Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897166
Identifier: 159897166
GI number: 159897166
Start: 735050
End: 735760
Strand: Direct
Name: 159897166
Synonym: Haur_0637
Alternate gene names: NA
Gene position: 735050-735760 (Clockwise)
Preceding gene: 159897162
Following gene: 159897167
Centisome position: 11.58
GC content: 51.2
Gene sequence:
>711_bases ATGAAAATCGCATTTCTATCGGCGCAATGGGCCAATTTAGGCTTATTCTCGTATGCTGTGCCCGATCAATTATTGCAGCC CTATTTGCCAACTGGCTTAGAGCTTGATCGGCGTGATGGTTCGGCGTTTGTTAGTTTGGTGGTGTTTGATTTTCTCCAAA CCAAGGTTTTGGGCCTAGCTTGGCCGGGCTTTCGCAACTTTGCCGAGATGAATTTGCGCTTTTATGTCCGTCGTGGTCAG CAACGTGGCGTGGTTTTTGTGCGCGAGATTGTGCCGCAATGGCTGGTTGCTACCTTGGCCAACGTCATTTATAACGAGCC ATATGTGGCCGCGCCGTTACAGAGCCATACCCAACAGAGTGCCAGCCACATCACGGTTGAGCACAATCTCTACTGGCAAG GCCAAACCAATTTGGTCAAACTGACCGCTAGCAAACAGCTATATCACCCAGCCGCTGATAGCACCGAACATTTTTTCAAG GAGCACGAGTGGGGCTTTGGGCGTAAACGCAATGGTCAGCCAATCATTTATCGGGTTGAGCATCCGGAGTGGGATGTGTA TCCAGTGGAGCGCTATCAACTGCAATTTGATTGGGGCGCGATTTATGGCCCGCAATGGGCTTGGTTGGCCCAGGAAACGC CCTATTCAGTCGTCTTAGCCAAAGGCTCTGCCGTCAAGGTGTTTCCGCATCAACGCATGCCCAATGGCTAA
Upstream 100 bases:
>100_bases GAATCACAATCAGCAGCGAATATTGATTCACGACGTTAAATATTGCACCATCGCAACAATCCCTCAAACTCCAGGCTCTT GAAATTACAAAGGAGCAACG
Downstream 100 bases:
>100_bases ACATCCTAGGCTGCTGGTAACGCTGGCCGAGTTGTGGCGTAATGGGGGGTAATCATTAATCAGAGTTTGGAGAAGAACGA TGCAAACAACTATTTCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKIAFLSAQWANLGLFSYAVPDQLLQPYLPTGLELDRRDGSAFVSLVVFDFLQTKVLGLAWPGFRNFAEMNLRFYVRRGQ QRGVVFVREIVPQWLVATLANVIYNEPYVAAPLQSHTQQSASHITVEHNLYWQGQTNLVKLTASKQLYHPAADSTEHFFK EHEWGFGRKRNGQPIIYRVEHPEWDVYPVERYQLQFDWGAIYGPQWAWLAQETPYSVVLAKGSAVKVFPHQRMPNG
Sequences:
>Translated_236_residues MKIAFLSAQWANLGLFSYAVPDQLLQPYLPTGLELDRRDGSAFVSLVVFDFLQTKVLGLAWPGFRNFAEMNLRFYVRRGQ QRGVVFVREIVPQWLVATLANVIYNEPYVAAPLQSHTQQSASHITVEHNLYWQGQTNLVKLTASKQLYHPAADSTEHFFK EHEWGFGRKRNGQPIIYRVEHPEWDVYPVERYQLQFDWGAIYGPQWAWLAQETPYSVVLAKGSAVKVFPHQRMPNG >Mature_236_residues MKIAFLSAQWANLGLFSYAVPDQLLQPYLPTGLELDRRDGSAFVSLVVFDFLQTKVLGLAWPGFRNFAEMNLRFYVRRGQ QRGVVFVREIVPQWLVATLANVIYNEPYVAAPLQSHTQQSASHITVEHNLYWQGQTNLVKLTASKQLYHPAADSTEHFFK EHEWGFGRKRNGQPIIYRVEHPEWDVYPVERYQLQFDWGAIYGPQWAWLAQETPYSVVLAKGSAVKVFPHQRMPNG
Specific function: Unknown
COG id: COG3361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27253; Mature: 27253
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAFLSAQWANLGLFSYAVPDQLLQPYLPTGLELDRRDGSAFVSLVVFDFLQTKVLGLA CEEEEEECCCCCCCEEEECCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEE WPGFRNFAEMNLRFYVRRGQQRGVVFVREIVPQWLVATLANVIYNEPYVAAPLQSHTQQS CCCCCCHHHCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCC ASHITVEHNLYWQGQTNLVKLTASKQLYHPAADSTEHFFKEHEWGFGRKRNGQPIIYRVE CCEEEEEEEEEECCCCCEEEEEECCEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEE HPEWDVYPVERYQLQFDWGAIYGPQWAWLAQETPYSVVLAKGSAVKVFPHQRMPNG CCCCCCEECEEEEEEECCCEEECCCEEEEECCCCEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure MKIAFLSAQWANLGLFSYAVPDQLLQPYLPTGLELDRRDGSAFVSLVVFDFLQTKVLGLA CEEEEEECCCCCCCEEEECCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEE WPGFRNFAEMNLRFYVRRGQQRGVVFVREIVPQWLVATLANVIYNEPYVAAPLQSHTQQS CCCCCCHHHCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCC ASHITVEHNLYWQGQTNLVKLTASKQLYHPAADSTEHFFKEHEWGFGRKRNGQPIIYRVE CCEEEEEEEEEECCCCCEEEEEECCEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEE HPEWDVYPVERYQLQFDWGAIYGPQWAWLAQETPYSVVLAKGSAVKVFPHQRMPNG CCCCCCEECEEEEEEECCCEEECCCEEEEECCCCEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA