Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897182
Identifier: 159897182
GI number: 159897182
Start: 750561
End: 751088
Strand: Direct
Name: 159897182
Synonym: Haur_0653
Alternate gene names: NA
Gene position: 750561-751088 (Clockwise)
Preceding gene: 159897181
Following gene: 159897183
Centisome position: 11.83
GC content: 59.28
Gene sequence:
>528_bases ATGGGACGCAAAAGCACGATTACCGATGAGCTTGCCAACCAGCTGCTCGCCGCTGCCAAAGCGGGATCGAGCCAACGCCA GATCGCGCGGGACTTCGGCTTGTCGGTCAGCACCGTGCAGCGCTTTTTCGAATCACTGCCGACGGCGACCGCGCCGACGC TCATGCAACATGCGGCGGTCGTCGAACGGGCTGGCTCGTCCCTCTGGGATAGTCGTGCGGCGCTCAGTGACAACTACCAA CGGGTGCTCGATCTGGTGAACAAGCTCGAAACGGGCATTGTCGAAGTTGATGGTGAGTACACCAGTCGCACGCCGATTGC CGTGCATGTGGCGGCGCTGCGCGAAGTGCGCGAACACATCAAAACCAGTTTGGCCATTCTCAAGTTGTTGGTTGATGTCG ATGAAGTGCGCCGCTTCCAACAAGCGGTGCTGACAGCGATTGGAGAGGCCGATGAATCGACCAAGCAACGGATTCTCGCC ACCCTCCAAGCGCGACACGCTCTGGAGTTCCCTGTTTTCCGATCTTAG
Upstream 100 bases:
>100_bases GTGCGGTTGGTCGCCTTGTTGCCAGCACCACCCATTTCGAATCACTAATCCATTCATACCGAATCATTTCGAATCATTGT CGCATCACCCTGAGGCTGCC
Downstream 100 bases:
>100_bases CCTTGCCGTTGGCGGGAAACGCACGGTGTTGCCCTATGCCCATGATCCGGTGGCCTATGCGCGGGAGGTGTTAGGGGAAG TTTGGTGGACGAAGCAGGAA
Product: resolvase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGRKSTITDELANQLLAAAKAGSSQRQIARDFGLSVSTVQRFFESLPTATAPTLMQHAAVVERAGSSLWDSRAALSDNYQ RVLDLVNKLETGIVEVDGEYTSRTPIAVHVAALREVREHIKTSLAILKLLVDVDEVRRFQQAVLTAIGEADESTKQRILA TLQARHALEFPVFRS
Sequences:
>Translated_175_residues MGRKSTITDELANQLLAAAKAGSSQRQIARDFGLSVSTVQRFFESLPTATAPTLMQHAAVVERAGSSLWDSRAALSDNYQ RVLDLVNKLETGIVEVDGEYTSRTPIAVHVAALREVREHIKTSLAILKLLVDVDEVRRFQQAVLTAIGEADESTKQRILA TLQARHALEFPVFRS >Mature_174_residues GRKSTITDELANQLLAAAKAGSSQRQIARDFGLSVSTVQRFFESLPTATAPTLMQHAAVVERAGSSLWDSRAALSDNYQR VLDLVNKLETGIVEVDGEYTSRTPIAVHVAALREVREHIKTSLAILKLLVDVDEVRRFQQAVLTAIGEADESTKQRILAT LQARHALEFPVFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19256; Mature: 19125
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKSTITDELANQLLAAAKAGSSQRQIARDFGLSVSTVQRFFESLPTATAPTLMQHAAV CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH VERAGSSLWDSRAALSDNYQRVLDLVNKLETGIVEVDGEYTSRTPIAVHVAALREVREHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHH KTSLAILKLLVDVDEVRRFQQAVLTAIGEADESTKQRILATLQARHALEFPVFRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GRKSTITDELANQLLAAAKAGSSQRQIARDFGLSVSTVQRFFESLPTATAPTLMQHAAV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH VERAGSSLWDSRAALSDNYQRVLDLVNKLETGIVEVDGEYTSRTPIAVHVAALREVREHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHH KTSLAILKLLVDVDEVRRFQQAVLTAIGEADESTKQRILATLQARHALEFPVFRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA