| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897486
Identifier: 159897486
GI number: 159897486
Start: 1096941
End: 1098092
Strand: Reverse
Name: 159897486
Synonym: Haur_0957
Alternate gene names: NA
Gene position: 1098092-1096941 (Counterclockwise)
Preceding gene: 159897487
Following gene: 159897485
Centisome position: 17.3
GC content: 52.6
Gene sequence:
>1152_bases ATGCAAGCCCCTGCGAGCGTTATCAACCATGCCAAACTTCAAGCCACCTTTGGTCAAGCCAGCTTCGAACAACTCGTCCA AGCCACCTATCAGGGCGATCCATTAGCCGATGCAGTGATTGCTGAATTTGCTCAATGTGGGCGAACTGCCCGCCAAGTGC TACAAACCGGCTTGGTTGAAGGGCTGGCTCAGATTGAGGGCGATTTTCCGGCAATTCGCGCCTTTGTTGCTGCCGCCGAA AGCTTGCCCGCTTGGGTTGAAGTTTCACGGCTTGAACGCGGAGCACAAGCCTATTGCTCAATCGGCGTGCTTTGGCTAAC CTTGGCGCTCGGCCCAGGTTCGTTGGTGCATACCTACAGCGCTCCGACCATCGCCGATCTGTTGGTGCAAACAGGCGATC TTGAGCATATGGCGACCAAACGGATCATCGAAACGGGCACGTGGGGCATGGCGATCGCCATTCCACAGCAACTGCAACGC GGCGGCTTGGGCTACGTGCATAGTTTGCAAGTACGCTTGTTGCATGCCCAAATCCGCAGCGCCATGCTCAAACGCGGCTG GGATCAAACCAAAACGGGCTTGCCGATTAATCAGCTTGAAATGGTACGAACGTGGCTCGATTTTACCTATGTGCCATTTA CCGCGCTGGCACGTTTTGGTATCGATTTCACTGCCGCTGAATTAAGCGATTTGTATCATCTGTGGCGCTATATTGGCTAT TTACTAGGAATTGACCCCAGCATTTACCAGCATGTCGTCGATCAAGCCTCGGCAGCAGGTTTGTTGGCATGGGTTGATGG TAGTATGCAGCCGCCCAATGCTAACTCACGCCGTTTGACCGCCGCTATGATCCAAGCAGTGAGTGAATTGGTGCAACCGT TGATCAAGCGTTCGTTTAAATTTTCGTTTGCCTTGGTAACCGCGCTGACTCACCATTTTCATGGTCGCCAACTTTCGCAA CAACTGGGCATCAAACGTTCATGGATTAGCCTGCTGGTTCCATTGGTTGTTTTGGCAAATCGTTGGCAACGCCGTAAATT GCGCCGCAATCCCAACGCTTGGCAAACCCAAATTCAGGCTACCGCTGCCGATTTTCGCGAACGAGTGGTCAATGCCAACC CAACTGCCTATCAACCCAAAAAAGATGGCTAA
Upstream 100 bases:
>100_bases ATTTTGGGCTTCTCGTCACGCGAATTGAAATAGGCTTTACTATTGAGCACGTGCTGGTTTGCCAGTACGTGCTTTTTGAT TTTTAGCCAAGAGGTCGTCC
Downstream 100 bases:
>100_bases AATCAAATAGCTTGCATGTCACATTGCAGGCTACTCAATCGTCATAGCTCTAGAATGTTTTTTACAAACTGGAGTTAACG ATGCATACGCAAAAACCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MQAPASVINHAKLQATFGQASFEQLVQATYQGDPLADAVIAEFAQCGRTARQVLQTGLVEGLAQIEGDFPAIRAFVAAAE SLPAWVEVSRLERGAQAYCSIGVLWLTLALGPGSLVHTYSAPTIADLLVQTGDLEHMATKRIIETGTWGMAIAIPQQLQR GGLGYVHSLQVRLLHAQIRSAMLKRGWDQTKTGLPINQLEMVRTWLDFTYVPFTALARFGIDFTAAELSDLYHLWRYIGY LLGIDPSIYQHVVDQASAAGLLAWVDGSMQPPNANSRRLTAAMIQAVSELVQPLIKRSFKFSFALVTALTHHFHGRQLSQ QLGIKRSWISLLVPLVVLANRWQRRKLRRNPNAWQTQIQATAADFRERVVNANPTAYQPKKDG
Sequences:
>Translated_383_residues MQAPASVINHAKLQATFGQASFEQLVQATYQGDPLADAVIAEFAQCGRTARQVLQTGLVEGLAQIEGDFPAIRAFVAAAE SLPAWVEVSRLERGAQAYCSIGVLWLTLALGPGSLVHTYSAPTIADLLVQTGDLEHMATKRIIETGTWGMAIAIPQQLQR GGLGYVHSLQVRLLHAQIRSAMLKRGWDQTKTGLPINQLEMVRTWLDFTYVPFTALARFGIDFTAAELSDLYHLWRYIGY LLGIDPSIYQHVVDQASAAGLLAWVDGSMQPPNANSRRLTAAMIQAVSELVQPLIKRSFKFSFALVTALTHHFHGRQLSQ QLGIKRSWISLLVPLVVLANRWQRRKLRRNPNAWQTQIQATAADFRERVVNANPTAYQPKKDG >Mature_383_residues MQAPASVINHAKLQATFGQASFEQLVQATYQGDPLADAVIAEFAQCGRTARQVLQTGLVEGLAQIEGDFPAIRAFVAAAE SLPAWVEVSRLERGAQAYCSIGVLWLTLALGPGSLVHTYSAPTIADLLVQTGDLEHMATKRIIETGTWGMAIAIPQQLQR GGLGYVHSLQVRLLHAQIRSAMLKRGWDQTKTGLPINQLEMVRTWLDFTYVPFTALARFGIDFTAAELSDLYHLWRYIGY LLGIDPSIYQHVVDQASAAGLLAWVDGSMQPPNANSRRLTAAMIQAVSELVQPLIKRSFKFSFALVTALTHHFHGRQLSQ QLGIKRSWISLLVPLVVLANRWQRRKLRRNPNAWQTQIQATAADFRERVVNANPTAYQPKKDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42402; Mature: 42402
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAPASVINHAKLQATFGQASFEQLVQATYQGDPLADAVIAEFAQCGRTARQVLQTGLVE CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLAQIEGDFPAIRAFVAAAESLPAWVEVSRLERGAQAYCSIGVLWLTLALGPGSLVHTYS HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC APTIADLLVQTGDLEHMATKRIIETGTWGMAIAIPQQLQRGGLGYVHSLQVRLLHAQIRS CHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHH AMLKRGWDQTKTGLPINQLEMVRTWLDFTYVPFTALARFGIDFTAAELSDLYHLWRYIGY HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLGIDPSIYQHVVDQASAAGLLAWVDGSMQPPNANSRRLTAAMIQAVSELVQPLIKRSFK HHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSFALVTALTHHFHGRQLSQQLGIKRSWISLLVPLVVLANRWQRRKLRRNPNAWQTQIQA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TAADFRERVVNANPTAYQPKKDG HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQAPASVINHAKLQATFGQASFEQLVQATYQGDPLADAVIAEFAQCGRTARQVLQTGLVE CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLAQIEGDFPAIRAFVAAAESLPAWVEVSRLERGAQAYCSIGVLWLTLALGPGSLVHTYS HHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC APTIADLLVQTGDLEHMATKRIIETGTWGMAIAIPQQLQRGGLGYVHSLQVRLLHAQIRS CHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHH AMLKRGWDQTKTGLPINQLEMVRTWLDFTYVPFTALARFGIDFTAAELSDLYHLWRYIGY HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLGIDPSIYQHVVDQASAAGLLAWVDGSMQPPNANSRRLTAAMIQAVSELVQPLIKRSFK HHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSFALVTALTHHFHGRQLSQQLGIKRSWISLLVPLVVLANRWQRRKLRRNPNAWQTQIQA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TAADFRERVVNANPTAYQPKKDG HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA