| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897450
Identifier: 159897450
GI number: 159897450
Start: 1053248
End: 1054444
Strand: Direct
Name: 159897450
Synonym: Haur_0921
Alternate gene names: NA
Gene position: 1053248-1054444 (Clockwise)
Preceding gene: 159897449
Following gene: 159897451
Centisome position: 16.6
GC content: 50.79
Gene sequence:
>1197_bases ATGACTAACCCAGCTTTAACTCTGAATGATTTTGCTGCGCTTGAGGCCAGCACCGACTATCGCCCGCACGTTGTTGATGA TGTGCAAGTTTCGCCATTTAGCCAACAGCAAACCAACCAATATGTGGTTGGCCGCCCAGCTTCGCCATCGTTTATGCGCA CCAATGTGGTTGGCGTGCGGATTTTGGAATTGCTGAATGGTCAGCGTTCAATCGAGCAGCTACAAACCGAAATGCAACAA CGCTATGGCATTGAAGTCAGCATTGAAAAGATTCGCCATTTTTGCGATTTATGCGCTCGTCACCGTTTATTAGTCCATGA AACCTGGGCCAACACAACTCCTGATTCAGAAGATGCCCCACGTTTGGGCCGTCGCAGTGGTTTCTATTGGACGCTGATTC GCGGCGATAGTTTTATTGAACGGATTGTAGCTTGGCAGCGCTGGTGGTGGAATCCAGTCACTTGGTTGTTGATGCTTGGT TTGTTGGGTGTGGGCTTGACCTACATCGTAACCAAAGGCGTGATGTTGGTTTCGCCCTTGATGCTAGCCCACCCCGATGC CAGCAAGCACCTGATTTTCTGGCTGTTTGGGCTATTTCTGGTCGAGATTGCGACTCACGAATTGGCCCACGCTGTGGCTT GTCGCATGGCTGGAGCCAAGCCAGCTGGCTTTGGGATGGGCTTGCTCTGGTGGTTTATCCCGATTTTCTTTACCGATACC AGCGATATTTACCGCGTGCCGAGCAAATATCGGCGAGCTTCGGTGGCAGCGGCTGGCCCCTTAGTCGATGCGCTGTGGTT TGGGGTCGTTGCTAGTTTGCTTTGGCTTTTGCCGCGCGATAGTTTGGCCTATGAAATTGCTTTTGCCTATAGCGGCATCC CAGCCTTGCTCTGTTTGATCAACCTCAATCCATTTGTTTCGCGCATGGATGGCTATTGGATTATTACCAATTTACTGGAG CAGCCCAATTTGCGCCGCCGTACTGTGCGCAACATCGTCAACAACATACGCGGTTGGTTTGGCGCTGCGCCGATTATCGA CCCGCTGAGTGAGCAACAATCAGGGCGATGGCAATGGGCCTATAACATGTATGCCTTAGTTTCATTGCTCTGGACGGTTT TCTTTATGTTCAACATCGGCTTTCATTTTGCCAGCTATGGCTTCACGATTCTGCGAATGTACGCCGCAGCACTATAA
Upstream 100 bases:
>100_bases GTGATTCAAGGCCAATTAGCCCGTTGGCTCGGCTTTGATGACTATCAAACCCAGGTTTTAATCGGTTTTGCTGCTGGCTA TCCTCACAAGGAGCAAACTC
Downstream 100 bases:
>100_bases GGAGCATGGCCATGACTGATGTTTATCAATCAAGCATTGTGATCGCCGCTGATCAACCTGTCCAACCAACCTGGCAACCT GCTTCGCCCGTCTTGGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Fusion Domain; Membrane-Fusion Protein Contains Peptidase Family; Peptidase
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTNPALTLNDFAALEASTDYRPHVVDDVQVSPFSQQQTNQYVVGRPASPSFMRTNVVGVRILELLNGQRSIEQLQTEMQQ RYGIEVSIEKIRHFCDLCARHRLLVHETWANTTPDSEDAPRLGRRSGFYWTLIRGDSFIERIVAWQRWWWNPVTWLLMLG LLGVGLTYIVTKGVMLVSPLMLAHPDASKHLIFWLFGLFLVEIATHELAHAVACRMAGAKPAGFGMGLLWWFIPIFFTDT SDIYRVPSKYRRASVAAAGPLVDALWFGVVASLLWLLPRDSLAYEIAFAYSGIPALLCLINLNPFVSRMDGYWIITNLLE QPNLRRRTVRNIVNNIRGWFGAAPIIDPLSEQQSGRWQWAYNMYALVSLLWTVFFMFNIGFHFASYGFTILRMYAAAL
Sequences:
>Translated_398_residues MTNPALTLNDFAALEASTDYRPHVVDDVQVSPFSQQQTNQYVVGRPASPSFMRTNVVGVRILELLNGQRSIEQLQTEMQQ RYGIEVSIEKIRHFCDLCARHRLLVHETWANTTPDSEDAPRLGRRSGFYWTLIRGDSFIERIVAWQRWWWNPVTWLLMLG LLGVGLTYIVTKGVMLVSPLMLAHPDASKHLIFWLFGLFLVEIATHELAHAVACRMAGAKPAGFGMGLLWWFIPIFFTDT SDIYRVPSKYRRASVAAAGPLVDALWFGVVASLLWLLPRDSLAYEIAFAYSGIPALLCLINLNPFVSRMDGYWIITNLLE QPNLRRRTVRNIVNNIRGWFGAAPIIDPLSEQQSGRWQWAYNMYALVSLLWTVFFMFNIGFHFASYGFTILRMYAAAL >Mature_397_residues TNPALTLNDFAALEASTDYRPHVVDDVQVSPFSQQQTNQYVVGRPASPSFMRTNVVGVRILELLNGQRSIEQLQTEMQQR YGIEVSIEKIRHFCDLCARHRLLVHETWANTTPDSEDAPRLGRRSGFYWTLIRGDSFIERIVAWQRWWWNPVTWLLMLGL LGVGLTYIVTKGVMLVSPLMLAHPDASKHLIFWLFGLFLVEIATHELAHAVACRMAGAKPAGFGMGLLWWFIPIFFTDTS DIYRVPSKYRRASVAAAGPLVDALWFGVVASLLWLLPRDSLAYEIAFAYSGIPALLCLINLNPFVSRMDGYWIITNLLEQ PNLRRRTVRNIVNNIRGWFGAAPIIDPLSEQQSGRWQWAYNMYALVSLLWTVFFMFNIGFHFASYGFTILRMYAAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45458; Mature: 45327
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPALTLNDFAALEASTDYRPHVVDDVQVSPFSQQQTNQYVVGRPASPSFMRTNVVGVR CCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHH ILELLNGQRSIEQLQTEMQQRYGIEVSIEKIRHFCDLCARHRLLVHETWANTTPDSEDAP HHHHHCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC RLGRRSGFYWTLIRGDSFIERIVAWQRWWWNPVTWLLMLGLLGVGLTYIVTKGVMLVSPL HHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MLAHPDASKHLIFWLFGLFLVEIATHELAHAVACRMAGAKPAGFGMGLLWWFIPIFFTDT HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC SDIYRVPSKYRRASVAAAGPLVDALWFGVVASLLWLLPRDSLAYEIAFAYSGIPALLCLI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCHHHHHHHH NLNPFVSRMDGYWIITNLLEQPNLRRRTVRNIVNNIRGWFGAAPIIDPLSEQQSGRWQWA CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH YNMYALVSLLWTVFFMFNIGFHFASYGFTILRMYAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TNPALTLNDFAALEASTDYRPHVVDDVQVSPFSQQQTNQYVVGRPASPSFMRTNVVGVR CCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHH ILELLNGQRSIEQLQTEMQQRYGIEVSIEKIRHFCDLCARHRLLVHETWANTTPDSEDAP HHHHHCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC RLGRRSGFYWTLIRGDSFIERIVAWQRWWWNPVTWLLMLGLLGVGLTYIVTKGVMLVSPL HHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MLAHPDASKHLIFWLFGLFLVEIATHELAHAVACRMAGAKPAGFGMGLLWWFIPIFFTDT HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC SDIYRVPSKYRRASVAAAGPLVDALWFGVVASLLWLLPRDSLAYEIAFAYSGIPALLCLI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHCCHHHHHHHH NLNPFVSRMDGYWIITNLLEQPNLRRRTVRNIVNNIRGWFGAAPIIDPLSEQQSGRWQWA CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH YNMYALVSLLWTVFFMFNIGFHFASYGFTILRMYAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA