Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897308
Identifier: 159897308
GI number: 159897308
Start: 880313
End: 881257
Strand: Direct
Name: 159897308
Synonym: Haur_0779
Alternate gene names: NA
Gene position: 880313-881257 (Clockwise)
Preceding gene: 159897303
Following gene: 159897309
Centisome position: 13.87
GC content: 49.63
Gene sequence:
>945_bases ATGGCGCTTGGGCAACAACTGGTGCATCCTGATTGTTTGGCATTTGTTGCGGTGGTTGAAGAATTATTAGCGCGTCGTCA ACAAGGCCTCGTGCCGCAAAATCGCTGGCAACTCGCCGATGATCCATGGGGGCCACGCGCTTGGAATCGTACCGAGTTGG AAGATATGGTTTATAGCAGCTACAAGCAGATGCGCAAAGGCCGCATCACCCGCCCGCCACGCCGCGAGGTGGTGATGGAT ATTGCCGATTATCTGAATTGCACAATCGAGGAGCGCAATCGTTTATTGATTGCCGCCGATGGTTCGCCGATTATGCCCTA CCTGACTGGCGCGGCGCTCACGCCAATTCTTGAGATTACAATTGAAATTGTGCAACAACTGAGCATGCCGGCGTTTGTAA TCAATCGTGATTGGCAGATGCACTATTTCAACGAGCATTTGCTGAATTTGTTTGGGGTTACGCCTGAAATGTTGGCGGCG ATTGATCCTACTCAGTTGAATGTGCTAGGCCTGTTGTGTAACCCCGATTTGCCCTTATACCCGCAGTTGATTCAAAATCG CGCTTCATGGCAATTTATGGTGCGCAAAACGATTTATGGCTTTAAACAGGCCAATGTGCTATGCCAATATGAGCCATGGT ATCAACAATTGGTCGCTGAGTTGTTACAACTGCCTGAATTTGCCAGCCAATGGCCGACGGTTAGCCTCGATAAACCGCTG GTTACGCCGAATATGGGGCTTGAATCGCCAACAATTGTGCTAGAGGCATTAATTCCGCATACCAAGCCAATGCCCAAACG GGCTTGGCTGCGACCATTGTTGATGTCGGCGGGCTATTTTCAATTTGATTTTCCGCAAATTGTGGCTTTTTTGCCCGCCA ACGCCGAGAGCCAAGCGATTTATGCAGAAATTGGCGTGCCGCTGGGGATTAATCATAGTAACTAA
Upstream 100 bases:
>100_bases TCCTTGATCGTTGCCATCGTTGGCCTCATCTATTTAAACGTTTAAATAGAGTATACTGCACTTATTTATCCTTGACAAGT TGCGATTAAAAGGGGGTTGT
Downstream 100 bases:
>100_bases GTTACTCGGCCCTCACCCCCTGACCCCCTCCTTTCAAGGGTAGGTTTTTAATAAGCATGGGTGATCACCACCCTTCCGTC CCGCCTCAAGGCGGGAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MALGQQLVHPDCLAFVAVVEELLARRQQGLVPQNRWQLADDPWGPRAWNRTELEDMVYSSYKQMRKGRITRPPRREVVMD IADYLNCTIEERNRLLIAADGSPIMPYLTGAALTPILEITIEIVQQLSMPAFVINRDWQMHYFNEHLLNLFGVTPEMLAA IDPTQLNVLGLLCNPDLPLYPQLIQNRASWQFMVRKTIYGFKQANVLCQYEPWYQQLVAELLQLPEFASQWPTVSLDKPL VTPNMGLESPTIVLEALIPHTKPMPKRAWLRPLLMSAGYFQFDFPQIVAFLPANAESQAIYAEIGVPLGINHSN
Sequences:
>Translated_314_residues MALGQQLVHPDCLAFVAVVEELLARRQQGLVPQNRWQLADDPWGPRAWNRTELEDMVYSSYKQMRKGRITRPPRREVVMD IADYLNCTIEERNRLLIAADGSPIMPYLTGAALTPILEITIEIVQQLSMPAFVINRDWQMHYFNEHLLNLFGVTPEMLAA IDPTQLNVLGLLCNPDLPLYPQLIQNRASWQFMVRKTIYGFKQANVLCQYEPWYQQLVAELLQLPEFASQWPTVSLDKPL VTPNMGLESPTIVLEALIPHTKPMPKRAWLRPLLMSAGYFQFDFPQIVAFLPANAESQAIYAEIGVPLGINHSN >Mature_313_residues ALGQQLVHPDCLAFVAVVEELLARRQQGLVPQNRWQLADDPWGPRAWNRTELEDMVYSSYKQMRKGRITRPPRREVVMDI ADYLNCTIEERNRLLIAADGSPIMPYLTGAALTPILEITIEIVQQLSMPAFVINRDWQMHYFNEHLLNLFGVTPEMLAAI DPTQLNVLGLLCNPDLPLYPQLIQNRASWQFMVRKTIYGFKQANVLCQYEPWYQQLVAELLQLPEFASQWPTVSLDKPLV TPNMGLESPTIVLEALIPHTKPMPKRAWLRPLLMSAGYFQFDFPQIVAFLPANAESQAIYAEIGVPLGINHSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35864; Mature: 35733
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGQQLVHPDCLAFVAVVEELLARRQQGLVPQNRWQLADDPWGPRAWNRTELEDMVYSS CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YKQMRKGRITRPPRREVVMDIADYLNCTIEERNRLLIAADGSPIMPYLTGAALTPILEIT HHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHH IEIVQQLSMPAFVINRDWQMHYFNEHLLNLFGVTPEMLAAIDPTQLNVLGLLCNPDLPLY HHHHHHHCCCEEEECCCCEEHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCC PQLIQNRASWQFMVRKTIYGFKQANVLCQYEPWYQQLVAELLQLPEFASQWPTVSLDKPL HHHHCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCHHHHHHCCCCCCCCCC VTPNMGLESPTIVLEALIPHTKPMPKRAWLRPLLMSAGYFQFDFPQIVAFLPANAESQAI CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHCCCCCCCCEE YAEIGVPLGINHSN EEECCCEECCCCCC >Mature Secondary Structure ALGQQLVHPDCLAFVAVVEELLARRQQGLVPQNRWQLADDPWGPRAWNRTELEDMVYSS CCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YKQMRKGRITRPPRREVVMDIADYLNCTIEERNRLLIAADGSPIMPYLTGAALTPILEIT HHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHH IEIVQQLSMPAFVINRDWQMHYFNEHLLNLFGVTPEMLAAIDPTQLNVLGLLCNPDLPLY HHHHHHHCCCEEEECCCCEEHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCCC PQLIQNRASWQFMVRKTIYGFKQANVLCQYEPWYQQLVAELLQLPEFASQWPTVSLDKPL HHHHCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCHHHHHHCCCCCCCCCC VTPNMGLESPTIVLEALIPHTKPMPKRAWLRPLLMSAGYFQFDFPQIVAFLPANAESQAI CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHCCCCCCCCEE YAEIGVPLGINHSN EEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA