Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896962
Identifier: 159896962
GI number: 159896962
Start: 502725
End: 505151
Strand: Direct
Name: 159896962
Synonym: Haur_0430
Alternate gene names: NA
Gene position: 502725-505151 (Clockwise)
Preceding gene: 159896960
Following gene: 159896963
Centisome position: 7.92
GC content: 47.51
Gene sequence:
>2427_bases ATGGAAGAGCGTTCACAACGGGCCAAGATTGGTGGTTCAGGTCGGCGTTGGCAGGTGTTTCCTGTGCTTGGTGGGGTTGG TTTGTTGGTTACGATGTTGTTGGTGACTCAAACACCTGAGCCACCTGCACCATTGCCAACTGCTACGGTTGTGGCAGAAG CCGTAGTTACGCCCAGTATTTCAACCCAACCAACCCCACAGAATCCAATTTCCTCGTTGCCAGCGGTCGATTTGGCTGGC CAGCAATTACTATTCATTGATCCAAATAATCAGATTAAGCTGTGGGATGGCGTTGGCCTCGTGCAATCGCGCGGGACGGT TGAGCGGCTATATGGTTCAAGTGGTTGGGGATTAACCGTTGATCAGCATCGCGATGTGCTGTTTATTCGTGGCTTCGATT GGCTTGAGGCTCGTTCGTTGCGCGATAATCGGCGCTTGTGGCAACTGCCAATTACCGCTTATGCCAATAATACTGAAACC ACGATCTTGGATGTCGTGAGCGATCCGTTTAATCAATTGGTCTGGTTGGTCGAAAAACAGCGTACAACCGATGCTTTTCA GCCTGCAACGGTGCGCGTGCGTGGCCTCGATAGCCGCAGCGGCCTGGAGTTACGCCGTTATCAAACGCCGCTCGTCAACG ATCCGCCCCACGTTTTGCCAATCGTGAATGGCCCTTGGCTGTTGGCCGATGGTCAATTATTGCCATTTGACCCAGCTAGC GAGGCGTTTGGCAAACCATTGATGAGCAGGCTGGAGTTTGTTCAAGTTGCGCCCGATGGCAAGCAAGCCTTGGTTTTTGG CGCGAACTCGCTCATTGAAATTGATCTGCTAACTCAACAAACGCTTAAGCAAACCGAATTAGCCACCGCGCCTAAAATTA ATTCGATTGAGCACATCATCGCTTCACCTAACTTTAATTATGTATTAATTATTGGTACAGTCTTTGAAGAAACAGATTTC TCTCAGCACATTTTTGTGTATGATCGTGATGGTATCCAGGTTGGCAGTTGGCAGCGCAAATTATTAGCCGAGCGCACCCA TATCGTTGATACTGATGTTAGCAATCACATTCGATTTCTCGATGATCAACGTTTAGTGCTGCTGCATCGCACCGGAATGT TGGAAATCATTAATTTGGCAACTGATTCAATGCAATTGATCAGTCTACGCGAAAAGCCTGATCTTTTTGAACGGCTAGAG CATCTGGCTGGCTTTGAATTAATGCCTAAACTAGAATTACTGCCCTTGGTCGAAAATCCTGAGTTGGAATATTTGGAAGC TCCAGGGTTTGCCAGCGCACCACTTACACCAACAACTGCTCCAAAACCGTTTGGCTTGACTTCGATTGATGGTCAAATCA CCCAGCTTTGGGATGATGGTAGCAGCAAAACGATCAATCAATTAGTCCGCACATTGATCCCGTATTTAATCAGGCGCAAT AATGCTCCACCGTTGTTTATTGATCTGATTGATACCGATTTAGTGCTGATTGATCCGGTCAACCAAACCACCCACAGCAT TGCTTTGGAGCCAATTGAAGCCAAAAGCTTGGATGATTTGGAGGGGATTAGTGCGTCGAATAGCGCAAGTATTGTAATCT GCTATAGCTATCATCTTGATTCTAGTGCCGATTCACGGGTCAATCGTTGTCGTGAGCTGAATTTGCAAACTGGCCAAACC AGCCTGTTTGCTGAACTGCCTGCCGCCACCGATCTTATTCCAATCTACTGGGATGGTCGCCAATTGACAATTGTTGGCAA AACCTATCGTGAAGCGAAGCGATCGTTTGACTATTTGGTGTGGCAAACCTTGGCTGATGATCGTTCGCAAGGCCAAATGC TTTTGCAACCGCTTGATGTACAGCAGCTTTGGTATATGGTTGGCTCACCCACGGTTATCTATCAAAATATGCTTGGCAAT ATTGTGAGTTATCAGCTCTTGGATCAAAATCCTGCCTTATTGATTCAACGGAGTGCTGACCACGATATAGATGTGGATCT AGCACCCAATGGCCAGAGGGTTGTCTTGATTGAGCGTGAATACCCGCTCAACCATGGCACATTAACCATGTTCGATACTG CCACCGGAGCCGAATTATGGCGCGATGACACAACCCGCGATCACGTTGGATTGTGGTCGGGGGATAGTCAGTTCTACCTA ACCCGAACCTATCAAGCAGTTAATTCAAGCCTTAATACCTACACCCATCAAGGCAAACAAGGCCATTCGTTGCTCGTTGC CCAAGGCATCGGTGAATTTGTACCCGATTGGTTGGGGCAGCAGGTTGTATTGCGCATCTACGATGAACTCTTTTTGTTGG AGCGGGTCAACGAACATTGGCTACCCTTGAGCAAATTTCCTAACTTTCAAACAGTCTTTTCGTCGCGCTCTTGGCCAAAG ATTGTCTATGTTTATCCACAACCTTAA
Upstream 100 bases:
>100_bases TGAGGGATGAGGGGGTAGCAAGCAGGCGATTCAAGGCTAGTGGTATGATTGAGGGAACGAAATTTGGTTCAAATCACTAG TTGAAAGAAGAGGTTTGTTG
Downstream 100 bases:
>100_bases CGATTAGCGAGAGTGCGACCATGATGCAGAAGGTTTATCGCAGGCTTGGGTTGTTGCTATGCTTGGGGGTGTTGAGCACC TGCCAAGCCCAACAGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 808; Mature: 808
Protein sequence:
>808_residues MEERSQRAKIGGSGRRWQVFPVLGGVGLLVTMLLVTQTPEPPAPLPTATVVAEAVVTPSISTQPTPQNPISSLPAVDLAG QQLLFIDPNNQIKLWDGVGLVQSRGTVERLYGSSGWGLTVDQHRDVLFIRGFDWLEARSLRDNRRLWQLPITAYANNTET TILDVVSDPFNQLVWLVEKQRTTDAFQPATVRVRGLDSRSGLELRRYQTPLVNDPPHVLPIVNGPWLLADGQLLPFDPAS EAFGKPLMSRLEFVQVAPDGKQALVFGANSLIEIDLLTQQTLKQTELATAPKINSIEHIIASPNFNYVLIIGTVFEETDF SQHIFVYDRDGIQVGSWQRKLLAERTHIVDTDVSNHIRFLDDQRLVLLHRTGMLEIINLATDSMQLISLREKPDLFERLE HLAGFELMPKLELLPLVENPELEYLEAPGFASAPLTPTTAPKPFGLTSIDGQITQLWDDGSSKTINQLVRTLIPYLIRRN NAPPLFIDLIDTDLVLIDPVNQTTHSIALEPIEAKSLDDLEGISASNSASIVICYSYHLDSSADSRVNRCRELNLQTGQT SLFAELPAATDLIPIYWDGRQLTIVGKTYREAKRSFDYLVWQTLADDRSQGQMLLQPLDVQQLWYMVGSPTVIYQNMLGN IVSYQLLDQNPALLIQRSADHDIDVDLAPNGQRVVLIEREYPLNHGTLTMFDTATGAELWRDDTTRDHVGLWSGDSQFYL TRTYQAVNSSLNTYTHQGKQGHSLLVAQGIGEFVPDWLGQQVVLRIYDELFLLERVNEHWLPLSKFPNFQTVFSSRSWPK IVYVYPQP
Sequences:
>Translated_808_residues MEERSQRAKIGGSGRRWQVFPVLGGVGLLVTMLLVTQTPEPPAPLPTATVVAEAVVTPSISTQPTPQNPISSLPAVDLAG QQLLFIDPNNQIKLWDGVGLVQSRGTVERLYGSSGWGLTVDQHRDVLFIRGFDWLEARSLRDNRRLWQLPITAYANNTET TILDVVSDPFNQLVWLVEKQRTTDAFQPATVRVRGLDSRSGLELRRYQTPLVNDPPHVLPIVNGPWLLADGQLLPFDPAS EAFGKPLMSRLEFVQVAPDGKQALVFGANSLIEIDLLTQQTLKQTELATAPKINSIEHIIASPNFNYVLIIGTVFEETDF SQHIFVYDRDGIQVGSWQRKLLAERTHIVDTDVSNHIRFLDDQRLVLLHRTGMLEIINLATDSMQLISLREKPDLFERLE HLAGFELMPKLELLPLVENPELEYLEAPGFASAPLTPTTAPKPFGLTSIDGQITQLWDDGSSKTINQLVRTLIPYLIRRN NAPPLFIDLIDTDLVLIDPVNQTTHSIALEPIEAKSLDDLEGISASNSASIVICYSYHLDSSADSRVNRCRELNLQTGQT SLFAELPAATDLIPIYWDGRQLTIVGKTYREAKRSFDYLVWQTLADDRSQGQMLLQPLDVQQLWYMVGSPTVIYQNMLGN IVSYQLLDQNPALLIQRSADHDIDVDLAPNGQRVVLIEREYPLNHGTLTMFDTATGAELWRDDTTRDHVGLWSGDSQFYL TRTYQAVNSSLNTYTHQGKQGHSLLVAQGIGEFVPDWLGQQVVLRIYDELFLLERVNEHWLPLSKFPNFQTVFSSRSWPK IVYVYPQP >Mature_808_residues MEERSQRAKIGGSGRRWQVFPVLGGVGLLVTMLLVTQTPEPPAPLPTATVVAEAVVTPSISTQPTPQNPISSLPAVDLAG QQLLFIDPNNQIKLWDGVGLVQSRGTVERLYGSSGWGLTVDQHRDVLFIRGFDWLEARSLRDNRRLWQLPITAYANNTET TILDVVSDPFNQLVWLVEKQRTTDAFQPATVRVRGLDSRSGLELRRYQTPLVNDPPHVLPIVNGPWLLADGQLLPFDPAS EAFGKPLMSRLEFVQVAPDGKQALVFGANSLIEIDLLTQQTLKQTELATAPKINSIEHIIASPNFNYVLIIGTVFEETDF SQHIFVYDRDGIQVGSWQRKLLAERTHIVDTDVSNHIRFLDDQRLVLLHRTGMLEIINLATDSMQLISLREKPDLFERLE HLAGFELMPKLELLPLVENPELEYLEAPGFASAPLTPTTAPKPFGLTSIDGQITQLWDDGSSKTINQLVRTLIPYLIRRN NAPPLFIDLIDTDLVLIDPVNQTTHSIALEPIEAKSLDDLEGISASNSASIVICYSYHLDSSADSRVNRCRELNLQTGQT SLFAELPAATDLIPIYWDGRQLTIVGKTYREAKRSFDYLVWQTLADDRSQGQMLLQPLDVQQLWYMVGSPTVIYQNMLGN IVSYQLLDQNPALLIQRSADHDIDVDLAPNGQRVVLIEREYPLNHGTLTMFDTATGAELWRDDTTRDHVGLWSGDSQFYL TRTYQAVNSSLNTYTHQGKQGHSLLVAQGIGEFVPDWLGQQVVLRIYDELFLLERVNEHWLPLSKFPNFQTVFSSRSWPK IVYVYPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90859; Mature: 90859
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERSQRAKIGGSGRRWQVFPVLGGVGLLVTMLLVTQTPEPPAPLPTATVVAEAVVTPSI CCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC STQPTPQNPISSLPAVDLAGQQLLFIDPNNQIKLWDGVGLVQSRGTVERLYGSSGWGLTV CCCCCCCCCHHCCCCEECCCCEEEEECCCCCEEEEECCCEECCCCCHHHHCCCCCCCEEE DQHRDVLFIRGFDWLEARSLRDNRRLWQLPITAYANNTETTILDVVSDPFNQLVWLVEKQ ECCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHC RTTDAFQPATVRVRGLDSRSGLELRRYQTPLVNDPPHVLPIVNGPWLLADGQLLPFDPAS CCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEECCEECCCCCCH EAFGKPLMSRLEFVQVAPDGKQALVFGANSLIEIDLLTQQTLKQTELATAPKINSIEHII HHHCHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHEE ASPNFNYVLIIGTVFEETDFSQHIFVYDRDGIQVGSWQRKLLAERTHIVDTDVSNHIRFL ECCCCCEEEEEEEEECCCCCCCEEEEEECCCCEECHHHHHHHHHHHEEEECCCCCCEEEE DDQRLVLLHRTGMLEIINLATDSMQLISLREKPDLFERLEHLAGFELMPKLELLPLVENP CCCEEEEEECCCCEEEEHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCC ELEYLEAPGFASAPLTPTTAPKPFGLTSIDGQITQLWDDGSSKTINQLVRTLIPYLIRRN CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC NAPPLFIDLIDTDLVLIDPVNQTTHSIALEPIEAKSLDDLEGISASNSASIVICYSYHLD CCCEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECC SSADSRVNRCRELNLQTGQTSLFAELPAATDLIPIYWDGRQLTIVGKTYREAKRSFDYLV CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHH WQTLADDRSQGQMLLQPLDVQQLWYMVGSPTVIYQNMLGNIVSYQLLDQNPALLIQRSAD HHHHHCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCC HDIDVDLAPNGQRVVLIEREYPLNHGTLTMFDTATGAELWRDDTTRDHVGLWSGDSQFYL CCEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCCCEEECCCCCEEE TRTYQAVNSSLNTYTHQGKQGHSLLVAQGIGEFVPDWLGQQVVLRIYDELFLLERVNEHW EEEHHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLSKFPNFQTVFSSRSWPKIVYVYPQP CCHHHCCCHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MEERSQRAKIGGSGRRWQVFPVLGGVGLLVTMLLVTQTPEPPAPLPTATVVAEAVVTPSI CCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC STQPTPQNPISSLPAVDLAGQQLLFIDPNNQIKLWDGVGLVQSRGTVERLYGSSGWGLTV CCCCCCCCCHHCCCCEECCCCEEEEECCCCCEEEEECCCEECCCCCHHHHCCCCCCCEEE DQHRDVLFIRGFDWLEARSLRDNRRLWQLPITAYANNTETTILDVVSDPFNQLVWLVEKQ ECCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHC RTTDAFQPATVRVRGLDSRSGLELRRYQTPLVNDPPHVLPIVNGPWLLADGQLLPFDPAS CCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEECCEECCCCCCH EAFGKPLMSRLEFVQVAPDGKQALVFGANSLIEIDLLTQQTLKQTELATAPKINSIEHII HHHCHHHHHHHHEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHEE ASPNFNYVLIIGTVFEETDFSQHIFVYDRDGIQVGSWQRKLLAERTHIVDTDVSNHIRFL ECCCCCEEEEEEEEECCCCCCCEEEEEECCCCEECHHHHHHHHHHHEEEECCCCCCEEEE DDQRLVLLHRTGMLEIINLATDSMQLISLREKPDLFERLEHLAGFELMPKLELLPLVENP CCCEEEEEECCCCEEEEHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCC ELEYLEAPGFASAPLTPTTAPKPFGLTSIDGQITQLWDDGSSKTINQLVRTLIPYLIRRN CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC NAPPLFIDLIDTDLVLIDPVNQTTHSIALEPIEAKSLDDLEGISASNSASIVICYSYHLD CCCEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECC SSADSRVNRCRELNLQTGQTSLFAELPAATDLIPIYWDGRQLTIVGKTYREAKRSFDYLV CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHH WQTLADDRSQGQMLLQPLDVQQLWYMVGSPTVIYQNMLGNIVSYQLLDQNPALLIQRSAD HHHHHCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCC HDIDVDLAPNGQRVVLIEREYPLNHGTLTMFDTATGAELWRDDTTRDHVGLWSGDSQFYL CCEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCCCEEECCCCCEEE TRTYQAVNSSLNTYTHQGKQGHSLLVAQGIGEFVPDWLGQQVVLRIYDELFLLERVNEHW EEEHHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLSKFPNFQTVFSSRSWPKIVYVYPQP CCHHHCCCHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA