Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is resE [H]
Identifier: 159896980
GI number: 159896980
Start: 525327
End: 526139
Strand: Direct
Name: resE [H]
Synonym: Haur_0448
Alternate gene names: 159896980
Gene position: 525327-526139 (Clockwise)
Preceding gene: 159896979
Following gene: 159896981
Centisome position: 8.28
GC content: 51.29
Gene sequence:
>813_bases ATGATTGTTCTACCGCTCAAATCGTTGCTTTTTGGAATTTTATTGCTACTGTGGCTGGTTGCCAGCTTTGCTTGGTGGCT TGGTCAGCGTGGCAAACGCCCCATTATCCAACATAGCGCCGATCCATTATTGCGCCAACAAATTGCTCAGCATCGCGCCT TTATTGGCACGCTTTCGCATGAATTACGCACACCATTAACCGCTCTTTTGGCGCATACCGCAATTGTGCACAACCAACAA AGCGAGCCAGCCGTGCGCGAACATTCGTTGCTCACCTTGGAGCGTGAAGCTCAACGTATGGCTCGCTTGGTACGCGATTT GTTGGAATTGCACCGTTTGGAATTAAGCGATGAATTGCCCTTGGTTCCGGTGAATGTGGCGTTGTTGGCCGAAGAAGCGA TTGCCAGCGTGTGGGTGATGGCCGATGAAGCCCAAATTGAACTGCAATTCGAGGCTGACCCAACCCATCAGCGAGTTTTG GCGCATCCTGATCGCTTAAAACAAGTCTGGCTCAATTTGTTGATGAATTGTTTGCGCTATTGTCGTGCAGGCGATCTGGT GATTGTGCGGGTGCTGGCGAGTGAGCAAGGGTTACGTTGTAGCATTGAAGATAGTGGGCCTGGGATTGCTGCCACTGATT TGCCGCATGTGACCGAGCCACTCTATCGCGGGGTCTTGGATAACGAAGGCAGCGGCTTGGGCTTGAGCCTAGTCAAACAG ATTTTGGCGCGGCATCATAGCACCCTCCAGATTGAAAGTAGCACCAACCCGCCAACTGGCACACATATATGGTGGATCTT GCCCTATGACTAA
Upstream 100 bases:
>100_bases TGTGTGTGCAACGCTTACGTGCTAAAATCAACCAACTTGATGCGAATGCCGACCCGATTCAGACCGTGCGTGGTTTTGGC TATCGGTTAAAGTGTGAGCC
Downstream 100 bases:
>100_bases ATTGCGGTGGCTTAGCCTGCTCATTCTTGGTTCGATCATCTACTGGCTTTTGCCAATCGACGGCAATTTAGTGCTTCAGA CCAACCAACAAGCTGGTTGG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MIVLPLKSLLFGILLLLWLVASFAWWLGQRGKRPIIQHSADPLLRQQIAQHRAFIGTLSHELRTPLTALLAHTAIVHNQQ SEPAVREHSLLTLEREAQRMARLVRDLLELHRLELSDELPLVPVNVALLAEEAIASVWVMADEAQIELQFEADPTHQRVL AHPDRLKQVWLNLLMNCLRYCRAGDLVIVRVLASEQGLRCSIEDSGPGIAATDLPHVTEPLYRGVLDNEGSGLGLSLVKQ ILARHHSTLQIESSTNPPTGTHIWWILPYD
Sequences:
>Translated_270_residues MIVLPLKSLLFGILLLLWLVASFAWWLGQRGKRPIIQHSADPLLRQQIAQHRAFIGTLSHELRTPLTALLAHTAIVHNQQ SEPAVREHSLLTLEREAQRMARLVRDLLELHRLELSDELPLVPVNVALLAEEAIASVWVMADEAQIELQFEADPTHQRVL AHPDRLKQVWLNLLMNCLRYCRAGDLVIVRVLASEQGLRCSIEDSGPGIAATDLPHVTEPLYRGVLDNEGSGLGLSLVKQ ILARHHSTLQIESSTNPPTGTHIWWILPYD >Mature_270_residues MIVLPLKSLLFGILLLLWLVASFAWWLGQRGKRPIIQHSADPLLRQQIAQHRAFIGTLSHELRTPLTALLAHTAIVHNQQ SEPAVREHSLLTLEREAQRMARLVRDLLELHRLELSDELPLVPVNVALLAEEAIASVWVMADEAQIELQFEADPTHQRVL AHPDRLKQVWLNLLMNCLRYCRAGDLVIVRVLASEQGLRCSIEDSGPGIAATDLPHVTEPLYRGVLDNEGSGLGLSLVKQ ILARHHSTLQIESSTNPPTGTHIWWILPYD
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=34.9557522123894, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1790436, Length=259, Percent_Identity=29.7297297297297, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=29.9180327868852, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790346, Length=216, Percent_Identity=28.2407407407407, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=31.0043668122271, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789403, Length=220, Percent_Identity=28.6363636363636, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788549, Length=214, Percent_Identity=28.9719626168224, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789149, Length=227, Percent_Identity=24.2290748898678, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI145693157, Length=231, Percent_Identity=23.8095238095238, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789808, Length=231, Percent_Identity=25.5411255411255, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788713, Length=224, Percent_Identity=25, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=28.82096069869, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790300, Length=222, Percent_Identity=25.6756756756757, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87081816, Length=227, Percent_Identity=24.6696035242291, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1790861, Length=190, Percent_Identity=28.9473684210526, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 30345; Mature: 30345
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLPLKSLLFGILLLLWLVASFAWWLGQRGKRPIIQHSADPLLRQQIAQHRAFIGTLSH CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH ELRTPLTALLAHTAIVHNQQSEPAVREHSLLTLEREAQRMARLVRDLLELHRLELSDELP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPVNVALLAEEAIASVWVMADEAQIELQFEADPTHQRVLAHPDRLKQVWLNLLMNCLRY EEEHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH CRAGDLVIVRVLASEQGLRCSIEDSGPGIAATDLPHVTEPLYRGVLDNEGSGLGLSLVKQ HCCCCEEEEEEECCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHH ILARHHSTLQIESSTNPPTGTHIWWILPYD HHHCCCCEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MIVLPLKSLLFGILLLLWLVASFAWWLGQRGKRPIIQHSADPLLRQQIAQHRAFIGTLSH CEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH ELRTPLTALLAHTAIVHNQQSEPAVREHSLLTLEREAQRMARLVRDLLELHRLELSDELP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPVNVALLAEEAIASVWVMADEAQIELQFEADPTHQRVLAHPDRLKQVWLNLLMNCLRY EEEHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH CRAGDLVIVRVLASEQGLRCSIEDSGPGIAATDLPHVTEPLYRGVLDNEGSGLGLSLVKQ HCCCCEEEEEEECCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHH ILARHHSTLQIESSTNPPTGTHIWWILPYD HHHCCCCEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]