Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is uhpB [C]
Identifier: 159897131
GI number: 159897131
Start: 691823
End: 693577
Strand: Direct
Name: uhpB [C]
Synonym: Haur_0602
Alternate gene names: 159897131
Gene position: 691823-693577 (Clockwise)
Preceding gene: 159897130
Following gene: 159897132
Centisome position: 10.9
GC content: 51.4
Gene sequence:
>1755_bases ATGTCTATCTCCGTCCCACGCATTACACCACGACTATTAATGTCCGGTGATCCATTATTTAGCTTGGTGCGGTTGATTAG CCTTGGCTTGATTTTGGTCGTCGGCGCTCGCATCGATCAACACACGGTTATTCCGCCAACCACCCCATTTGGCCTAATTT GGTGGGCCTATGCGATCTATGGTTTAGTGATGGCTGGCTCGGCTTTTGTGCCCCGCTTTCGCAACTTGCCCTCGTGGATC TTTATTGTTGATTTTGGCTTTATTGCGCTCTTTGCCTTGTTTAGCGGTCTGCCCCCCGCCTTGTTGGTAGCGTTGATTAT GTTGCCAACTGTGTGGGCTTCAACCAATCGTTCGCCTGCCCAAGCAGTTGGTACGGGTGTGGGCGCAGCGATTGTCTATG CTGGCATTACGCTATATCGGCGCTTTGGCGATGCTGGCAATGTTGGCAGCGAAGAGATGTTTGTTAGCATTGCAGTCAAC TGTACAGCTTTGATTTTAGTTTCGTGGTTGGTCAGCACGCTTTCTGGTCAGTCCAGCGAGATCAATCGCGAACATGTGAT TGCCGCACGGCGTGATGTCGATAGTGCTCAGCGTGATGCCGAAGCGTATCGCGACCGCATGCGAGCACTCTACGAAGTTG CCTATAAACTTAGTACTACCATGAATTTTCAAACGGTGCTTGATGCCACCGTGACCGAATCGATTCGTTTGATCAATGGC CGCAGTAGCGTGGTGCTGTTACCAACTGGCGAGCCAGATGAATTGTATGTTGCTGCTGGCGTTGGAGTTGGCTCTGGTGA TCTCAATTTGCGGATTGCGATTGAGCCAACTGGAATTATGGCCTCGATTCTGGCCTCAGGCACGCCGCGCATTTTGAACG ATTTGCGCCAATCACATGCCTTGAGCAGCGTACCATCGATGCAAAACTGTGCGTGTGTTTGTTGTGTGCCGCTGAGCGCA GGCCGCCGCAACTATGGCATCGTGGTCGTCGGGGTTGATCGTAACGAAATCAATGAAGATGAATTGGGTATGGTTTCGGC CTTGGCCAATTACGCAATTATTGCCATGCTCAATGCCCAATTGGTTGGCGAATTACGCGATGAACGCACCAAACTGATTA GCAAAGAAGAAGAAGTGCGCCAACAACTTGCCCGCGATTTGCACGATGGCCCCGCTCAATCAGTGGCCGCCATCACCATG AATATTGAATTTGTCAAGCGTTTATTGGAGCGCGAACCAAGCCGCGTGATGCAAGAGCTGACCAAAATGGGCGAATTAGC CCGCCGCACCACCTATGATATTCGCACGCTTTTGTTCGAGTTGCGCCCCTTGACTCTGGATAGCCAAGGCCTCGTTGCGA CCCTGCGCGAATATGTAACCCGCTTCAAAGATGGCACGACCCAGGTAATCCTCGAAGAAACCGTCGGCGAGTTGCGGCTT GATGCCAAACGTGAAGGCACCTTGTTCAATATTATTCAAGAAGCTAGCAACAATGCCATGAAACATGCCCAAGCCAAACA CATCTGGATTCGGCTAACCCGCCAAGGCGATGAGTTGATGGCGACAGTGCAGGATGATGGCAAAGGCTTCGATTTGCAAG CAGTTCGGGCTAACTACAGCAAACGTGGCTCGTTTGGCCTCTTAAATATTGATGAACGGGCACGCATGGTTGGCGGGAGT GCCGAAATGACCTCAGCAGTTGGCGCTGGTACAACCGTTCGGGTTATTGTACCGCTTGATGCCAGTAGTATTTAG
Upstream 100 bases:
>100_bases AAAATTCTCAAAGAGCAGCTCTACCAAGCTGCAATCGAGGGCGAACCACTGATTGACGGAATTTCCTTCTAAGATAGTTA GTGCCGAGGAAGATTCAACC
Downstream 100 bases:
>100_bases ATAATGAATCTACTGACCCCGCGACGAGTGCTCGTCGCGGGGTTTTATAGTTAATTGCCTTCATCCCAACCCCGCTCTCA CTGCGGCGGGCGAGGGTAAG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MSISVPRITPRLLMSGDPLFSLVRLISLGLILVVGARIDQHTVIPPTTPFGLIWWAYAIYGLVMAGSAFVPRFRNLPSWI FIVDFGFIALFALFSGLPPALLVALIMLPTVWASTNRSPAQAVGTGVGAAIVYAGITLYRRFGDAGNVGSEEMFVSIAVN CTALILVSWLVSTLSGQSSEINREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDATVTESIRLING RSSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHALSSVPSMQNCACVCCVPLSA GRRNYGIVVVGVDRNEINEDELGMVSALANYAIIAMLNAQLVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITM NIEFVKRLLEREPSRVMQELTKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGTTQVILEETVGELRL DAKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYSKRGSFGLLNIDERARMVGGS AEMTSAVGAGTTVRVIVPLDASSI
Sequences:
>Translated_584_residues MSISVPRITPRLLMSGDPLFSLVRLISLGLILVVGARIDQHTVIPPTTPFGLIWWAYAIYGLVMAGSAFVPRFRNLPSWI FIVDFGFIALFALFSGLPPALLVALIMLPTVWASTNRSPAQAVGTGVGAAIVYAGITLYRRFGDAGNVGSEEMFVSIAVN CTALILVSWLVSTLSGQSSEINREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDATVTESIRLING RSSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHALSSVPSMQNCACVCCVPLSA GRRNYGIVVVGVDRNEINEDELGMVSALANYAIIAMLNAQLVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITM NIEFVKRLLEREPSRVMQELTKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGTTQVILEETVGELRL DAKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYSKRGSFGLLNIDERARMVGGS AEMTSAVGAGTTVRVIVPLDASSI >Mature_583_residues SISVPRITPRLLMSGDPLFSLVRLISLGLILVVGARIDQHTVIPPTTPFGLIWWAYAIYGLVMAGSAFVPRFRNLPSWIF IVDFGFIALFALFSGLPPALLVALIMLPTVWASTNRSPAQAVGTGVGAAIVYAGITLYRRFGDAGNVGSEEMFVSIAVNC TALILVSWLVSTLSGQSSEINREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDATVTESIRLINGR SSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHALSSVPSMQNCACVCCVPLSAG RRNYGIVVVGVDRNEINEDELGMVSALANYAIIAMLNAQLVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITMN IEFVKRLLEREPSRVMQELTKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGTTQVILEETVGELRLD AKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYSKRGSFGLLNIDERARMVGGSA EMTSAVGAGTTVRVIVPLDASSI
Specific function: Member Of The Two-Component Regulatory System Uhpb/Uhpa Involved In The Regulation Of The Uptake Of Hexose Phosphates. Uhpb Functions As A Membrane-Associated Protein Kinase That Phosphorylates Uhpa In Response To Environmental Signals. [C]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=230, Percent_Identity=29.1304347826087, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788812, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787474, Length=264, Percent_Identity=26.1363636363636, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 63730; Mature: 63598
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISVPRITPRLLMSGDPLFSLVRLISLGLILVVGARIDQHTVIPPTTPFGLIWWAYAIY CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH GLVMAGSAFVPRFRNLPSWIFIVDFGFIALFALFSGLPPALLVALIMLPTVWASTNRSPA HHHHCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH QAVGTGVGAAIVYAGITLYRRFGDAGNVGSEEMFVSIAVNCTALILVSWLVSTLSGQSSE HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCC INREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDATVTESIRLING CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECC RSSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHA CCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHH LSSVPSMQNCACVCCVPLSAGRRNYGIVVVGVDRNEINEDELGMVSALANYAIIAMLNAQ HHCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITMNIEFVKRLLEREPSRVMQEL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHH TKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGTTQVILEETVGELRL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHEE DAKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYS CCCCCCHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCEEEEEEECCCCCCEEHHHHCCCC KRGSFGLLNIDERARMVGGSAEMTSAVGAGTTVRVIVPLDASSI CCCCEEEEEHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure SISVPRITPRLLMSGDPLFSLVRLISLGLILVVGARIDQHTVIPPTTPFGLIWWAYAIY CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH GLVMAGSAFVPRFRNLPSWIFIVDFGFIALFALFSGLPPALLVALIMLPTVWASTNRSPA HHHHCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH QAVGTGVGAAIVYAGITLYRRFGDAGNVGSEEMFVSIAVNCTALILVSWLVSTLSGQSSE HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCC INREHVIAARRDVDSAQRDAEAYRDRMRALYEVAYKLSTTMNFQTVLDATVTESIRLING CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECC RSSVVLLPTGEPDELYVAAGVGVGSGDLNLRIAIEPTGIMASILASGTPRILNDLRQSHA CCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHH LSSVPSMQNCACVCCVPLSAGRRNYGIVVVGVDRNEINEDELGMVSALANYAIIAMLNAQ HHCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVGELRDERTKLISKEEEVRQQLARDLHDGPAQSVAAITMNIEFVKRLLEREPSRVMQEL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHH TKMGELARRTTYDIRTLLFELRPLTLDSQGLVATLREYVTRFKDGTTQVILEETVGELRL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHEE DAKREGTLFNIIQEASNNAMKHAQAKHIWIRLTRQGDELMATVQDDGKGFDLQAVRANYS CCCCCCHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCEEEEEEECCCCCCEEHHHHCCCC KRGSFGLLNIDERARMVGGSAEMTSAVGAGTTVRVIVPLDASSI CCCCEEEEEHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661927 [H]