Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896990
Identifier: 159896990
GI number: 159896990
Start: 535233
End: 535799
Strand: Direct
Name: 159896990
Synonym: Haur_0458
Alternate gene names: NA
Gene position: 535233-535799 (Clockwise)
Preceding gene: 159896989
Following gene: 159896994
Centisome position: 8.43
GC content: 43.74
Gene sequence:
>567_bases ATGCAACGTTTGATCGTAGCTATGCTGCTGTTGGTGATCCTCATCGGTTGTCGCCAACAACAAACAACCCAGCCGCTTAC TCCTTCGCCAATCAATAGTATTGATTCACGGAAGATTGAGGCAATCATTCTTAAGCCATTTCAGAATGAGCAGATTCAGA ATCTTCAAATGTATCCAGTGGCAGGGCTTAACGAGGGAATGCTGTTTGTGTATCAGCTCGATTCAGCAAGAGGCAAAGCA ATTGGTTTGTTGACTGGAGTTGAAACTTTAGGCGAATTCTCAATCCGTAGCCAGTCCCTTGATATTCTTGGGCCTCAGAA GCCGTATGGTTTTTATCTGAGCAATGATGGTGGACAACCAAATTACATTGGCTATGGCTATATTCAACATCCAGAAACGA TTAAGCAACTGCGAATTATATTGAGCGATGGTAACAGCTTGGTTGTTACTGGGAATACGATTACTGGCTTGGTCATGCCC AAACATAATCCGCCAATTCGACTAGAAGTTGTGGGAATAGATGGCACGATCATTGAACAGAATCCAATCACGCTTCCCAC TCCTTGA
Upstream 100 bases:
>100_bases TAGATCCAAGAATATAAATTACCACTTGTAAGTAATGTCGATCATCCCTCGTGGTGAACACATCAATCAAAGCCCGAGGG ATGATCAAAGAAAGTAGGTT
Downstream 100 bases:
>100_bases AATGTTTAGCCACCCCAAACCTCGTTTTCGTGGCGCACGATCATGCTAATTGGCAAAATGGTATTTTCGCTGCTAGGAGT TTTGCCTTCGATCAGCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP KHNPPIRLEVVGIDGTIIEQNPITLPTP
Sequences:
>Translated_188_residues MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP KHNPPIRLEVVGIDGTIIEQNPITLPTP >Mature_188_residues MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP KHNPPIRLEVVGIDGTIIEQNPITLPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20679; Mature: 20679
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPV CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC AGLNEGMLFVYQLDSARGKAIGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQP CCCCCCEEEEEEECCCCCCEEEEEECHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCC NYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMPKHNPPIRLEVVGIDGTIIEQ CEEEEEEEECCHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCEEECC NPITLPTP CCEECCCC >Mature Secondary Structure MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPV CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC AGLNEGMLFVYQLDSARGKAIGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQP CCCCCCEEEEEEECCCCCCEEEEEECHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCC NYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMPKHNPPIRLEVVGIDGTIIEQ CEEEEEEEECCHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCEEECC NPITLPTP CCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA