Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897004
Identifier: 159897004
GI number: 159897004
Start: 552040
End: 552270
Strand: Direct
Name: 159897004
Synonym: Haur_0472
Alternate gene names: NA
Gene position: 552040-552270 (Clockwise)
Preceding gene: 159897003
Following gene: 159897005
Centisome position: 8.7
GC content: 56.71
Gene sequence:
>231_bases ATGCGCAAACAAATTTTGGCTAGTCTCTTAGTTTTGGCAATCTTGGCTGGTTGTTCAACCACAGGTTCGGCTCCAACCAC CGCTCCGGTGGTCAGCCAACCAACCAGTGCTGCTCCAGCGGCAACTCCAGCAACCTACCCAACCCCAGCCGAGGGCAATG TGGTCGTCGAACCAACCTTGGAGCCAGCCCAATACCCAGTGCCACAAGCCTATCCGGCTCCAACTCCCTAG
Upstream 100 bases:
>100_bases CATGGTTTAAAAGATTAAGCTCAGTTAAACCAAAGCTTTGACTTTTTATCTCCGCTACGGTAGCATAACCTGCGATTGAA ACCCATGGAGGTTCTTACAG
Downstream 100 bases:
>100_bases GTTGCACGGGCTTGGTGGTAGTGATATACTGTAACCAGAATGAAGTACACAGACCGAAACGTGGGTGTCCCCCACGTTTC TTCTTGTCAGCAATGTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MRKQILASLLVLAILAGCSTTGSAPTTAPVVSQPTSAAPAATPATYPTPAEGNVVVEPTLEPAQYPVPQAYPAPTP
Sequences:
>Translated_76_residues MRKQILASLLVLAILAGCSTTGSAPTTAPVVSQPTSAAPAATPATYPTPAEGNVVVEPTLEPAQYPVPQAYPAPTP >Mature_76_residues MRKQILASLLVLAILAGCSTTGSAPTTAPVVSQPTSAAPAATPATYPTPAEGNVVVEPTLEPAQYPVPQAYPAPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7612; Mature: 7612
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQILASLLVLAILAGCSTTGSAPTTAPVVSQPTSAAPAATPATYPTPAEGNVVVEPTL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC EPAQYPVPQAYPAPTP CCCCCCCCCCCCCCCC >Mature Secondary Structure MRKQILASLLVLAILAGCSTTGSAPTTAPVVSQPTSAAPAATPATYPTPAEGNVVVEPTL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC EPAQYPVPQAYPAPTP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA