Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897234
Identifier: 159897234
GI number: 159897234
Start: 812398
End: 812799
Strand: Direct
Name: 159897234
Synonym: Haur_0705
Alternate gene names: NA
Gene position: 812398-812799 (Clockwise)
Preceding gene: 159897233
Following gene: 159897235
Centisome position: 12.8
GC content: 53.98
Gene sequence:
>402_bases ATGGCGTTTTGGTTGCTCAAAACTGAGCCAAATGAGTTTAGTTGGGAGGATTTGCTGCGCGATGGTTCGACGGTTTGGAA TGGCGTAACCAACGCCCAAGCCTTGATTAATCTGCGTGCCATGCAGCTTGATGACCAATGTTTGATCTATCACAGTGGCG ATGTACGGGCTGCTGTGGGCATTGCGCGGGTTAGTCGCACCGCCTACCCCGACCCCAACAGCGAAAACCCCAAGCATGTA GTGGTCGAGATTGAGCCAGTTGGCCCGCTTGCTCAGCCAGTAAGTTTAGCCCAAATCAAAGCCGAACCCAGCTTGGCCGA TTGGGCCTTGGTGCGTCAATCGCGGCTTTCGGTTGTGCCATGCAACCCTGAACAATGGGCTTGGATTATCGCCCAAGCTT GA
Upstream 100 bases:
>100_bases TGGAACAAAGTTGCTGAAAACGATAAGTAAGCCTGATTAACCACAGGTTTGAGCACGGGTGGTTGTTGCCATCCGTGCTT TTGAGTTAAGGAGGATACAA
Downstream 100 bases:
>100_bases TCCTAAAATGCCGTTGCCAGGTTGGGAACAATCTAGCTAGCTAGCACGTTAGGCTAGTGCAATTGCAAACAACGAGAACG TTCTCCCGTGGAAATCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAFWLLKTEPNEFSWEDLLRDGSTVWNGVTNAQALINLRAMQLDDQCLIYHSGDVRAAVGIARVSRTAYPDPNSENPKHV VVEIEPVGPLAQPVSLAQIKAEPSLADWALVRQSRLSVVPCNPEQWAWIIAQA
Sequences:
>Translated_133_residues MAFWLLKTEPNEFSWEDLLRDGSTVWNGVTNAQALINLRAMQLDDQCLIYHSGDVRAAVGIARVSRTAYPDPNSENPKHV VVEIEPVGPLAQPVSLAQIKAEPSLADWALVRQSRLSVVPCNPEQWAWIIAQA >Mature_132_residues AFWLLKTEPNEFSWEDLLRDGSTVWNGVTNAQALINLRAMQLDDQCLIYHSGDVRAAVGIARVSRTAYPDPNSENPKHVV VEIEPVGPLAQPVSLAQIKAEPSLADWALVRQSRLSVVPCNPEQWAWIIAQA
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14773; Mature: 14642
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFWLLKTEPNEFSWEDLLRDGSTVWNGVTNAQALINLRAMQLDDQCLIYHSGDVRAAVG CEEEEEEECCCCCCHHHHHCCCCCEECCCCCCEEEEEEEEEEECCEEEEEECCCCEEHHH IARVSRTAYPDPNSENPKHVVVEIEPVGPLAQPVSLAQIKAEPSLADWALVRQSRLSVVP HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEE CNPEQWAWIIAQA CCCCCEEEEEEEC >Mature Secondary Structure AFWLLKTEPNEFSWEDLLRDGSTVWNGVTNAQALINLRAMQLDDQCLIYHSGDVRAAVG EEEEEEECCCCCCHHHHHCCCCCEECCCCCCEEEEEEEEEEECCEEEEEECCCCEEHHH IARVSRTAYPDPNSENPKHVVVEIEPVGPLAQPVSLAQIKAEPSLADWALVRQSRLSVVP HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEE CNPEQWAWIIAQA CCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA