| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897345
Identifier: 159897345
GI number: 159897345
Start: 924392
End: 924958
Strand: Reverse
Name: 159897345
Synonym: Haur_0816
Alternate gene names: NA
Gene position: 924958-924392 (Counterclockwise)
Preceding gene: 159897347
Following gene: 159897344
Centisome position: 14.57
GC content: 44.97
Gene sequence:
>567_bases ATGAGCATTATGATTTTACTTGTGCTAGGTTTATGTGTTTTGGGTTTCTATATTCATGTGGGCATCATTTTTAATCGGGT GGTGCAATTAGCTCAACAGCGCTCAGATTTGCGCACTTCAGCTTGGCTACTGCTGGTTAATTTAGCCGAACCCTTTATCA TGGGGGTTTGGCTGCTGATTCAATTAATATACTTCGATTTCGAGTCGCTGATTGGTTCAGTTGGCGAGCCTTTGGCAGCA ACCTCAAGCTTTTTTACCTACTACTGGCCAATGGCCCTGTTGCTGATTGGAATTCCAGTAATCGCCTTATTATTTATCCC TCAAGCGCAAGTGCGGGCAACTGCTATCCGCAGCCTCTGGACGGGAGCAATGCGCTTAGTCATGGTCTGGTTGTGCTTCA ATTTCATTATGGTTGGAGCGACGATTTTGATTGCGATTGGCTTAAGCATCTGGTCGTTGCGGCTGATTAATAGCTATTAC AAATCATTAATGGCCCAATCGTCACTTGCCGTTGTGTTCGATCAGCATGGCCTTGCGATTCAAGCGATTGTTCCATCGAT TGAGTAA
Upstream 100 bases:
>100_bases TAGACCATAAGAGGTATTGATTTAACATAACCTAGCCTGCTAAGATGATTAAACTAAATTGAGCAAGATTAGAGTTGCCA ATCATCACAAGGAGTAGGCG
Downstream 100 bases:
>100_bases ACCCCACGTTCTCTCTAGGTTTGTTTGCAGGGATTTTTGGGCTAAATCGCTATACTGGCCTGCTTTTGAACAACCTATTT GAGCATTAATGTACGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAA TSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYY KSLMAQSSLAVVFDQHGLAIQAIVPSIE
Sequences:
>Translated_188_residues MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAA TSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYY KSLMAQSSLAVVFDQHGLAIQAIVPSIE >Mature_187_residues SIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAAT SSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYK SLMAQSSLAVVFDQHGLAIQAIVPSIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20985; Mature: 20853
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLIYFDFESLIGSVGEPLAATSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYKSLMAQSSLAVVFDQHGLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH QAIVPSIE HHHCCCCC >Mature Secondary Structure SIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLIYFDFESLIGSVGEPLAATSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYKSLMAQSSLAVVFDQHGLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH QAIVPSIE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA