Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896994

Identifier: 159896994

GI number: 159896994

Start: 539504

End: 540505

Strand: Direct

Name: 159896994

Synonym: Haur_0462

Alternate gene names: NA

Gene position: 539504-540505 (Clockwise)

Preceding gene: 159896990

Following gene: 159896995

Centisome position: 8.5

GC content: 49.3

Gene sequence:

>1002_bases
ATGAATTTTCGTGAATATCGGATTGCTGCGCCGAATGTGCGCTCGTTATGTTGGCATGACCAGAGCTTGGTCGATTGGGT
AGCTGGTGGCACGCGCTATCAGTTGGATGGCCCGATTAAACGTTCATCAACGGTCTATCCGTTTGGCTTTGATGCGGCGG
TGCAATCGGCTTCAGGTGAGGTCGTGGTAATTTATCAGCGCTTAGGAACCAAGGGTTTAGTGCTTAACAATGGCCAAATT
GTGCGCGAAATTAACCGCAGCTACTACTACGCCGACAGCTATGAGTATCCCATCGCGATTCTTCAACATGCCGATTTGAA
TGAAGTATTGGTGCATTGCCCCGAAAAATACAATCAACTTGAGCTTGAAGATGTTGTCACAAATCGACGACTGAATGAAG
CCGAACGCAAGCCAGTCGAGATTTTTCATTCGCGATTAAGTGTTAGCCCCAAAGGCAAATGGTTGGTGAGCGCTGGTTGG
CAGTGGCAACCGACCCATACCGTGGCAATTTACAACGTTGATGAGATCTGGGCACAACCGCAAATCCTCGATACTGAAGG
TTTTTGTCCGTCAATTCAAGTCGATATTAGCTCGGTCAGCTTTTTAGATGAACAAACCCTGCTGATTATCACCGATGAAT
TTGCTAACCTGAGTGCCGATTTGGTTGATACGCTGGTACAACGACGCGGCGCACATAGCATCGGCTACTACGATCTGCTC
AATCGCCAATTTCGCGCCACCGTCGAGGCCGAGGAGATTGTGGGCACAGCTATGGCGCTGAGCGAACGCTATGTGGTTGG
TTTTTACGATCATCCAAAATTGTTCGATTGTACCACGGGCAAGGTTGTGCAGCGCTGGCCCGATTTAGCCACAGGCCGTC
AAACCCATAGCATGATCGGCAGGCTTGATCAATCCATCCCGCCAATCGCCTTTGATCAAGCTAACCAACGTTTTGCGGTG
GCCGATGCCAAGGGCATTACGGTGATTGAATTGAGTTTATAG

Upstream 100 bases:

>100_bases
CATAGCAGTTAATGCGATGCAATAGACTTATTGCAATGATTTTATTAACGTGGCATGGCTGCTGCTTTAGCCTAAATTGC
CCAAAATAGTTGAGGTTGAT

Downstream 100 bases:

>100_bases
GGCTAATAACAGCAGTTCTCGCCCTCAGTTAACTACATTCTCCATCAATCGATGGTTAATACAAGGAGATTCTTCTTATA
CTATAGTGGGCAACGAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNFREYRIAAPNVRSLCWHDQSLVDWVAGGTRYQLDGPIKRSSTVYPFGFDAAVQSASGEVVVIYQRLGTKGLVLNNGQI
VREINRSYYYADSYEYPIAILQHADLNEVLVHCPEKYNQLELEDVVTNRRLNEAERKPVEIFHSRLSVSPKGKWLVSAGW
QWQPTHTVAIYNVDEIWAQPQILDTEGFCPSIQVDISSVSFLDEQTLLIITDEFANLSADLVDTLVQRRGAHSIGYYDLL
NRQFRATVEAEEIVGTAMALSERYVVGFYDHPKLFDCTTGKVVQRWPDLATGRQTHSMIGRLDQSIPPIAFDQANQRFAV
ADAKGITVIELSL

Sequences:

>Translated_333_residues
MNFREYRIAAPNVRSLCWHDQSLVDWVAGGTRYQLDGPIKRSSTVYPFGFDAAVQSASGEVVVIYQRLGTKGLVLNNGQI
VREINRSYYYADSYEYPIAILQHADLNEVLVHCPEKYNQLELEDVVTNRRLNEAERKPVEIFHSRLSVSPKGKWLVSAGW
QWQPTHTVAIYNVDEIWAQPQILDTEGFCPSIQVDISSVSFLDEQTLLIITDEFANLSADLVDTLVQRRGAHSIGYYDLL
NRQFRATVEAEEIVGTAMALSERYVVGFYDHPKLFDCTTGKVVQRWPDLATGRQTHSMIGRLDQSIPPIAFDQANQRFAV
ADAKGITVIELSL
>Mature_333_residues
MNFREYRIAAPNVRSLCWHDQSLVDWVAGGTRYQLDGPIKRSSTVYPFGFDAAVQSASGEVVVIYQRLGTKGLVLNNGQI
VREINRSYYYADSYEYPIAILQHADLNEVLVHCPEKYNQLELEDVVTNRRLNEAERKPVEIFHSRLSVSPKGKWLVSAGW
QWQPTHTVAIYNVDEIWAQPQILDTEGFCPSIQVDISSVSFLDEQTLLIITDEFANLSADLVDTLVQRRGAHSIGYYDLL
NRQFRATVEAEEIVGTAMALSERYVVGFYDHPKLFDCTTGKVVQRWPDLATGRQTHSMIGRLDQSIPPIAFDQANQRFAV
ADAKGITVIELSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37688; Mature: 37688

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFREYRIAAPNVRSLCWHDQSLVDWVAGGTRYQLDGPIKRSSTVYPFGFDAAVQSASGE
CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCEECCCCHHHHHHCCCCC
VVVIYQRLGTKGLVLNNGQIVREINRSYYYADSYEYPIAILQHADLNEVLVHCPEKYNQL
EEEEEECCCCCEEEEECCHHHEECCCCEEEECCCCCCEEEEECCCHHHHHHHCCHHCCCE
ELEDVVTNRRLNEAERKPVEIFHSRLSVSPKGKWLVSAGWQWQPTHTVAIYNVDEIWAQP
EHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCCCEEEECCCEECCCEEEEEEEHHHHHCCC
QILDTEGFCPSIQVDISSVSFLDEQTLLIITDEFANLSADLVDTLVQRRGAHSIGYYDLL
EEECCCCCCCEEEEEECCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRQFRATVEAEEIVGTAMALSERYVVGFYDHPKLFDCTTGKVVQRWPDLATGRQTHSMIG
CHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHCCCCCCCHHHHHHHH
RLDQSIPPIAFDQANQRFAVADAKGITVIELSL
HHHHCCCCEEECCCCCEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MNFREYRIAAPNVRSLCWHDQSLVDWVAGGTRYQLDGPIKRSSTVYPFGFDAAVQSASGE
CCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCEECCCCHHHHHHCCCCC
VVVIYQRLGTKGLVLNNGQIVREINRSYYYADSYEYPIAILQHADLNEVLVHCPEKYNQL
EEEEEECCCCCEEEEECCHHHEECCCCEEEECCCCCCEEEEECCCHHHHHHHCCHHCCCE
ELEDVVTNRRLNEAERKPVEIFHSRLSVSPKGKWLVSAGWQWQPTHTVAIYNVDEIWAQP
EHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCCCEEEECCCEECCCEEEEEEEHHHHHCCC
QILDTEGFCPSIQVDISSVSFLDEQTLLIITDEFANLSADLVDTLVQRRGAHSIGYYDLL
EEECCCCCCCEEEEEECCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRQFRATVEAEEIVGTAMALSERYVVGFYDHPKLFDCTTGKVVQRWPDLATGRQTHSMIG
CHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHCCCCCCCHHHHHHHH
RLDQSIPPIAFDQANQRFAVADAKGITVIELSL
HHHHCCCCEEECCCCCEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA