Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897183
Identifier: 159897183
GI number: 159897183
Start: 751114
End: 752532
Strand: Direct
Name: 159897183
Synonym: Haur_0654
Alternate gene names: NA
Gene position: 751114-752532 (Clockwise)
Preceding gene: 159897182
Following gene: 159897184
Centisome position: 11.83
GC content: 59.76
Gene sequence:
>1419_bases GTGTTGCCCTATGCCCATGATCCGGTGGCCTATGCGCGGGAGGTGTTAGGGGAAGTTTGGTGGACGAAGCAGGAACTGAT CGCGCGGTCGTTGCTCACGCCGCCGTATCGCACGTTGGTCAAAGCGTGTCATAAGGTTGGCAAAACCCACCTTGGCGGCG GCTTAGTCAACTGGTGGTACGACAGTTTTGACCCGGGACTGGTGCTGACAACCGCCCCCACCGATCGCCAAGTGCGTGAC CTGCTTTGGAAGGAAGTGCGCATGCAGCGGCGCGGACGCGCGGGCTTTACTGGCCCTAAGTCGCCGCGCTTGGAGAGTAC GCCCGACCATTTCGCCCATGGCTTCACGGCCAAAGATGGTGATTCGTTTCAAGGCCATCACTCGCCGCATACCCTGTTCA TCTTTGATGAAGCGGTTGGCGTGGCCAGTGTGTTTTGGGAAACCGCAGAGTCGATGTTCAACGAGGGCGGCGCATGGCTG GCGATTTTCAATCCGACCGATACCAGCTCGCAAGCCTATGCTGAGGAATTGAGTGGGGGTTGGCATGTCATTTCGATGAG CGTGCTCGAGCATCCTAACATTCTGGCCGAATTGCAGGGCTTGCCGCCGCCGTTTCCCTCGGCGATTCGCCTGAGCCGCG TCGATACCTTGCTCAAAAAGTGGTGTCGCGCACTCAGCCCCGAAGAACCAAAACGCGCCACCGATATTCACTGGCGGGAT GCCTGGTATCGGCCTGGACCGATCGCCGAAGCGCGGTTGTTGGGCCGTTGGCCATCCCAAGCGACCAACAATGTTTGGAG CGATGGCGCGTTTCAGGTGGCAGAAAGCCTGCTGTTGCCTGCGAGTGATGAACCGTGCGAGCTGGGCTGTGATGTCGCCC GCTATGGCGATGACTTTACCGAGATTCATGTGCGCCGTGGCGGCCACAGTCTCTATCACGAAGCGGCCAATGGCTGGAGC ACGGTCGAAACCGCAGGGCGCTTGAAGCAATTGGCCAACGAATATGGGCGACGATGTGGGGTTGATGGTCGCGCCGTTGC GGTCAAAATCGACGATGACGGCATCGGCGGCGGCGTGGTCGATCTCGCCGACGGCTATACCTTCCTCGGAGTCAGTGGGG CACGCACGGCCTACGATCCCGAGAAGTATCCCAATCGCCGTAGCGAATTATGGTTCAGTGTGGCCGAACGGGCGATGGAG CAACGTCTGAGCTTCGTTGCGCTCGATGCGGAAACCCGCCGCGAGCTGCGTCGCCAAGCGATGGCTCCCACGTGGAAGCA AGATAGTCAGGGACGGCGGGTCGTCGAGCCAAAAGCCGACACCAAGAAACGGATTAAGCGCAGTCCCGATGGCATGGATG CGGTCAATTTGGCCTATGCCCCCGCCCCGATCGTCAGTTTTGGCCCAAGTCTTTGGTAA
Upstream 100 bases:
>100_bases GAATCGACCAAGCAACGGATTCTCGCCACCCTCCAAGCGCGACACGCTCTGGAGTTCCCTGTTTTCCGATCTTAGCCTTG CCGTTGGCGGGAAACGCACG
Downstream 100 bases:
>100_bases GAAAGCAGCAGGAATGGGTATGTTTCCACCAACCGCCACCAGTAGCATCATTAGTCAGCACCTGCATGGGCAACGCGTGG CTGATGATTTTCAGCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MLPYAHDPVAYAREVLGEVWWTKQELIARSLLTPPYRTLVKACHKVGKTHLGGGLVNWWYDSFDPGLVLTTAPTDRQVRD LLWKEVRMQRRGRAGFTGPKSPRLESTPDHFAHGFTAKDGDSFQGHHSPHTLFIFDEAVGVASVFWETAESMFNEGGAWL AIFNPTDTSSQAYAEELSGGWHVISMSVLEHPNILAELQGLPPPFPSAIRLSRVDTLLKKWCRALSPEEPKRATDIHWRD AWYRPGPIAEARLLGRWPSQATNNVWSDGAFQVAESLLLPASDEPCELGCDVARYGDDFTEIHVRRGGHSLYHEAANGWS TVETAGRLKQLANEYGRRCGVDGRAVAVKIDDDGIGGGVVDLADGYTFLGVSGARTAYDPEKYPNRRSELWFSVAERAME QRLSFVALDAETRRELRRQAMAPTWKQDSQGRRVVEPKADTKKRIKRSPDGMDAVNLAYAPAPIVSFGPSLW
Sequences:
>Translated_472_residues MLPYAHDPVAYAREVLGEVWWTKQELIARSLLTPPYRTLVKACHKVGKTHLGGGLVNWWYDSFDPGLVLTTAPTDRQVRD LLWKEVRMQRRGRAGFTGPKSPRLESTPDHFAHGFTAKDGDSFQGHHSPHTLFIFDEAVGVASVFWETAESMFNEGGAWL AIFNPTDTSSQAYAEELSGGWHVISMSVLEHPNILAELQGLPPPFPSAIRLSRVDTLLKKWCRALSPEEPKRATDIHWRD AWYRPGPIAEARLLGRWPSQATNNVWSDGAFQVAESLLLPASDEPCELGCDVARYGDDFTEIHVRRGGHSLYHEAANGWS TVETAGRLKQLANEYGRRCGVDGRAVAVKIDDDGIGGGVVDLADGYTFLGVSGARTAYDPEKYPNRRSELWFSVAERAME QRLSFVALDAETRRELRRQAMAPTWKQDSQGRRVVEPKADTKKRIKRSPDGMDAVNLAYAPAPIVSFGPSLW >Mature_472_residues MLPYAHDPVAYAREVLGEVWWTKQELIARSLLTPPYRTLVKACHKVGKTHLGGGLVNWWYDSFDPGLVLTTAPTDRQVRD LLWKEVRMQRRGRAGFTGPKSPRLESTPDHFAHGFTAKDGDSFQGHHSPHTLFIFDEAVGVASVFWETAESMFNEGGAWL AIFNPTDTSSQAYAEELSGGWHVISMSVLEHPNILAELQGLPPPFPSAIRLSRVDTLLKKWCRALSPEEPKRATDIHWRD AWYRPGPIAEARLLGRWPSQATNNVWSDGAFQVAESLLLPASDEPCELGCDVARYGDDFTEIHVRRGGHSLYHEAANGWS TVETAGRLKQLANEYGRRCGVDGRAVAVKIDDDGIGGGVVDLADGYTFLGVSGARTAYDPEKYPNRRSELWFSVAERAME QRLSFVALDAETRRELRRQAMAPTWKQDSQGRRVVEPKADTKKRIKRSPDGMDAVNLAYAPAPIVSFGPSLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52664; Mature: 52664
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPYAHDPVAYAREVLGEVWWTKQELIARSLLTPPYRTLVKACHKVGKTHLGGGLVNWWY CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCHHHHHH DSFDPGLVLTTAPTDRQVRDLLWKEVRMQRRGRAGFTGPKSPRLESTPDHFAHGFTAKDG CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC DSFQGHHSPHTLFIFDEAVGVASVFWETAESMFNEGGAWLAIFNPTDTSSQAYAEELSGG CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCC WHVISMSVLEHPNILAELQGLPPPFPSAIRLSRVDTLLKKWCRALSPEEPKRATDIHWRD EEEEEEHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AWYRPGPIAEARLLGRWPSQATNNVWSDGAFQVAESLLLPASDEPCELGCDVARYGDDFT CCCCCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCE EIHVRRGGHSLYHEAANGWSTVETAGRLKQLANEYGRRCGVDGRAVAVKIDDDGIGGGVV EEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEE DLADGYTFLGVSGARTAYDPEKYPNRRSELWFSVAERAMEQRLSFVALDAETRRELRRQA ECCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH MAPTWKQDSQGRRVVEPKADTKKRIKRSPDGMDAVNLAYAPAPIVSFGPSLW CCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCEEHEEECCCCHHHCCCCCC >Mature Secondary Structure MLPYAHDPVAYAREVLGEVWWTKQELIARSLLTPPYRTLVKACHKVGKTHLGGGLVNWWY CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCHHHHHH DSFDPGLVLTTAPTDRQVRDLLWKEVRMQRRGRAGFTGPKSPRLESTPDHFAHGFTAKDG CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC DSFQGHHSPHTLFIFDEAVGVASVFWETAESMFNEGGAWLAIFNPTDTSSQAYAEELSGG CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCC WHVISMSVLEHPNILAELQGLPPPFPSAIRLSRVDTLLKKWCRALSPEEPKRATDIHWRD EEEEEEHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AWYRPGPIAEARLLGRWPSQATNNVWSDGAFQVAESLLLPASDEPCELGCDVARYGDDFT CCCCCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCE EIHVRRGGHSLYHEAANGWSTVETAGRLKQLANEYGRRCGVDGRAVAVKIDDDGIGGGVV EEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEE DLADGYTFLGVSGARTAYDPEKYPNRRSELWFSVAERAMEQRLSFVALDAETRRELRRQA ECCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH MAPTWKQDSQGRRVVEPKADTKKRIKRSPDGMDAVNLAYAPAPIVSFGPSLW CCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCEEHEEECCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA