| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is osmC [H]
Identifier: 159897491
GI number: 159897491
Start: 1102747
End: 1103175
Strand: Reverse
Name: osmC [H]
Synonym: Haur_0962
Alternate gene names: 159897491
Gene position: 1103175-1102747 (Counterclockwise)
Preceding gene: 159897495
Following gene: 159897490
Centisome position: 17.38
GC content: 51.75
Gene sequence:
>429_bases ATGGCAGTACGTTCGGCTGAAGCAACATGGACTGGCTCTTTACGCGAAGGCGCAGGCTCGGTCAAAACTGGCAGTGGCGC AGTGGAAGGTAGCTACTCATTTCCTTCACGCTTTGAAGATGGCACTGGCACCAACCCCGAAGAATTGATTGCAGCCGCCC ACGCTGGTTGTTTTTCGATGGCATTGACTGCCGATCTCGGTCGCGGTGGCTTCGAGCCAAAGAGCGTTCACACGGTTGCC AAGGTTCATATCGAACGTGGCGATGCTGGCTTTAGCATCACCAAAATCGAATTGCACACCGAAGCCGATGTGCCAAACAT CGATGCTGCGGCGTTTGCCGAATTTGCTGAAAAGGCCAAAGTAAATTGCCCAATCTCAAAAGCCTTGGCAGCAGTTCCAA CCATTGAATTACACGCAACCTTGAAATAA
Upstream 100 bases:
>100_bases GAGGTGAGGGCATACCAAACACGATTATACCCAAACATCGCACACAATAGCAAAATTCTGTTACCATAGAGCCACGATTA AGTTATGGAGGATGATTCCT
Downstream 100 bases:
>100_bases GCTTGGCCTTGCTGCTTAGCTCAACGCGCCCGCTACTCAATTACTGAATAGCGGGCGTTGATGATTAAGCCTTAGAGAGA CGTTTATGCACTGGAGTGGC
Product: OsmC family protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAVRSAEATWTGSLREGAGSVKTGSGAVEGSYSFPSRFEDGTGTNPEELIAAAHAGCFSMALTADLGRGGFEPKSVHTVA KVHIERGDAGFSITKIELHTEADVPNIDAAAFAEFAEKAKVNCPISKALAAVPTIELHATLK
Sequences:
>Translated_142_residues MAVRSAEATWTGSLREGAGSVKTGSGAVEGSYSFPSRFEDGTGTNPEELIAAAHAGCFSMALTADLGRGGFEPKSVHTVA KVHIERGDAGFSITKIELHTEADVPNIDAAAFAEFAEKAKVNCPISKALAAVPTIELHATLK >Mature_141_residues AVRSAEATWTGSLREGAGSVKTGSGAVEGSYSFPSRFEDGTGTNPEELIAAAHAGCFSMALTADLGRGGFEPKSVHTVAK VHIERGDAGFSITKIELHTEADVPNIDAAAFAEFAEKAKVNCPISKALAAVPTIELHATLK
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=136, Percent_Identity=48.5294117647059, Blast_Score=133, Evalue=5e-33,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 14702; Mature: 14570
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRSAEATWTGSLREGAGSVKTGSGAVEGSYSFPSRFEDGTGTNPEELIAAAHAGCFSM CCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHH ALTADLGRGGFEPKSVHTVAKVHIERGDAGFSITKIELHTEADVPNIDAAAFAEFAEKAK HHHHHCCCCCCCCCHHEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC VNCPISKALAAVPTIELHATLK CCCCHHHHHHHCCCEEEEEECC >Mature Secondary Structure AVRSAEATWTGSLREGAGSVKTGSGAVEGSYSFPSRFEDGTGTNPEELIAAAHAGCFSM CCCCCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHH ALTADLGRGGFEPKSVHTVAKVHIERGDAGFSITKIELHTEADVPNIDAAAFAEFAEKAK HHHHHCCCCCCCCCHHEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC VNCPISKALAAVPTIELHATLK CCCCHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]