Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896981
Identifier: 159896981
GI number: 159896981
Start: 526132
End: 527535
Strand: Direct
Name: 159896981
Synonym: Haur_0449
Alternate gene names: NA
Gene position: 526132-527535 (Clockwise)
Preceding gene: 159896980
Following gene: 159896983
Centisome position: 8.29
GC content: 51.42
Gene sequence:
>1404_bases ATGACTAAATTGCGGTGGCTTAGCCTGCTCATTCTTGGTTCGATCATCTACTGGCTTTTGCCAATCGACGGCAATTTAGT GCTTCAGACCAACCAACAAGCTGGTTGGCCCCAAATTTGGTTTGAACGCGATACCCAAGATCAACAATGGATTTATGTGC GCGATAATCAGCCATGGGTTTATGTCGCTTTGACGCTTGATGGCACGAGTTTACAGCGTGATCAGCAATTTGCGGCTGGT AGTGAGCCATGGACTTGGCGTTGGAGCAGCACTAGCAATACTTTAACCCAAGCCGATATTCGCTTTTATCACGATTGCGA TCGTGGTTGCCAAGAACGTGGCAGTCTGATGATTGGTCAGCCTGAGCCAACCGCTACTCCGCGCCAAAGTAGCCTGCTTG GCGCAATGTTTGCCAACCCCGATCGCGATTGGCATGGTCGGGCGGCGTGGTCGGTAGATTTGGTGTATGCGCTGCGAGCC GATGAGAGCCAATGGAGTGTTGATGCCCTAGCTTCGCGGGTGGCGGCGGCACATAAGGCTGGATTGCGGGTGATTATCCG CGTTGCCTATGATCAAGGCCAAAGTTTGCCACCAAATAATGATGAAACGGCCTTGGCGATCTTTTTGCGCTTTTGCCAGC GCTTGGCCCACGATCAACGTTTGCAGGCAGTCTATGGTTATAGCATTGGCAATGGTTACAATAGCTTGGGTGAAAATAGC CTCAGCCAAGAACCGCTGACTCCTGCGTGGGTAGCACGAATCTTAGTTGGGTATGGCGTTGCAACCGAACGCCACGATAA TGTGATTGAAACCATGCGCGGTTTGAATCCCCAATTGAAACTGCTGGTTGGGCCAGTGCGGCCTTGGAGCAACGAGGCAG ATGGCGCTTGGGCCGACCCGTTGAATCAGCCATGGCTTAATTATTTTAATAGTTTATTGGTCTTGCTTGATCAAACGATT CGGAGCAAGCATCAACAGCAAATTAATGTTGCCCCCGATGGCTTTGCGCTGAGTACGGCTGGTTGGCCTGAGCGTAGTGC CGATCCCGCTCAAGAGCCATTGAATGATCTGTATTTGAGTCAATCTGGCAAGGCCCAACGTGGTTTTCGAGTCTATCGCG ATTGGCTGACGATTATCAATCGCTACCCGAGCACCGCCAATCGTCCGGTTTATATCACCGCCACCAATACATTTCACCCA GAGCAAGCACGCACGCCGCTGGAAAATTACCCCAAAGGTTGGCTCAGCAATGCCTTGGCTGAAGTCAGCAGCAACCCACA GGTGCAAGCCTTATGTTGGTTTGTTGATCAGCCGTTTGGTCAACAATGGTACGAATGGAGCCTGAGCGAACCTCAAGGCA AACTGCATGAAGCCGCTCAGGAGTTTGATCAACTGTTGCGCTAG
Upstream 100 bases:
>100_bases AGCCTAGTCAAACAGATTTTGGCGCGGCATCATAGCACCCTCCAGATTGAAAGTAGCACCAACCCGCCAACTGGCACACA TATATGGTGGATCTTGCCCT
Downstream 100 bases:
>100_bases GGTTGTGGCTCGATGCTGATCTGCGTTAGTACCGAGTTAGCAATAAAGCATTGCTCATGGGCTTGATGATGAAATTGCTC AATTTGTTCGCTGCTAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTKLRWLSLLILGSIIYWLLPIDGNLVLQTNQQAGWPQIWFERDTQDQQWIYVRDNQPWVYVALTLDGTSLQRDQQFAAG SEPWTWRWSSTSNTLTQADIRFYHDCDRGCQERGSLMIGQPEPTATPRQSSLLGAMFANPDRDWHGRAAWSVDLVYALRA DESQWSVDALASRVAAAHKAGLRVIIRVAYDQGQSLPPNNDETALAIFLRFCQRLAHDQRLQAVYGYSIGNGYNSLGENS LSQEPLTPAWVARILVGYGVATERHDNVIETMRGLNPQLKLLVGPVRPWSNEADGAWADPLNQPWLNYFNSLLVLLDQTI RSKHQQQINVAPDGFALSTAGWPERSADPAQEPLNDLYLSQSGKAQRGFRVYRDWLTIINRYPSTANRPVYITATNTFHP EQARTPLENYPKGWLSNALAEVSSNPQVQALCWFVDQPFGQQWYEWSLSEPQGKLHEAAQEFDQLLR
Sequences:
>Translated_467_residues MTKLRWLSLLILGSIIYWLLPIDGNLVLQTNQQAGWPQIWFERDTQDQQWIYVRDNQPWVYVALTLDGTSLQRDQQFAAG SEPWTWRWSSTSNTLTQADIRFYHDCDRGCQERGSLMIGQPEPTATPRQSSLLGAMFANPDRDWHGRAAWSVDLVYALRA DESQWSVDALASRVAAAHKAGLRVIIRVAYDQGQSLPPNNDETALAIFLRFCQRLAHDQRLQAVYGYSIGNGYNSLGENS LSQEPLTPAWVARILVGYGVATERHDNVIETMRGLNPQLKLLVGPVRPWSNEADGAWADPLNQPWLNYFNSLLVLLDQTI RSKHQQQINVAPDGFALSTAGWPERSADPAQEPLNDLYLSQSGKAQRGFRVYRDWLTIINRYPSTANRPVYITATNTFHP EQARTPLENYPKGWLSNALAEVSSNPQVQALCWFVDQPFGQQWYEWSLSEPQGKLHEAAQEFDQLLR >Mature_466_residues TKLRWLSLLILGSIIYWLLPIDGNLVLQTNQQAGWPQIWFERDTQDQQWIYVRDNQPWVYVALTLDGTSLQRDQQFAAGS EPWTWRWSSTSNTLTQADIRFYHDCDRGCQERGSLMIGQPEPTATPRQSSLLGAMFANPDRDWHGRAAWSVDLVYALRAD ESQWSVDALASRVAAAHKAGLRVIIRVAYDQGQSLPPNNDETALAIFLRFCQRLAHDQRLQAVYGYSIGNGYNSLGENSL SQEPLTPAWVARILVGYGVATERHDNVIETMRGLNPQLKLLVGPVRPWSNEADGAWADPLNQPWLNYFNSLLVLLDQTIR SKHQQQINVAPDGFALSTAGWPERSADPAQEPLNDLYLSQSGKAQRGFRVYRDWLTIINRYPSTANRPVYITATNTFHPE QARTPLENYPKGWLSNALAEVSSNPQVQALCWFVDQPFGQQWYEWSLSEPQGKLHEAAQEFDQLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53125; Mature: 52994
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRWLSLLILGSIIYWLLPIDGNLVLQTNQQAGWPQIWFERDTQDQQWIYVRDNQPWV CCHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCEE YVALTLDGTSLQRDQQFAAGSEPWTWRWSSTSNTLTQADIRFYHDCDRGCQERGSLMIGQ EEEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCEEECC PEPTATPRQSSLLGAMFANPDRDWHGRAAWSVDLVYALRADESQWSVDALASRVAAAHKA CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHC GLRVIIRVAYDQGQSLPPNNDETALAIFLRFCQRLAHDQRLQAVYGYSIGNGYNSLGENS CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC LSQEPLTPAWVARILVGYGVATERHDNVIETMRGLNPQLKLLVGPVRPWSNEADGAWADP CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCC LNQPWLNYFNSLLVLLDQTIRSKHQQQINVAPDGFALSTAGWPERSADPAQEPLNDLYLS CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHC QSGKAQRGFRVYRDWLTIINRYPSTANRPVYITATNTFHPEQARTPLENYPKGWLSNALA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCCHHHCCHHHHHHHHH EVSSNPQVQALCWFVDQPFGQQWYEWSLSEPQGKLHEAAQEFDQLLR HHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure TKLRWLSLLILGSIIYWLLPIDGNLVLQTNQQAGWPQIWFERDTQDQQWIYVRDNQPWV CHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCEE YVALTLDGTSLQRDQQFAAGSEPWTWRWSSTSNTLTQADIRFYHDCDRGCQERGSLMIGQ EEEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCEEECC PEPTATPRQSSLLGAMFANPDRDWHGRAAWSVDLVYALRADESQWSVDALASRVAAAHKA CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHC GLRVIIRVAYDQGQSLPPNNDETALAIFLRFCQRLAHDQRLQAVYGYSIGNGYNSLGENS CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC LSQEPLTPAWVARILVGYGVATERHDNVIETMRGLNPQLKLLVGPVRPWSNEADGAWADP CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCC LNQPWLNYFNSLLVLLDQTIRSKHQQQINVAPDGFALSTAGWPERSADPAQEPLNDLYLS CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHC QSGKAQRGFRVYRDWLTIINRYPSTANRPVYITATNTFHPEQARTPLENYPKGWLSNALA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCCHHHCCHHHHHHHHH EVSSNPQVQALCWFVDQPFGQQWYEWSLSEPQGKLHEAAQEFDQLLR HHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA