Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is yegL [H]
Identifier: 159897014
GI number: 159897014
Start: 560607
End: 561275
Strand: Direct
Name: yegL [H]
Synonym: Haur_0482
Alternate gene names: 159897014
Gene position: 560607-561275 (Clockwise)
Preceding gene: 159897013
Following gene: 159897015
Centisome position: 8.83
GC content: 42.45
Gene sequence:
>669_bases ATGGAATACGGATTAGAAAGCCCAATCAACTACGAACAAAAATGTCTGTGCATTCTAGTTGTTGATACATCAGGATCGAT GCAAGGCAGGCCTATTGATGAATTGAATCAAGGTTTACAAGTATTTCATCAAGATATTAGCAATAGTTTTTCAACTGCCC AACGACTAGAAATCTGCCTTGTTGAATTCAATAGTCAAGCTGATTGTATTGTTGAGCCTAGCTTAGTCGATCAATTTCAT ATGCCGATTTTGGCTGTTGCTGGCACAACCAAGTTGGTTGATGGGGTTAGGCTAGCGATTCATAAAGTCCAGGAACGCAA AAGCTGGTATCGTTCAACCGGACAACCCTATTATCGGCCTTGGATTATTTTAATGACTGATGGTGAGCCAGATAGCGATC AAGATGTGGCTGGCTTGGCGCGTGAGATTCAGCATGGGGTCAACAATAAACAATTTGTCTTTTTTCCAATTGGGGTACAA GGGGCTGATATGCGTATGTTGCAACAGATTAGCACCCCTGATCGTCCTCCGATGCTGTTGCAAGGTTTACGCTTTGAAGC ATTTTTTGACTGGTTAAGTGCAAGCCTATCAATGGTTGCCAGTTCAACTGATGGTCAAGTTATTCAGTTACCATCAACAA GCGGTTGGGGAATTCTTCCCGTATCCTAA
Upstream 100 bases:
>100_bases TTTACATTAAGTCTTTTCATAATGTTAGGAATATTTATTGGCTGTATTTGGTATAAAAATATAGCATTAAAACTTTTAGT TAACCCATAAAGGAGCAATT
Downstream 100 bases:
>100_bases AATTGGTTGAGGTTAGTCGGCCAAAACTGACTAACCTCTTTTTTAAGGATGATCTGATGAAACAGAATCAACGACCGCTT ATTTTTGGGTTATTTACGCT
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MEYGLESPINYEQKCLCILVVDTSGSMQGRPIDELNQGLQVFHQDISNSFSTAQRLEICLVEFNSQADCIVEPSLVDQFH MPILAVAGTTKLVDGVRLAIHKVQERKSWYRSTGQPYYRPWIILMTDGEPDSDQDVAGLAREIQHGVNNKQFVFFPIGVQ GADMRMLQQISTPDRPPMLLQGLRFEAFFDWLSASLSMVASSTDGQVIQLPSTSGWGILPVS
Sequences:
>Translated_222_residues MEYGLESPINYEQKCLCILVVDTSGSMQGRPIDELNQGLQVFHQDISNSFSTAQRLEICLVEFNSQADCIVEPSLVDQFH MPILAVAGTTKLVDGVRLAIHKVQERKSWYRSTGQPYYRPWIILMTDGEPDSDQDVAGLAREIQHGVNNKQFVFFPIGVQ GADMRMLQQISTPDRPPMLLQGLRFEAFFDWLSASLSMVASSTDGQVIQLPSTSGWGILPVS >Mature_222_residues MEYGLESPINYEQKCLCILVVDTSGSMQGRPIDELNQGLQVFHQDISNSFSTAQRLEICLVEFNSQADCIVEPSLVDQFH MPILAVAGTTKLVDGVRLAIHKVQERKSWYRSTGQPYYRPWIILMTDGEPDSDQDVAGLAREIQHGVNNKQFVFFPIGVQ GADMRMLQQISTPDRPPMLLQGLRFEAFFDWLSASLSMVASSTDGQVIQLPSTSGWGILPVS
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
Organism=Escherichia coli, GI1788388, Length=208, Percent_Identity=43.2692307692308, Blast_Score=144, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011392 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 24783; Mature: 24783
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYGLESPINYEQKCLCILVVDTSGSMQGRPIDELNQGLQVFHQDISNSFSTAQRLEICL CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VEFNSQADCIVEPSLVDQFHMPILAVAGTTKLVDGVRLAIHKVQERKSWYRSTGQPYYRP EEECCCCCEEECCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE WIILMTDGEPDSDQDVAGLAREIQHGVNNKQFVFFPIGVQGADMRMLQQISTPDRPPMLL EEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHH QGLRFEAFFDWLSASLSMVASSTDGQVIQLPSTSGWGILPVS HHCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECC >Mature Secondary Structure MEYGLESPINYEQKCLCILVVDTSGSMQGRPIDELNQGLQVFHQDISNSFSTAQRLEICL CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VEFNSQADCIVEPSLVDQFHMPILAVAGTTKLVDGVRLAIHKVQERKSWYRSTGQPYYRP EEECCCCCEEECCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE WIILMTDGEPDSDQDVAGLAREIQHGVNNKQFVFFPIGVQGADMRMLQQISTPDRPPMLL EEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHH QGLRFEAFFDWLSASLSMVASSTDGQVIQLPSTSGWGILPVS HHCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]