Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897309
Identifier: 159897309
GI number: 159897309
Start: 881793
End: 882593
Strand: Direct
Name: 159897309
Synonym: Haur_0780
Alternate gene names: NA
Gene position: 881793-882593 (Clockwise)
Preceding gene: 159897308
Following gene: 159897310
Centisome position: 13.89
GC content: 46.94
Gene sequence:
>801_bases ATGCCAACGAAAACAATTGTCTTGATTCACGGTCTGTTTGTGTCGAAGCATTCTTGGCAGCCGTGGGTTGAATATTACCA AGCGAAGGGCTATACGGTGTTAACGCCAGCTTGGCCAGGCCGCGATCAAAGTGTCGCCGAATTAAAGCAACGGTCCAATG ATCCAGCTTTAGCTCAGCATACATTAAAAGAAAGCATCGATTATCATGTGAAATTTATTCAGAGTTTGCCCGAAAAACCA ATTGTGATTGGCCACTCGATGGGTGGCTTGATTACCCAAATTTTGGCTAATCGCCAGTTGATTAGCGCTGGCGTAGCGAT CGATTCGGCTCCGCCGCAGGGCGTAATCAGCACCAAATGGTCGTTTATCAAATCGGCCTTGCCCATGCTGAATCCGTTTC GTTCGACCAGCAAGCCTTTTATGATGCCGTTTGAGCATTTTCAATATAGCTTTGTCAATGGCATGCCCTTGGCCGAGCAA CAAGCGATTTATCAAAACCAAGTTGTACCCGAATCGCTGCATAACTTGCGTCAATCGTTGACCAGCGTTAGTCGGGTAGA TTTCAAGGCTGAGCATGCCCCGCTGCTGCTGATTGCTGGCGAAATTGACCATATTATTCCGGCTTCGCTGAATTACAGCA ATTATCGCAAATATCGCAATAGCAAATCGCTGACCGATTTCAAGCAATTTGCTGGGCGCAATCACTACATTGTCGGCCAA CCAAACTGGCAAGAAGTTGCTGAATATGCCTTGAATTGGGTCGAAACTAAGGCTTTGGCCAGTCAATCGGTTGCTCAGTA A
Upstream 100 bases:
>100_bases ATACTCTCAAAGGACATTTTGTACCTTGTGGTTGGAATAGAATCCATTCAGATAACTCGCCGCGAGCAAACTCGCTTAGC AATGTTGAGGATGGATTGTC
Downstream 100 bases:
>100_bases TTGAGTAGCTGCTGCTTAACCGTGGTCTTGCCGCAACGAGGCCACGGTTTTTGGCGGCCAAATTCGGGCCGATGAATCAA CATAAGCATGATGAATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPTKTIVLIHGLFVSKHSWQPWVEYYQAKGYTVLTPAWPGRDQSVAELKQRSNDPALAQHTLKESIDYHVKFIQSLPEKP IVIGHSMGGLITQILANRQLISAGVAIDSAPPQGVISTKWSFIKSALPMLNPFRSTSKPFMMPFEHFQYSFVNGMPLAEQ QAIYQNQVVPESLHNLRQSLTSVSRVDFKAEHAPLLLIAGEIDHIIPASLNYSNYRKYRNSKSLTDFKQFAGRNHYIVGQ PNWQEVAEYALNWVETKALASQSVAQ
Sequences:
>Translated_266_residues MPTKTIVLIHGLFVSKHSWQPWVEYYQAKGYTVLTPAWPGRDQSVAELKQRSNDPALAQHTLKESIDYHVKFIQSLPEKP IVIGHSMGGLITQILANRQLISAGVAIDSAPPQGVISTKWSFIKSALPMLNPFRSTSKPFMMPFEHFQYSFVNGMPLAEQ QAIYQNQVVPESLHNLRQSLTSVSRVDFKAEHAPLLLIAGEIDHIIPASLNYSNYRKYRNSKSLTDFKQFAGRNHYIVGQ PNWQEVAEYALNWVETKALASQSVAQ >Mature_265_residues PTKTIVLIHGLFVSKHSWQPWVEYYQAKGYTVLTPAWPGRDQSVAELKQRSNDPALAQHTLKESIDYHVKFIQSLPEKPI VIGHSMGGLITQILANRQLISAGVAIDSAPPQGVISTKWSFIKSALPMLNPFRSTSKPFMMPFEHFQYSFVNGMPLAEQQ AIYQNQVVPESLHNLRQSLTSVSRVDFKAEHAPLLLIAGEIDHIIPASLNYSNYRKYRNSKSLTDFKQFAGRNHYIVGQP NWQEVAEYALNWVETKALASQSVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30033; Mature: 29901
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKTIVLIHGLFVSKHSWQPWVEYYQAKGYTVLTPAWPGRDQSVAELKQRSNDPALAQH CCCCEEEEEEEHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHH TLKESIDYHVKFIQSLPEKPIVIGHSMGGLITQILANRQLISAGVAIDSAPPQGVISTKW HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHCCEECCCCCCCCHHHHH SFIKSALPMLNPFRSTSKPFMMPFEHFQYSFVNGMPLAEQQAIYQNQVVPESLHNLRQSL HHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH TSVSRVDFKAEHAPLLLIAGEIDHIIPASLNYSNYRKYRNSKSLTDFKQFAGRNHYIVGQ HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEECC PNWQEVAEYALNWVETKALASQSVAQ CCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTKTIVLIHGLFVSKHSWQPWVEYYQAKGYTVLTPAWPGRDQSVAELKQRSNDPALAQH CCCEEEEEEEHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHH TLKESIDYHVKFIQSLPEKPIVIGHSMGGLITQILANRQLISAGVAIDSAPPQGVISTKW HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHCCEECCCCCCCCHHHHH SFIKSALPMLNPFRSTSKPFMMPFEHFQYSFVNGMPLAEQQAIYQNQVVPESLHNLRQSL HHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHH TSVSRVDFKAEHAPLLLIAGEIDHIIPASLNYSNYRKYRNSKSLTDFKQFAGRNHYIVGQ HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEECC PNWQEVAEYALNWVETKALASQSVAQ CCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA