Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897472

Identifier: 159897472

GI number: 159897472

Start: 1079407

End: 1079862

Strand: Reverse

Name: 159897472

Synonym: Haur_0943

Alternate gene names: NA

Gene position: 1079862-1079407 (Counterclockwise)

Preceding gene: 159897473

Following gene: 159897471

Centisome position: 17.01

GC content: 56.58

Gene sequence:

>456_bases
ATGTTGGATAATTGGTTGGGGCGCGATAAAGCATCGCCGCAAGCGCCCAAGGAGGAACCCATGAGTAGTAATGATGCGTC
ACGCCCAACGCCCCCACCACGCCAACCAGACGATGGCTTAATTCGCCGCCCACGCCCCAACGACCGCGATAATGCCTTTA
ATTTGGCGCTCGAAGATTTGCGCCGCCAAGTGCAGTTGCTCTACGAGAGCATTGGGGCACTGGCCGAACACTACAATGAA
ACTGGTGGCGATCCCCGCCGCGCCCGCGATTGCCGCGATTGTAGCCATTTTCGGGTTGGCTTACATGTGCCATGTGTGAT
GGGCGTTGATCCGCATACCGCCCCATATTTGGCGGTACGCTGCCCTAAATTTGAGGAAACCAGCGAAAATCGCAAGCTAA
TCAATCGCGATGAAGCTGGCTTTAATGCTGCGGTGCGGCGTGCTCGCGAAGGCTAG

Upstream 100 bases:

>100_bases
TCATCCCTCATCCTTCATCCTTCCCAAGTTTACCCCTTGTTGGTGAGTGCTAAAATACTGATTAATCACCAGTGCGAGCC
TATTGCCGAAGGAGCATGGC

Downstream 100 bases:

>100_bases
TTAGCAATCCCGTAATGTCATTCTTCTACGATCACGTCAGCACAAATGCGCGACGTGATTCTTTTTGTTCAGTTTGTGCG
AAAGTGATGGGTATCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLDNWLGRDKASPQAPKEEPMSSNDASRPTPPPRQPDDGLIRRPRPNDRDNAFNLALEDLRRQVQLLYESIGALAEHYNE
TGGDPRRARDCRDCSHFRVGLHVPCVMGVDPHTAPYLAVRCPKFEETSENRKLINRDEAGFNAAVRRAREG

Sequences:

>Translated_151_residues
MLDNWLGRDKASPQAPKEEPMSSNDASRPTPPPRQPDDGLIRRPRPNDRDNAFNLALEDLRRQVQLLYESIGALAEHYNE
TGGDPRRARDCRDCSHFRVGLHVPCVMGVDPHTAPYLAVRCPKFEETSENRKLINRDEAGFNAAVRRAREG
>Mature_151_residues
MLDNWLGRDKASPQAPKEEPMSSNDASRPTPPPRQPDDGLIRRPRPNDRDNAFNLALEDLRRQVQLLYESIGALAEHYNE
TGGDPRRARDCRDCSHFRVGLHVPCVMGVDPHTAPYLAVRCPKFEETSENRKLINRDEAGFNAAVRRAREG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17100; Mature: 17100

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNWLGRDKASPQAPKEEPMSSNDASRPTPPPRQPDDGLIRRPRPNDRDNAFNLALEDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RRQVQLLYESIGALAEHYNETGGDPRRARDCRDCSHFRVGLHVPCVMGVDPHTAPYLAVR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEEECCCCCCCCEEEEE
CPKFEETSENRKLINRDEAGFNAAVRRAREG
CCCCCCCCCHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLDNWLGRDKASPQAPKEEPMSSNDASRPTPPPRQPDDGLIRRPRPNDRDNAFNLALEDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RRQVQLLYESIGALAEHYNETGGDPRRARDCRDCSHFRVGLHVPCVMGVDPHTAPYLAVR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEEECCCCCCCCEEEEE
CPKFEETSENRKLINRDEAGFNAAVRRAREG
CCCCCCCCCHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA