| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897451
Identifier: 159897451
GI number: 159897451
Start: 1054456
End: 1057143
Strand: Direct
Name: 159897451
Synonym: Haur_0922
Alternate gene names: NA
Gene position: 1054456-1057143 (Clockwise)
Preceding gene: 159897450
Following gene: 159897452
Centisome position: 16.61
GC content: 51.53
Gene sequence:
>2688_bases ATGACTGATGTTTATCAATCAAGCATTGTGATCGCCGCTGATCAACCTGTCCAACCAACCTGGCAACCTGCTTCGCCCGT CTTGGTACGCTTGGCTGGAACAAGCTACAACCATTTACATAACCTAAAGTTTGAGCGCACGATTGGTCTGTTTCAAGTGA TTTTGCGCCAACAACGCTGGCTCGATAACCATACCCAGGCAATTGTTGATGTGCTCTACACATTAATTGGCACAACCCAG GGTTCGCTTAAAAGCAGCTTGGTGGCCCTAAAACGCGATATTTTCAATCGCCGTTTGCCCTTGCGCAGCGATGTCGCTAG CTTGCGCAATCTGGAGCATCCAAGCTTGCGCGGGCAGGTGCTGCGGTTTCGCCGCACCTTGCAGCAATTGCAACGGGCTT GGCGCGAGGCTCGGTTGGTGTTTGAACAAGAATTACAAGCCAAACGGCGTTTGTTGCAACAAAGCTATGCCCAGCCAGCC TTTCAAAAAGCGGTGCAAGTGGCTAGCTCAACCTTGGCTAGCAGCTTGCCGCGCTATATCAACGCCGATCCCAGCCAGTT GCGCAGCCGCGAACGCAAAACCGAAGTTGGAGCCTACCAATATCTGATGCGCATGGCCGGCAAAACCAGCCCATTTAGCC ATTTTGGCCCTTTGGTGCTCGGCTCGGCTGACCCAACATTGGCTCAACCGATTGTGATTGAAGGCCAAATGCCCCAAGCG CGGGCAGTCAGCCAACTGCGGCGCTCGGTGGTTGGCGCAATTCGCAATGCTTTGGTGCGCATTCCGGCAATCAAGGCTTA TTTGCCCTTGCGCTTGAATCCGAGTAGTTTTGTTGATGGCGAGAGTTTAGTTTTTTCGCGCTTGCGCCAACAACTTGATG ACCCCAACCAATATTTTGCTTCATGGCAACGCCGTGGTAAACGTTCGCTCTTGCTCGATAGTGTGTTAGCAGTTTTTGCC AACCAACAGCAATTGAGCTACGCCGAATTGTTGGAGCTTTTGCAAACCCAACATCCTGAGCTAAGCTCTGCCAAACTTGC CCAAACGATCAATCAATTGCTCACCAGCGGCCTGCTCTTTTACAATTTGGATTTGCCCTCAGATTATCGTGATCCAGTGC TGGTGTTGATTGAGCAATTAGCCGATGTTCCCTCGGCTGAGGCTGGGCAAATTCGTGAATTATTACAACGTTTGGCTGAA TCGGCGCAAGCCTATGCCCAAGCCACGGTTGCTCAACGTTGGCAGCTTGAGCAAAGCATGCGCCAAATCGTCGATCAGAT CTTGGCCTTTGCGCCCGAATTGAAGCAAACCAGCAGCCAACTTGGTCCGCTAATCGTTGAAGATGTAGTTTGGGATGACG TAGCGGTGCATTTGGGGCAGCCATTATTGGCAAGCTTGGCTAGCGATTTGGCTCCAGTTTTGGAGTGTGGTTTTCAGCGC GACGGGCGTGGCCCAGCCCAAAGTTGGCTGCTCGATATTTTCACCCATGCCTTTGGCGAAGGCGGCCAAACCGACACTAT TCTAGGCTTTGCGCCTGAATATAATCGGCTCTCGGCCAATTCTGGCGAGCTGCCAATGCCGCGCATTAACGCTATTCAAC AACGTCAACGCCGTTATGGCCAGTTTTTGCACCAAGCGCTTGATGCTGAGCGCGAAGCCCGAGAATGTGTGCTTGATCCC CATGCATTTTGGCAACTTGCCGCCGATTTTGGTCAACATAATCACTATGGCTCAACCAGTATTCAATTTCAGGTGGCCGC CAGTAGCCAAACAGCGCTTGAGCAAGGCGATTATTTGGTGGTGTTGAATTACACTTTGCCGGGCTTTGGGCGCTTCTTGA CGCGCTATTTGAGCTTATTGCCTGCGCCAAGCTGGCAAACCTATGTGCAATCGGCATGGCAACCATTGCATAACGACGCT CAAGCCGTGCCAGCCGAAATTGTTTCGGTGCTCGAACATAATGCCCAAGTTCATGTGCCATTTACGGCAAATGTGATTGT GCCGCCCGACGAGCCAAGCTATCGTTCGCAAGCGATTCAGCATGGCGTTGGCGATTTGAGCCTTGCCCACGATCCGGTTG CTGATCAATTACGAGTTTATCACCGCCACGCTGATGGCAGCCAACAAGAGCTTTTGCCCTTGTATATGGGCTTTTTGCAT ATGGTTTCGCTACCAATTTTGCAACGGGTGCTGGCCCAACTCAGCCCAAGCAGCTATCACATGGAGCAATTGCGACCGCG TGAGCAAACCTTGGTTTCGCGCAAGCAACCAACCAATGCCATCAGCCATACGCCACGCTTACGCATTGGCCGCTTGGTCT TGCAACGTGAAAGCTGGAATGTGCCAACTGCCGCGATTCCTAGCAGCGTCGCCAACGACGAATTTATGAGCTTTTTCAAT TGGTATAGCTGGGCGGAACAAGCAGGCCTGCCGAGCGAAGTGTTTGTACGCATCCAACGGCCACTTAGCAGCAAACATCT CAATATGTGGACCAACCACAAACCACTGGCGCTCGATTTCGAAAATTATTTCAGCATTCAGATGTTGCGCCATGTGATTG CTGATGATCAGGTTAGCTTGACGCTTGAAGAAATGCTGCCCAGCCCGCAGCAGCAGTGGTTTGATCTTGATCAACAACCC TATGTGATTGAATTTCAGGTTGAGTTTAATCGGGGAGGCAGCATATGA
Upstream 100 bases:
>100_bases TCTGGACGGTTTTCTTTATGTTCAACATCGGCTTTCATTTTGCCAGCTATGGCTTCACGATTCTGCGAATGTACGCCGCA GCACTATAAGGAGCATGGCC
Downstream 100 bases:
>100_bases GTTTGGCAGTGCTGAATGGCAAAATCTACTATAGCCCGCAGAATATCAGCGAGCCATATGATCCGAGAGCTGATCGATTG ATTGCTGAAGCATGGACTCC
Product: lantibiotic dehydratase domain-containing protein
Products: NA
Alternate protein names: Lantibiotic Dehydratase Domain Protein; Lanthionine Biosynthesis Protein
Number of amino acids: Translated: 895; Mature: 894
Protein sequence:
>895_residues MTDVYQSSIVIAADQPVQPTWQPASPVLVRLAGTSYNHLHNLKFERTIGLFQVILRQQRWLDNHTQAIVDVLYTLIGTTQ GSLKSSLVALKRDIFNRRLPLRSDVASLRNLEHPSLRGQVLRFRRTLQQLQRAWREARLVFEQELQAKRRLLQQSYAQPA FQKAVQVASSTLASSLPRYINADPSQLRSRERKTEVGAYQYLMRMAGKTSPFSHFGPLVLGSADPTLAQPIVIEGQMPQA RAVSQLRRSVVGAIRNALVRIPAIKAYLPLRLNPSSFVDGESLVFSRLRQQLDDPNQYFASWQRRGKRSLLLDSVLAVFA NQQQLSYAELLELLQTQHPELSSAKLAQTINQLLTSGLLFYNLDLPSDYRDPVLVLIEQLADVPSAEAGQIRELLQRLAE SAQAYAQATVAQRWQLEQSMRQIVDQILAFAPELKQTSSQLGPLIVEDVVWDDVAVHLGQPLLASLASDLAPVLECGFQR DGRGPAQSWLLDIFTHAFGEGGQTDTILGFAPEYNRLSANSGELPMPRINAIQQRQRRYGQFLHQALDAEREARECVLDP HAFWQLAADFGQHNHYGSTSIQFQVAASSQTALEQGDYLVVLNYTLPGFGRFLTRYLSLLPAPSWQTYVQSAWQPLHNDA QAVPAEIVSVLEHNAQVHVPFTANVIVPPDEPSYRSQAIQHGVGDLSLAHDPVADQLRVYHRHADGSQQELLPLYMGFLH MVSLPILQRVLAQLSPSSYHMEQLRPREQTLVSRKQPTNAISHTPRLRIGRLVLQRESWNVPTAAIPSSVANDEFMSFFN WYSWAEQAGLPSEVFVRIQRPLSSKHLNMWTNHKPLALDFENYFSIQMLRHVIADDQVSLTLEEMLPSPQQQWFDLDQQP YVIEFQVEFNRGGSI
Sequences:
>Translated_895_residues MTDVYQSSIVIAADQPVQPTWQPASPVLVRLAGTSYNHLHNLKFERTIGLFQVILRQQRWLDNHTQAIVDVLYTLIGTTQ GSLKSSLVALKRDIFNRRLPLRSDVASLRNLEHPSLRGQVLRFRRTLQQLQRAWREARLVFEQELQAKRRLLQQSYAQPA FQKAVQVASSTLASSLPRYINADPSQLRSRERKTEVGAYQYLMRMAGKTSPFSHFGPLVLGSADPTLAQPIVIEGQMPQA RAVSQLRRSVVGAIRNALVRIPAIKAYLPLRLNPSSFVDGESLVFSRLRQQLDDPNQYFASWQRRGKRSLLLDSVLAVFA NQQQLSYAELLELLQTQHPELSSAKLAQTINQLLTSGLLFYNLDLPSDYRDPVLVLIEQLADVPSAEAGQIRELLQRLAE SAQAYAQATVAQRWQLEQSMRQIVDQILAFAPELKQTSSQLGPLIVEDVVWDDVAVHLGQPLLASLASDLAPVLECGFQR DGRGPAQSWLLDIFTHAFGEGGQTDTILGFAPEYNRLSANSGELPMPRINAIQQRQRRYGQFLHQALDAEREARECVLDP HAFWQLAADFGQHNHYGSTSIQFQVAASSQTALEQGDYLVVLNYTLPGFGRFLTRYLSLLPAPSWQTYVQSAWQPLHNDA QAVPAEIVSVLEHNAQVHVPFTANVIVPPDEPSYRSQAIQHGVGDLSLAHDPVADQLRVYHRHADGSQQELLPLYMGFLH MVSLPILQRVLAQLSPSSYHMEQLRPREQTLVSRKQPTNAISHTPRLRIGRLVLQRESWNVPTAAIPSSVANDEFMSFFN WYSWAEQAGLPSEVFVRIQRPLSSKHLNMWTNHKPLALDFENYFSIQMLRHVIADDQVSLTLEEMLPSPQQQWFDLDQQP YVIEFQVEFNRGGSI >Mature_894_residues TDVYQSSIVIAADQPVQPTWQPASPVLVRLAGTSYNHLHNLKFERTIGLFQVILRQQRWLDNHTQAIVDVLYTLIGTTQG SLKSSLVALKRDIFNRRLPLRSDVASLRNLEHPSLRGQVLRFRRTLQQLQRAWREARLVFEQELQAKRRLLQQSYAQPAF QKAVQVASSTLASSLPRYINADPSQLRSRERKTEVGAYQYLMRMAGKTSPFSHFGPLVLGSADPTLAQPIVIEGQMPQAR AVSQLRRSVVGAIRNALVRIPAIKAYLPLRLNPSSFVDGESLVFSRLRQQLDDPNQYFASWQRRGKRSLLLDSVLAVFAN QQQLSYAELLELLQTQHPELSSAKLAQTINQLLTSGLLFYNLDLPSDYRDPVLVLIEQLADVPSAEAGQIRELLQRLAES AQAYAQATVAQRWQLEQSMRQIVDQILAFAPELKQTSSQLGPLIVEDVVWDDVAVHLGQPLLASLASDLAPVLECGFQRD GRGPAQSWLLDIFTHAFGEGGQTDTILGFAPEYNRLSANSGELPMPRINAIQQRQRRYGQFLHQALDAEREARECVLDPH AFWQLAADFGQHNHYGSTSIQFQVAASSQTALEQGDYLVVLNYTLPGFGRFLTRYLSLLPAPSWQTYVQSAWQPLHNDAQ AVPAEIVSVLEHNAQVHVPFTANVIVPPDEPSYRSQAIQHGVGDLSLAHDPVADQLRVYHRHADGSQQELLPLYMGFLHM VSLPILQRVLAQLSPSSYHMEQLRPREQTLVSRKQPTNAISHTPRLRIGRLVLQRESWNVPTAAIPSSVANDEFMSFFNW YSWAEQAGLPSEVFVRIQRPLSSKHLNMWTNHKPLALDFENYFSIQMLRHVIADDQVSLTLEEMLPSPQQQWFDLDQQPY VIEFQVEFNRGGSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101185; Mature: 101054
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVYQSSIVIAADQPVQPTWQPASPVLVRLAGTSYNHLHNLKFERTIGLFQVILRQQRW CCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHH LDNHTQAIVDVLYTLIGTTQGSLKSSLVALKRDIFNRRLPLRSDVASLRNLEHPSLRGQV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH LRFRRTLQQLQRAWREARLVFEQELQAKRRLLQQSYAQPAFQKAVQVASSTLASSLPRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHC NADPSQLRSRERKTEVGAYQYLMRMAGKTSPFSHFGPLVLGSADPTLAQPIVIEGQMPQA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCEEEECCCCHH RAVSQLRRSVVGAIRNALVRIPAIKAYLPLRLNPSSFVDGESLVFSRLRQQLDDPNQYFA HHHHHHHHHHHHHHHHHHHHCCHHHHEECEEECCCCCCCHHHHHHHHHHHHCCCHHHHHH SWQRRGKRSLLLDSVLAVFANQQQLSYAELLELLQTQHPELSSAKLAQTINQLLTSGLLF HHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEE YNLDLPSDYRDPVLVLIEQLADVPSAEAGQIRELLQRLAESAQAYAQATVAQRWQLEQSM EECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQIVDQILAFAPELKQTSSQLGPLIVEDVVWDDVAVHLGQPLLASLASDLAPVLECGFQR HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DGRGPAQSWLLDIFTHAFGEGGQTDTILGFAPEYNRLSANSGELPMPRINAIQQRQRRYG CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH QFLHQALDAEREARECVLDPHAFWQLAADFGQHNHYGSTSIQFQVAASSQTALEQGDYLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCEEE VLNYTLPGFGRFLTRYLSLLPAPSWQTYVQSAWQPLHNDAQAVPAEIVSVLEHNAQVHVP EEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE FTANVIVPPDEPSYRSQAIQHGVGDLSLAHDPVADQLRVYHRHADGSQQELLPLYMGFLH EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH MVSLPILQRVLAQLSPSSYHMEQLRPREQTLVSRKQPTNAISHTPRLRIGRLVLQRESWN HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCC VPTAAIPSSVANDEFMSFFNWYSWAEQAGLPSEVFVRIQRPLSSKHLNMWTNHKPLALDF CCCHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECH ENYFSIQMLRHVIADDQVSLTLEEMLPSPQQQWFDLDQQPYVIEFQVEFNRGGSI HHHHHHHHHHHHHCCCHHEEEHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCCCC >Mature Secondary Structure TDVYQSSIVIAADQPVQPTWQPASPVLVRLAGTSYNHLHNLKFERTIGLFQVILRQQRW CCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHH LDNHTQAIVDVLYTLIGTTQGSLKSSLVALKRDIFNRRLPLRSDVASLRNLEHPSLRGQV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH LRFRRTLQQLQRAWREARLVFEQELQAKRRLLQQSYAQPAFQKAVQVASSTLASSLPRYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHC NADPSQLRSRERKTEVGAYQYLMRMAGKTSPFSHFGPLVLGSADPTLAQPIVIEGQMPQA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCEEEECCCCHH RAVSQLRRSVVGAIRNALVRIPAIKAYLPLRLNPSSFVDGESLVFSRLRQQLDDPNQYFA HHHHHHHHHHHHHHHHHHHHCCHHHHEECEEECCCCCCCHHHHHHHHHHHHCCCHHHHHH SWQRRGKRSLLLDSVLAVFANQQQLSYAELLELLQTQHPELSSAKLAQTINQLLTSGLLF HHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEE YNLDLPSDYRDPVLVLIEQLADVPSAEAGQIRELLQRLAESAQAYAQATVAQRWQLEQSM EECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQIVDQILAFAPELKQTSSQLGPLIVEDVVWDDVAVHLGQPLLASLASDLAPVLECGFQR HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DGRGPAQSWLLDIFTHAFGEGGQTDTILGFAPEYNRLSANSGELPMPRINAIQQRQRRYG CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH QFLHQALDAEREARECVLDPHAFWQLAADFGQHNHYGSTSIQFQVAASSQTALEQGDYLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCEEE VLNYTLPGFGRFLTRYLSLLPAPSWQTYVQSAWQPLHNDAQAVPAEIVSVLEHNAQVHVP EEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE FTANVIVPPDEPSYRSQAIQHGVGDLSLAHDPVADQLRVYHRHADGSQQELLPLYMGFLH EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH MVSLPILQRVLAQLSPSSYHMEQLRPREQTLVSRKQPTNAISHTPRLRIGRLVLQRESWN HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCC VPTAAIPSSVANDEFMSFFNWYSWAEQAGLPSEVFVRIQRPLSSKHLNMWTNHKPLALDF CCCHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECH ENYFSIQMLRHVIADDQVSLTLEEMLPSPQQQWFDLDQQPYVIEFQVEFNRGGSI HHHHHHHHHHHHHCCCHHEEEHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA