Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897013
Identifier: 159897013
GI number: 159897013
Start: 559868
End: 560596
Strand: Direct
Name: 159897013
Synonym: Haur_0481
Alternate gene names: NA
Gene position: 559868-560596 (Clockwise)
Preceding gene: 159897011
Following gene: 159897014
Centisome position: 8.82
GC content: 39.92
Gene sequence:
>729_bases TTGGCTGCTGCACAAGCGCCTCAATCATATCAGCCAATCGCTCGCCCTACGGTTATCCCATCCGTTAATACAAGCATGGC AACTCCAACAACCAAGCCAATTGCCCCAACATCAATCCAGCTTTCGCCAAACTCGGCTAGGAGTATGCTTCAGCCAAATC GCCAGCAATTATTGGCACAGCTGCAAATGTTTGCTTATGGCCTGATTGGCTTAGGAGCAGTCATTCTGGTTGGGTTAATC TTTGGTCTCTTTGTTAAAGGAGGCCTGAGCGGCGATTTAGGGGGTATTTTAGGTGGTGGGGTTGAGATTGGAGGCAGTGC TATCCATCTTTTGCTGTTATTACTTGCAACTTTATTTGAGGCGGGATTATCCAATGGAGGGATTATCGCCTTCGTTGTAA TTATTATCATCCTGCTATTGCCTGCATATGCAATTTTTGCTATTACAACTGGCTCAAAAATCGCTAAGGCAATTATATTA AATCAAATGCCCTATTCTATAAAAAATCTTCAAATATTTAGCGGAATAATGATCGGATTTTTTGGATTGATCTATGCATT AACTAATATTCAATTTAAGATGAATAGTAATGGGTTAGGAGGCTTTGGCGCGGAGGCTGGAATTGGTTTAGGATGGGGAT TTACATTAAGTCTTTTCATAATGTTAGGAATATTTATTGGCTGTATTTGGTATAAAAATATAGCATTAAAACTTTTAGTT AACCCATAA
Upstream 100 bases:
>100_bases TTTTATGCCGGTTGTTGGAACTGCTCCCGTAAAGCCGTGCCCTCAATGTCAATTTCGTAATAAGTCTAGCGCAACATGTT GCCAAAAGTGTGGGCAAAAT
Downstream 100 bases:
>100_bases AGGAGCAATTATGGAATACGGATTAGAAAGCCCAATCAACTACGAACAAAAATGTCTGTGCATTCTAGTTGTTGATACAT CAGGATCGATGCAAGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAAAQAPQSYQPIARPTVIPSVNTSMATPTTKPIAPTSIQLSPNSARSMLQPNRQQLLAQLQMFAYGLIGLGAVILVGLI FGLFVKGGLSGDLGGILGGGVEIGGSAIHLLLLLLATLFEAGLSNGGIIAFVVIIIILLLPAYAIFAITTGSKIAKAIIL NQMPYSIKNLQIFSGIMIGFFGLIYALTNIQFKMNSNGLGGFGAEAGIGLGWGFTLSLFIMLGIFIGCIWYKNIALKLLV NP
Sequences:
>Translated_242_residues MAAAQAPQSYQPIARPTVIPSVNTSMATPTTKPIAPTSIQLSPNSARSMLQPNRQQLLAQLQMFAYGLIGLGAVILVGLI FGLFVKGGLSGDLGGILGGGVEIGGSAIHLLLLLLATLFEAGLSNGGIIAFVVIIIILLLPAYAIFAITTGSKIAKAIIL NQMPYSIKNLQIFSGIMIGFFGLIYALTNIQFKMNSNGLGGFGAEAGIGLGWGFTLSLFIMLGIFIGCIWYKNIALKLLV NP >Mature_241_residues AAAQAPQSYQPIARPTVIPSVNTSMATPTTKPIAPTSIQLSPNSARSMLQPNRQQLLAQLQMFAYGLIGLGAVILVGLIF GLFVKGGLSGDLGGILGGGVEIGGSAIHLLLLLLATLFEAGLSNGGIIAFVVIIIILLLPAYAIFAITTGSKIAKAIILN QMPYSIKNLQIFSGIMIGFFGLIYALTNIQFKMNSNGLGGFGAEAGIGLGWGFTLSLFIMLGIFIGCIWYKNIALKLLVN P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25325; Mature: 25194
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAQAPQSYQPIARPTVIPSVNTSMATPTTKPIAPTSIQLSPNSARSMLQPNRQQLLAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHH LQMFAYGLIGLGAVILVGLIFGLFVKGGLSGDLGGILGGGVEIGGSAIHLLLLLLATLFE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCHHHHHHHHHHHHHHHH AGLSNGGIIAFVVIIIILLLPAYAIFAITTGSKIAKAIILNQMPYSIKNLQIFSGIMIGF HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FGLIYALTNIQFKMNSNGLGGFGAEAGIGLGWGFTLSLFIMLGIFIGCIWYKNIALKLLV HHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE NP CC >Mature Secondary Structure AAAQAPQSYQPIARPTVIPSVNTSMATPTTKPIAPTSIQLSPNSARSMLQPNRQQLLAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHH LQMFAYGLIGLGAVILVGLIFGLFVKGGLSGDLGGILGGGVEIGGSAIHLLLLLLATLFE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCHHHHHHHHHHHHHHHH AGLSNGGIIAFVVIIIILLLPAYAIFAITTGSKIAKAIILNQMPYSIKNLQIFSGIMIGF HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FGLIYALTNIQFKMNSNGLGGFGAEAGIGLGWGFTLSLFIMLGIFIGCIWYKNIALKLLV HHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE NP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA