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The map label for this gene is 159897471

Identifier: 159897471

GI number: 159897471

Start: 1078797

End: 1079306

Strand: Reverse

Name: 159897471

Synonym: Haur_0942

Alternate gene names: NA

Gene position: 1079306-1078797 (Counterclockwise)

Preceding gene: 159897472

Following gene: 159897470

Centisome position: 17.01

GC content: 51.76

Gene sequence:

>510_bases
ATGGCTCAACCAGCAAACGATTCAGCAATCATCGCCTTATTACAACGTGGCGATCAACAAACGTGGCGCATGCTGGCCGA
ACAGTGGTCAGGCGAGCTTTACAACTTGGCTTGGGGTGCAGTGTATCAGGCTGATCTCGCCCAAAACATTGTTAACAAGG
TTTGGGCCACCGCAATTCGCACCATCCACAGTGTTGATCAACGGCTAGGTCTGCGTTTATGGCTCTACACCATCAGCTGC
CATGTGATTCTTGATCATTGGCGCGATTATGGCCATACGCCGCAAACTGCTAGCCTGATTAGCGAGCTACAACATTTGCC
CGAAGCCATGCACTTGGCACTGTTGCTCCAGCTGCGCCACAATGAATCGGTTGCGATGATTGCTGAAATTCTTGGTCGCA
CCCAACGCGCCACTGAACAACTATTACAGCAAGGCCAGCAACGGCTCAAGCTTGCTGGGGCAGAGGAATTTTATGGCATC
AACCAAGCAGCAGCTGCAGCAGGCGATTAA

Upstream 100 bases:

>100_bases
TTAGCAATCCCGTAATGTCATTCTTCTACGATCACGTCAGCACAAATGCGCGACGTGATTCTTTTTGTTCAGTTTGTGCG
AAAGTGATGGGTATCAGCCA

Downstream 100 bases:

>100_bases
TCAGGCCTTGCCTGAACAACAGCTTAGCTATAGTCAACAACAGGTCATCAATCAAGCGCTTGAACAACAGCTGGAGCAAG
TTCGCCAGCTTCAGCCAACC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAQPANDSAIIALLQRGDQQTWRMLAEQWSGELYNLAWGAVYQADLAQNIVNKVWATAIRTIHSVDQRLGLRLWLYTISC
HVILDHWRDYGHTPQTASLISELQHLPEAMHLALLLQLRHNESVAMIAEILGRTQRATEQLLQQGQQRLKLAGAEEFYGI
NQAAAAAGD

Sequences:

>Translated_169_residues
MAQPANDSAIIALLQRGDQQTWRMLAEQWSGELYNLAWGAVYQADLAQNIVNKVWATAIRTIHSVDQRLGLRLWLYTISC
HVILDHWRDYGHTPQTASLISELQHLPEAMHLALLLQLRHNESVAMIAEILGRTQRATEQLLQQGQQRLKLAGAEEFYGI
NQAAAAAGD
>Mature_168_residues
AQPANDSAIIALLQRGDQQTWRMLAEQWSGELYNLAWGAVYQADLAQNIVNKVWATAIRTIHSVDQRLGLRLWLYTISCH
VILDHWRDYGHTPQTASLISELQHLPEAMHLALLLQLRHNESVAMIAEILGRTQRATEQLLQQGQQRLKLAGAEEFYGIN
QAAAAAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19005; Mature: 18874

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPANDSAIIALLQRGDQQTWRMLAEQWSGELYNLAWGAVYQADLAQNIVNKVWATAIR
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIHSVDQRLGLRLWLYTISCHVILDHWRDYGHTPQTASLISELQHLPEAMHLALLLQLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NESVAMIAEILGRTQRATEQLLQQGQQRLKLAGAEEFYGINQAAAAAGD
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
AQPANDSAIIALLQRGDQQTWRMLAEQWSGELYNLAWGAVYQADLAQNIVNKVWATAIR
CCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIHSVDQRLGLRLWLYTISCHVILDHWRDYGHTPQTASLISELQHLPEAMHLALLLQLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NESVAMIAEILGRTQRATEQLLQQGQQRLKLAGAEEFYGINQAAAAAGD
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA