Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897172
Identifier: 159897172
GI number: 159897172
Start: 741547
End: 741906
Strand: Direct
Name: 159897172
Synonym: Haur_0643
Alternate gene names: NA
Gene position: 741547-741906 (Clockwise)
Preceding gene: 159897171
Following gene: 159897174
Centisome position: 11.68
GC content: 57.78
Gene sequence:
>360_bases ATGGCTGATACGACACCATCACCATCGAGCATCAAAGTGGAGCACCAGATTCACTTCACGCTTGATGGCTTTCCCTGCAC CACCTCGGTAGCAGGTGCGACCGCCGATCAACTCAAGGTGGTGATTGATCGCCTGAAAGCGATCGGCGCACAACCACCCA CGACACACCCAGCTCACCCAACCCAACCAGTCGCCGCCGTTGCACCACCCAGCGTTCCCGCTCAACGCCTCTGCCCAACG CATGGAACACCCTTACAACTGCGCCAAGGCACGCGACGCGGTGGCAAGCCCTACAAATTTTGGAGCTGCAACCATACCGA TGCGGATGGCAACTGGTGTGATCATACCGAGAAGCCATAA
Upstream 100 bases:
>100_bases CTCGCGTTTGGTGGTACATCGTACCGATATTCCGGCGGTGCTGGAATCCTTGACCCGTTGGGCTGCTTCATCCTATTAAT AGATATAGAGGATTATCGTT
Downstream 100 bases:
>100_bases GGGAACTCCATGTACCTTCATCCAAAAACCATCACTTCAGTACAGCTAGGTCTCAATGCGCAGTCCCTGAACTCTGGCAG CGATCATCTGTACTAGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MADTTPSPSSIKVEHQIHFTLDGFPCTTSVAGATADQLKVVIDRLKAIGAQPPTTHPAHPTQPVAAVAPPSVPAQRLCPT HGTPLQLRQGTRRGGKPYKFWSCNHTDADGNWCDHTEKP
Sequences:
>Translated_119_residues MADTTPSPSSIKVEHQIHFTLDGFPCTTSVAGATADQLKVVIDRLKAIGAQPPTTHPAHPTQPVAAVAPPSVPAQRLCPT HGTPLQLRQGTRRGGKPYKFWSCNHTDADGNWCDHTEKP >Mature_118_residues ADTTPSPSSIKVEHQIHFTLDGFPCTTSVAGATADQLKVVIDRLKAIGAQPPTTHPAHPTQPVAAVAPPSVPAQRLCPTH GTPLQLRQGTRRGGKPYKFWSCNHTDADGNWCDHTEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12767; Mature: 12636
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTTPSPSSIKVEHQIHFTLDGFPCTTSVAGATADQLKVVIDRLKAIGAQPPTTHPAHP CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC TQPVAAVAPPSVPAQRLCPTHGTPLQLRQGTRRGGKPYKFWSCNHTDADGNWCDHTEKP CCCEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure ADTTPSPSSIKVEHQIHFTLDGFPCTTSVAGATADQLKVVIDRLKAIGAQPPTTHPAHP CCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC TQPVAAVAPPSVPAQRLCPTHGTPLQLRQGTRRGGKPYKFWSCNHTDADGNWCDHTEKP CCCEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA