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The map label for this gene is yibD [C]

Identifier: 159897349

GI number: 159897349

Start: 928119

End: 929045

Strand: Reverse

Name: yibD [C]

Synonym: Haur_0820

Alternate gene names: 159897349

Gene position: 929045-928119 (Counterclockwise)

Preceding gene: 159897350

Following gene: 159897348

Centisome position: 14.64

GC content: 52.0

Gene sequence:

>927_bases
ATGATTCCAGGCCAAATTTCGATTATCATCGTGAGCTATAACAGCGCCGCCCTATTGCCCGCTTGTTTTGCCAGCCTCGC
CATGACCAACGACGACAATTATCAATTAATTGTGGTTGATAATGCTTCGAGCGATGGGTCTGCCGAGTTGGTGCGTCAGC
AGTATCCGCATGTTCAGCTGATTGCCAATCAGCATAATCAAGGCTTTGGTGCGGCCTGTAATCAAGGTATGGCGGCAGCG
ACTGGCGAGTATTTTTTATTGTTCAATCCCGATGTACAAATAACGCCCAATTGGCTAACTCTTTTGCGCCAACATCTAGC
AACCAATCCCCAAGCAGCGATTATCTGCCCAACCACCTTGTATCCCAATCAAGCGCTGCCAACCCGTCAAGGTGTGGCGA
TCACGGCGGCTGTGCCAGGCTGTGCAATGCTTTTGCGGCGTAGTGCATGGCAAGCGATTGGCGGTTTCGATCCAGCTATT
TTCTTGTATTGGGAAGATACTGAATTGTGCTGGCGAGCGTGGTTGTTAGGTTGGCAGGTGCTCGAAGATTTCGAGGCGCT
GGTGGTACACGAGCGTGGCGGTAGCGGCGGCGGCCAGCGCTGGCTGGTCGAAAGCAGCAAAAATGGCTTGTATTGCTACC
TAAAGTTACGGCCATGGTCGGCGGTTTTGGGCTATAGCCTGCGCATGCTGGCCAAAACGGCGATTGTAAGTTTGCGCCAG
CGCAATCTGGCAATGCTGAATATTTGGCTCTGGCATGGCCGCAATCTCAAGCAAACCCTCGCCACGCGCCGTGCAATTCA
AGCCCAAATCACCGCTGATCGCAGCGAAGTTGAAGGGTTGATCAAGCAGCATTTGGCGCGTGGCAAGCAGGAACGGAGAG
CAAGTCAAAAGTCAAAAGTCAAAAGTCAAAAAGCTGAGACTGAATAG

Upstream 100 bases:

>100_bases
CTTTGCGCCAAAATGCGCTCCAAACAGTTCAAGCGCTTGATTGGGGCCAGATTGCCAACCAAACAGCGGCAGTCTATCGC
CGTTTATTTGAGAAACCCGC

Downstream 100 bases:

>100_bases
AGCATCGGTATTTAACACAGAGACGCAGAGGATTCAGGGGTCAGGATTCAGGGGTCAGGATTCAGGGGATGGAAATTGAA
GCATAATCATATAAATCTGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; B-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyltransferase/Rhamnosyltransferase; Glycosyltransferase Domain-Containing Protein; DTDP-Rhamnosyltransferase; Bifunctional SAM-Dependent Methyltransferase Type; Family 2 Glycosyltransferase; Group 2 Family Glycosyltransferase; Glycosyl Transferase Group 1/2 Family Protein; FkbM Family Methyltransferase

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MIPGQISIIIVSYNSAALLPACFASLAMTNDDNYQLIVVDNASSDGSAELVRQQYPHVQLIANQHNQGFGAACNQGMAAA
TGEYFLLFNPDVQITPNWLTLLRQHLATNPQAAIICPTTLYPNQALPTRQGVAITAAVPGCAMLLRRSAWQAIGGFDPAI
FLYWEDTELCWRAWLLGWQVLEDFEALVVHERGGSGGGQRWLVESSKNGLYCYLKLRPWSAVLGYSLRMLAKTAIVSLRQ
RNLAMLNIWLWHGRNLKQTLATRRAIQAQITADRSEVEGLIKQHLARGKQERRASQKSKVKSQKAETE

Sequences:

>Translated_308_residues
MIPGQISIIIVSYNSAALLPACFASLAMTNDDNYQLIVVDNASSDGSAELVRQQYPHVQLIANQHNQGFGAACNQGMAAA
TGEYFLLFNPDVQITPNWLTLLRQHLATNPQAAIICPTTLYPNQALPTRQGVAITAAVPGCAMLLRRSAWQAIGGFDPAI
FLYWEDTELCWRAWLLGWQVLEDFEALVVHERGGSGGGQRWLVESSKNGLYCYLKLRPWSAVLGYSLRMLAKTAIVSLRQ
RNLAMLNIWLWHGRNLKQTLATRRAIQAQITADRSEVEGLIKQHLARGKQERRASQKSKVKSQKAETE
>Mature_308_residues
MIPGQISIIIVSYNSAALLPACFASLAMTNDDNYQLIVVDNASSDGSAELVRQQYPHVQLIANQHNQGFGAACNQGMAAA
TGEYFLLFNPDVQITPNWLTLLRQHLATNPQAAIICPTTLYPNQALPTRQGVAITAAVPGCAMLLRRSAWQAIGGFDPAI
FLYWEDTELCWRAWLLGWQVLEDFEALVVHERGGSGGGQRWLVESSKNGLYCYLKLRPWSAVLGYSLRMLAKTAIVSLRQ
RNLAMLNIWLWHGRNLKQTLATRRAIQAQITADRSEVEGLIKQHLARGKQERRASQKSKVKSQKAETE

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34246; Mature: 34246

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGQISIIIVSYNSAALLPACFASLAMTNDDNYQLIVVDNASSDGSAELVRQQYPHVQL
CCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEE
IANQHNQGFGAACNQGMAAATGEYFLLFNPDVQITPNWLTLLRQHLATNPQAAIICPTTL
EECCCCCCCCHHHCCCCEECCCCEEEEECCCCEECCHHHHHHHHHHCCCCCEEEEECCCC
YPNQALPTRQGVAITAAVPGCAMLLRRSAWQAIGGFDPAIFLYWEDTELCWRAWLLGWQV
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH
LEDFEALVVHERGGSGGGQRWLVESSKNGLYCYLKLRPWSAVLGYSLRMLAKTAIVSLRQ
HHHHHEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RNLAMLNIWLWHGRNLKQTLATRRAIQAQITADRSEVEGLIKQHLARGKQERRASQKSKV
CCEEEEEEEEECCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSQKAETE
HHHCCCCC
>Mature Secondary Structure
MIPGQISIIIVSYNSAALLPACFASLAMTNDDNYQLIVVDNASSDGSAELVRQQYPHVQL
CCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEE
IANQHNQGFGAACNQGMAAATGEYFLLFNPDVQITPNWLTLLRQHLATNPQAAIICPTTL
EECCCCCCCCHHHCCCCEECCCCEEEEECCCCEECCHHHHHHHHHHCCCCCEEEEECCCC
YPNQALPTRQGVAITAAVPGCAMLLRRSAWQAIGGFDPAIFLYWEDTELCWRAWLLGWQV
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH
LEDFEALVVHERGGSGGGQRWLVESSKNGLYCYLKLRPWSAVLGYSLRMLAKTAIVSLRQ
HHHHHEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RNLAMLNIWLWHGRNLKQTLATRRAIQAQITADRSEVEGLIKQHLARGKQERRASQKSKV
CCEEEEEEEEECCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHHHHH
KSQKAETE
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA