Click here to switch to the map view.

The map label for this gene is ydbC [H]

Identifier: 159896978

GI number: 159896978

Start: 523274

End: 524125

Strand: Direct

Name: ydbC [H]

Synonym: Haur_0446

Alternate gene names: 159896978

Gene position: 523274-524125 (Clockwise)

Preceding gene: 159896977

Following gene: 159896979

Centisome position: 8.24

GC content: 50.12

Gene sequence:

>852_bases
ATGAGCCTCGGTTCTCTAACATTTCGGCTTGGTGGTGATCTCGAAATTCGGCGGTTGGGCTTTGGTGCGATGCGCATCAC
AGGCGATGGAATTTGGGGCGAACCAAGCGATCGCGAACAATCTAAGGCGGTATTACGCCGCGCTGTCGAACTTGGCGTGA
ATTTTATTGATACTGCTGATTCATATGGCCCCGATGTCAGCGAATGTTTGATCGGCGAAGCCTTGCACCCCTACTCAGCT
GATATGGTGATTGCAACCAAAGGTGGCTTGCTGCGCGGCGGCCCGAATATTTGGTATTCCAACGGGCGGCCTGAACATTT
GCGCATTTCGCTGGAAAAAAGCTTGCGCCAATTAAAACTGGAACGGATTGACCTTTACCAATTGCATCGAATTGATGCCC
AAGTGCCTTTGGAAGAATCGTTGGGGGCGCTGAGCGATCTACGCAACGAAGGCAAAATTCGTCATATTGGCCTGAGCGAA
GTTAATAACGAACAATTGGCCCAAGCGCAAAAAGTCGTGCCGATTGTTTCGGTGCAAAATCGTTATAGCATTGGCGACCA
CGAATGGGAAAGCATGGTCGATGCCTGCGAAGCCCAAAATATCGCTTTTATTCCATGGTTCCCGTTGGCGGCTGGCCGAT
TAACTGCGCCTGGTGGCACGCTTGATCAAATTGCCAAAAAATACGAAGCTAGCGTTGGCCAAATTGCCTTGGCATGGTTG
CTCAAACGCTCGCCAGTGATTTTGCCAATCCCTGGAACATCCAAAGTTAAGCATCTCGAAGAAAATATGGGTGCTGAAAA
AATCGCCCTGAGCGACGAAGATTTCCAAACCCTGCGCGAGTTGCAAGCCTAA

Upstream 100 bases:

>100_bases
GAATTGCTGATCGAGCAACCAGATTTTTCGGTTTTTTGGGGGTACAATACATGTGGTTCAGTACTGAACGGTATTGATTG
TGTGTTTTGGAGGAAGCTCG

Downstream 100 bases:

>100_bases
GTAACATCAAAAGGCAAAAGTCAGAAGTCAAAAGATGGAATATGGCTACTGGCTATGGACTATCGGAACATTTTGTAGAA
TTGCCTTTTGTCTTCCCTCA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSLGSLTFRLGGDLEIRRLGFGAMRITGDGIWGEPSDREQSKAVLRRAVELGVNFIDTADSYGPDVSECLIGEALHPYSA
DMVIATKGGLLRGGPNIWYSNGRPEHLRISLEKSLRQLKLERIDLYQLHRIDAQVPLEESLGALSDLRNEGKIRHIGLSE
VNNEQLAQAQKVVPIVSVQNRYSIGDHEWESMVDACEAQNIAFIPWFPLAAGRLTAPGGTLDQIAKKYEASVGQIALAWL
LKRSPVILPIPGTSKVKHLEENMGAEKIALSDEDFQTLRELQA

Sequences:

>Translated_283_residues
MSLGSLTFRLGGDLEIRRLGFGAMRITGDGIWGEPSDREQSKAVLRRAVELGVNFIDTADSYGPDVSECLIGEALHPYSA
DMVIATKGGLLRGGPNIWYSNGRPEHLRISLEKSLRQLKLERIDLYQLHRIDAQVPLEESLGALSDLRNEGKIRHIGLSE
VNNEQLAQAQKVVPIVSVQNRYSIGDHEWESMVDACEAQNIAFIPWFPLAAGRLTAPGGTLDQIAKKYEASVGQIALAWL
LKRSPVILPIPGTSKVKHLEENMGAEKIALSDEDFQTLRELQA
>Mature_282_residues
SLGSLTFRLGGDLEIRRLGFGAMRITGDGIWGEPSDREQSKAVLRRAVELGVNFIDTADSYGPDVSECLIGEALHPYSAD
MVIATKGGLLRGGPNIWYSNGRPEHLRISLEKSLRQLKLERIDLYQLHRIDAQVPLEESLGALSDLRNEGKIRHIGLSEV
NNEQLAQAQKVVPIVSVQNRYSIGDHEWESMVDACEAQNIAFIPWFPLAAGRLTAPGGTLDQIAKKYEASVGQIALAWLL
KRSPVILPIPGTSKVKHLEENMGAEKIALSDEDFQTLRELQA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436964, Length=306, Percent_Identity=24.8366013071895, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI27436962, Length=313, Percent_Identity=24.9201277955272, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI223718702, Length=207, Percent_Identity=32.3671497584541, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI27436966, Length=303, Percent_Identity=25.0825082508251, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI27436971, Length=321, Percent_Identity=24.9221183800623, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI223718708, Length=136, Percent_Identity=36.7647058823529, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI41152114, Length=206, Percent_Identity=30.5825242718447, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787674, Length=282, Percent_Identity=44.3262411347518, Blast_Score=224, Evalue=5e-60,
Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=34.2948717948718, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788070, Length=311, Percent_Identity=28.6173633440514, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789375, Length=306, Percent_Identity=26.797385620915, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1788081, Length=279, Percent_Identity=26.8817204301075, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI48994888, Length=258, Percent_Identity=27.1317829457364, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786400, Length=281, Percent_Identity=25.9786476868327, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789199, Length=339, Percent_Identity=24.4837758112094, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17552492, Length=293, Percent_Identity=26.2798634812287, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71998625, Length=290, Percent_Identity=23.7931034482759, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI212645785, Length=280, Percent_Identity=27.8571428571429, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17538386, Length=288, Percent_Identity=24.6527777777778, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325169, Length=330, Percent_Identity=25.4545454545455, Blast_Score=89, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6323998, Length=290, Percent_Identity=26.2068965517241, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319958, Length=290, Percent_Identity=25.1724137931034, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24646155, Length=295, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24646159, Length=303, Percent_Identity=25.0825082508251, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24657054, Length=282, Percent_Identity=24.113475177305, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31217; Mature: 31086

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGSLTFRLGGDLEIRRLGFGAMRITGDGIWGEPSDREQSKAVLRRAVELGVNFIDTAD
CCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
SYGPDVSECLIGEALHPYSADMVIATKGGLLRGGPNIWYSNGRPEHLRISLEKSLRQLKL
CCCCCHHHHHHHHCCCCCCCCEEEEECCCEEECCCCEEECCCCCCEEEEEHHHHHHHHHH
ERIDLYQLHRIDAQVPLEESLGALSDLRNEGKIRHIGLSEVNNEQLAQAQKVVPIVSVQN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEECC
RYSIGDHEWESMVDACEAQNIAFIPWFPLAAGRLTAPGGTLDQIAKKYEASVGQIALAWL
CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
LKRSPVILPIPGTSKVKHLEENMGAEKIALSDEDFQTLRELQA
HHCCCEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
SLGSLTFRLGGDLEIRRLGFGAMRITGDGIWGEPSDREQSKAVLRRAVELGVNFIDTAD
CCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
SYGPDVSECLIGEALHPYSADMVIATKGGLLRGGPNIWYSNGRPEHLRISLEKSLRQLKL
CCCCCHHHHHHHHCCCCCCCCEEEEECCCEEECCCCEEECCCCCCEEEEEHHHHHHHHHH
ERIDLYQLHRIDAQVPLEESLGALSDLRNEGKIRHIGLSEVNNEQLAQAQKVVPIVSVQN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEECC
RYSIGDHEWESMVDACEAQNIAFIPWFPLAAGRLTAPGGTLDQIAKKYEASVGQIALAWL
CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
LKRSPVILPIPGTSKVKHLEENMGAEKIALSDEDFQTLRELQA
HHCCCEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]