Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897167
Identifier: 159897167
GI number: 159897167
Start: 735840
End: 736532
Strand: Direct
Name: 159897167
Synonym: Haur_0638
Alternate gene names: NA
Gene position: 735840-736532 (Clockwise)
Preceding gene: 159897166
Following gene: 159897170
Centisome position: 11.59
GC content: 45.89
Gene sequence:
>693_bases ATGCAAACAACTATTTCTTGGCGAATTACTTGGATTCTATTGGGCTTATTTGTTGCGATTGTTGGATTGGCGGCTTATCC ACTGCTCCAACATCAACCGCAAAGCCAAGTATTTCGCCGAACAACCCGCGTGCAAATTGACAGTAGCTTGGCGGCTGAAG CTGTTATGTGGGGAATGGATGCGTATTTATTTCCCGATTATGGTGGTGTGGTTACCCATACGACGACGATCAATAATGTT ACAACCACCAGAACCTTCACGCGGCAACAGGATTATTATGGAGTTGTCTTTCACAATACCTTGCAGGCTGGACGAGAATA TGTAGCCTTGGTAGGGCAACCGATCGAACAGGGTGGCATCAAACGCATTAATTTTTATCGAATTGAATATGCTATTGGTG AAGAACAGCTTCAATTTTTGCCGTACCCCTATCGAGGAGTTAAGATTTACACTGGCCTTGAAGTTGGCTATGAGGTTTGT CACTACAACCAACCAACCTGTGAGCCGATCGTTATGACCGATTTCTTAACCGCCGAGCCATCTCCAGCCCGTAAGAAGGC GCTAAGCCACAAGTTTTTCAGCGAAGAGGTCATTCGGCATATGCGCCATGATTTTACAAGCGCATTGATTAATGCTGGGC CTGGCTCGTTTTTTGAGCAGGATGAATGGTTAGGTGCATTGCCTGTCCGTTAA
Upstream 100 bases:
>100_bases CAACGCATGCCCAATGGCTAAACATCCTAGGCTGCTGGTAACGCTGGCCGAGTTGTGGCGTAATGGGGGGTAATCATTAA TCAGAGTTTGGAGAAGAACG
Downstream 100 bases:
>100_bases AACTGTACGCTTATGCTCCAACCCAGTGGGATCGTAGAGCGCGTAGGGCTATTATCAACAACCCTTGGAATGCCCCTGAC CACCACCCCTCGTCCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MQTTISWRITWILLGLFVAIVGLAAYPLLQHQPQSQVFRRTTRVQIDSSLAAEAVMWGMDAYLFPDYGGVVTHTTTINNV TTTRTFTRQQDYYGVVFHNTLQAGREYVALVGQPIEQGGIKRINFYRIEYAIGEEQLQFLPYPYRGVKIYTGLEVGYEVC HYNQPTCEPIVMTDFLTAEPSPARKKALSHKFFSEEVIRHMRHDFTSALINAGPGSFFEQDEWLGALPVR
Sequences:
>Translated_230_residues MQTTISWRITWILLGLFVAIVGLAAYPLLQHQPQSQVFRRTTRVQIDSSLAAEAVMWGMDAYLFPDYGGVVTHTTTINNV TTTRTFTRQQDYYGVVFHNTLQAGREYVALVGQPIEQGGIKRINFYRIEYAIGEEQLQFLPYPYRGVKIYTGLEVGYEVC HYNQPTCEPIVMTDFLTAEPSPARKKALSHKFFSEEVIRHMRHDFTSALINAGPGSFFEQDEWLGALPVR >Mature_230_residues MQTTISWRITWILLGLFVAIVGLAAYPLLQHQPQSQVFRRTTRVQIDSSLAAEAVMWGMDAYLFPDYGGVVTHTTTINNV TTTRTFTRQQDYYGVVFHNTLQAGREYVALVGQPIEQGGIKRINFYRIEYAIGEEQLQFLPYPYRGVKIYTGLEVGYEVC HYNQPTCEPIVMTDFLTAEPSPARKKALSHKFFSEEVIRHMRHDFTSALINAGPGSFFEQDEWLGALPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26264; Mature: 26264
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTISWRITWILLGLFVAIVGLAAYPLLQHQPQSQVFRRTTRVQIDSSLAAEAVMWGMD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECHHHHHHHHHHCCC AYLFPDYGGVVTHTTTINNVTTTRTFTRQQDYYGVVFHNTLQAGREYVALVGQPIEQGGI EEECCCCCCEEEEEEEECCEEECEEEECCCCEEEEEEHHHHHHHHHEEHHHCCCHHCCCC KRINFYRIEYAIGEEQLQFLPYPYRGVKIYTGLEVGYEVCHYNQPTCEPIVMTDFLTAEP EEEEEEEEEEEECCHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCEEEEEEEECCCC SPARKKALSHKFFSEEVIRHMRHDFTSALINAGPGSFFEQDEWLGALPVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQTTISWRITWILLGLFVAIVGLAAYPLLQHQPQSQVFRRTTRVQIDSSLAAEAVMWGMD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECHHHHHHHHHHCCC AYLFPDYGGVVTHTTTINNVTTTRTFTRQQDYYGVVFHNTLQAGREYVALVGQPIEQGGI EEECCCCCCEEEEEEEECCEEECEEEECCCCEEEEEEHHHHHHHHHEEHHHCCCHHCCCC KRINFYRIEYAIGEEQLQFLPYPYRGVKIYTGLEVGYEVCHYNQPTCEPIVMTDFLTAEP EEEEEEEEEEEECCHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCEEEEEEEECCCC SPARKKALSHKFFSEEVIRHMRHDFTSALINAGPGSFFEQDEWLGALPVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA