| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897490
Identifier: 159897490
GI number: 159897490
Start: 1101531
End: 1102661
Strand: Reverse
Name: 159897490
Synonym: Haur_0961
Alternate gene names: NA
Gene position: 1102661-1101531 (Counterclockwise)
Preceding gene: 159897491
Following gene: 159897489
Centisome position: 17.37
GC content: 41.38
Gene sequence:
>1131_bases ATGCACTGGAGTGGCTGGATTATTCTGCTTGTGGTTACGTTAATCGGCGGCTGGTGGTTTTATCAACAATATCGGCATTT GAGAATTGAAGAGCAGACCCGCTATGCAGCACTTGAGCCTGACCCTGATCGGGTGATGCGTGAAAATTTGGATTATACGG TTGGCGACACCCATATTTTATTTATTTTCGCCCAACAAAATCAGGCAATTAAGCTGATTCAAGCCCAAAAATACGCTGAG GCCGAGGCAATTTACCAGCGCATTATGCACTATTATCAAAAATTCGACCCAGCCAATCAGGCCAATTTCTTAGTGGCCTT GCAACATTACGCAGTTATGTTGCTCGAACAAGGTGAAATCAGCAAAGCCGAACAGCACCTCAGAGATATTTTAGCCAAAC AAACTGCTTTACTTGGTGCTGATCACGATAATACCCTGAGTACCATCCAAAGCTTAGCGCAATGTATGACTGCCAGCGAA CGCTATGCCGAGGCCGAAACCTATTATCGCCAAATTATTCATAGCTTCGATGATTTAACCTCAGCTGATGATCTTAAAGG AGAGGTTTTATTTTTTAGCTTAATAGATTTTGCCAATTTTCTCATCGAGCGAAAATCATCTGAAGCATTGTTACAGTATC AACGTTTGCAGGAGCTACAAAAAATCTATTTTGCTGATCAAACAAAGTTTGAATATTATTTAAAAGAGCGTTTAGCATTT ACCCAATATGCAGTTATGGATAATCCTGAACTGGCAATCGAACAATATCGTAATTTATTAGACGAAATTATCAGTAAATA TGGCAAGAATAACAAGTATTATTTAAGGGTTGGCCATTTCTTCGCTGTAGTGCTTGATGAGACAGAGCAACATGCCGAAG CCTGTCAACTATTAGAGCAAATGTATCCTCATTTAACCGAACATTATCCTACCGATGATCCTTTTGTCTATCATGTGGCT TTTAACTACATTACCAGTTTGAGCCACAATCAGCAGCCCGAACCAGCCTTGGCAATTACCGATCAGTTGCTTGAGCAGCT TGAAGCACAAGAATCAACCAGTCCATGGCTTGAGCATTTTCAAGCACTGCGGCAACAACTGCTTGATCAAAAAGCCGCAG CAGCAGCTTGA
Upstream 100 bases:
>100_bases GCAACCTTGAAATAAGCTTGGCCTTGCTGCTTAGCTCAACGCGCCCGCTACTCAATTACTGAATAGCGGGCGTTGATGAT TAAGCCTTAGAGAGACGTTT
Downstream 100 bases:
>100_bases TTTAGTCCTTGCCAAAACCTGCCCCTTGTGAAATTTGGTGCAACATTGCAGCATTGTTAAAACCTCGCTATAATCATGAC GCAGTATGTCATAAACTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MHWSGWIILLVVTLIGGWWFYQQYRHLRIEEQTRYAALEPDPDRVMRENLDYTVGDTHILFIFAQQNQAIKLIQAQKYAE AEAIYQRIMHYYQKFDPANQANFLVALQHYAVMLLEQGEISKAEQHLRDILAKQTALLGADHDNTLSTIQSLAQCMTASE RYAEAETYYRQIIHSFDDLTSADDLKGEVLFFSLIDFANFLIERKSSEALLQYQRLQELQKIYFADQTKFEYYLKERLAF TQYAVMDNPELAIEQYRNLLDEIISKYGKNNKYYLRVGHFFAVVLDETEQHAEACQLLEQMYPHLTEHYPTDDPFVYHVA FNYITSLSHNQQPEPALAITDQLLEQLEAQESTSPWLEHFQALRQQLLDQKAAAAA
Sequences:
>Translated_376_residues MHWSGWIILLVVTLIGGWWFYQQYRHLRIEEQTRYAALEPDPDRVMRENLDYTVGDTHILFIFAQQNQAIKLIQAQKYAE AEAIYQRIMHYYQKFDPANQANFLVALQHYAVMLLEQGEISKAEQHLRDILAKQTALLGADHDNTLSTIQSLAQCMTASE RYAEAETYYRQIIHSFDDLTSADDLKGEVLFFSLIDFANFLIERKSSEALLQYQRLQELQKIYFADQTKFEYYLKERLAF TQYAVMDNPELAIEQYRNLLDEIISKYGKNNKYYLRVGHFFAVVLDETEQHAEACQLLEQMYPHLTEHYPTDDPFVYHVA FNYITSLSHNQQPEPALAITDQLLEQLEAQESTSPWLEHFQALRQQLLDQKAAAAA >Mature_376_residues MHWSGWIILLVVTLIGGWWFYQQYRHLRIEEQTRYAALEPDPDRVMRENLDYTVGDTHILFIFAQQNQAIKLIQAQKYAE AEAIYQRIMHYYQKFDPANQANFLVALQHYAVMLLEQGEISKAEQHLRDILAKQTALLGADHDNTLSTIQSLAQCMTASE RYAEAETYYRQIIHSFDDLTSADDLKGEVLFFSLIDFANFLIERKSSEALLQYQRLQELQKIYFADQTKFEYYLKERLAF TQYAVMDNPELAIEQYRNLLDEIISKYGKNNKYYLRVGHFFAVVLDETEQHAEACQLLEQMYPHLTEHYPTDDPFVYHVA FNYITSLSHNQQPEPALAITDQLLEQLEAQESTSPWLEHFQALRQQLLDQKAAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44077; Mature: 44077
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWSGWIILLVVTLIGGWWFYQQYRHLRIEEQTRYAALEPDPDRVMRENLDYTVGDTHIL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEECCCCCHHHHHHHCCCCEECCEEEE FIFAQQNQAIKLIQAQKYAEAEAIYQRIMHYYQKFDPANQANFLVALQHYAVMLLEQGEI EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH SKAEQHLRDILAKQTALLGADHDNTLSTIQSLAQCMTASERYAEAETYYRQIIHSFDDLT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SADDLKGEVLFFSLIDFANFLIERKSSEALLQYQRLQELQKIYFADQTKFEYYLKERLAF CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TQYAVMDNPELAIEQYRNLLDEIISKYGKNNKYYLRVGHFFAVVLDETEQHAEACQLLEQ HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEEEEECCHHHHHHHHHHHHH MYPHLTEHYPTDDPFVYHVAFNYITSLSHNQQPEPALAITDQLLEQLEAQESTSPWLEHF HHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH QALRQQLLDQKAAAAA HHHHHHHHHHHHHCCC >Mature Secondary Structure MHWSGWIILLVVTLIGGWWFYQQYRHLRIEEQTRYAALEPDPDRVMRENLDYTVGDTHIL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEECCCCCHHHHHHHCCCCEECCEEEE FIFAQQNQAIKLIQAQKYAEAEAIYQRIMHYYQKFDPANQANFLVALQHYAVMLLEQGEI EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH SKAEQHLRDILAKQTALLGADHDNTLSTIQSLAQCMTASERYAEAETYYRQIIHSFDDLT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SADDLKGEVLFFSLIDFANFLIERKSSEALLQYQRLQELQKIYFADQTKFEYYLKERLAF CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TQYAVMDNPELAIEQYRNLLDEIISKYGKNNKYYLRVGHFFAVVLDETEQHAEACQLLEQ HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEEEEECCHHHHHHHHHHHHH MYPHLTEHYPTDDPFVYHVAFNYITSLSHNQQPEPALAITDQLLEQLEAQESTSPWLEHF HHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH QALRQQLLDQKAAAAA HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA