGACGGCGATGATTAT CTGATTCACGTGTATAACGATGTGCTGACCAGCGTTGAGCTTGATGATCAGCGCTATAATTTTCAGAACTCCGAGGGCTA TTTTTTTGTTTTGGTTGAATAA
Upstream 100 bases:
>100_bases AAAATTTTCTTAATGAATGCAGGTAATTCTAAAAAATTACTTAAAATAATTGTACCTAAATCAAAGAGAAGTTATTGATT AACCGAAGGGAGTATAAACT
Downstream 100 bases:
>100_bases GGTGTGATGTAATTCACCTTTTCCTTAATCGTAGCCAACCGCTATAATGAACCACGCTGTGTTTAGCGGAAAAGGATGGA TTATGCAAACCAAACGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MGAFNTLHLQAPCLSCGVEIPLVLQFKYAENWQHEYKLNDQLRWNHRYRRANDGKPGMTHVVVSAIAETCPLCQYDGDDY LIHVYNDVLTSVELDDQRYNFQNSEGYFFVLVE
Sequences:
>Translated_113_residues MGAFNTLHLQAPCLSCGVEIPLVLQFKYAENWQHEYKLNDQLRWNHRYRRANDGKPGMTHVVVSAIAETCPLCQYDGDDY LIHVYNDVLTSVELDDQRYNFQNSEGYFFVLVE >Mature_112_residues GAFNTLHLQAPCLSCGVEIPLVLQFKYAENWQHEYKLNDQLRWNHRYRRANDGKPGMTHVVVSAIAETCPLCQYDGDDYL IHVYNDVLTSVELDDQRYNFQNSEGYFFVLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13191; Mature: 13060
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAFNTLHLQAPCLSCGVEIPLVLQFKYAENWQHEYKLNDQLRWNHRYRRANDGKPGMTH CCCCCEEEEECCHHHCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCCCCCCCCCHHH VVVSAIAETCPLCQYDGDDYLIHVYNDVLTSVELDDQRYNFQNSEGYFFVLVE HHHHHHHHHCCCEEECCCCEEEEEECHHHHEEEECCCCCCCCCCCCEEEEEEC >Mature Secondary Structure GAFNTLHLQAPCLSCGVEIPLVLQFKYAENWQHEYKLNDQLRWNHRYRRANDGKPGMTH CCCCEEEEECCHHHCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCCCCCCCCCHHH VVVSAIAETCPLCQYDGDDYLIHVYNDVLTSVELDDQRYNFQNSEGYFFVLVE HHHHHHHHHCCCEEECCCCEEEEEECHHHHEEEECCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA