Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896963
Identifier: 159896963
GI number: 159896963
Start: 505172
End: 505561
Strand: Direct
Name: 159896963
Synonym: Haur_0431
Alternate gene names: NA
Gene position: 505172-505561 (Clockwise)
Preceding gene: 159896962
Following gene: 159896964
Centisome position: 7.96
GC content: 47.44
Gene sequence:
>390_bases ATGATGCAGAAGGTTTATCGCAGGCTTGGGTTGTTGCTATGCTTGGGGGTGTTGAGCACCTGCCAAGCCCAACAGCCCAC CCCAACCGTGATTACTCAAGCTAGCCCAACCATGCCACCAGCAGTAGCCCAAGCCAGCCCAACCCAACCAAGCGCCACCC CAACCCCGCTACCCTTGCGTGTGCCCACCAATGAACGGGTGTTGGTGCAATTGAAAAAACCTGAATTTGGCTTAGATATT AACTATTTTTGGATAGAACCAAGTGGCGAATTAACCGCTGTTGGTGCCGAATATCCTTATAAATTTATCAGTATCTTTGC TGAACAGCAACTTGCAATTACCCATTTGGCCCATTTTATTCAGCTTTTTGATTTGACAACCAATCAATAG
Upstream 100 bases:
>100_bases TGAGCAAATTTCCTAACTTTCAAACAGTCTTTTCGTCGCGCTCTTGGCCAAAGATTGTCTATGTTTATCCACAACCTTAA CGATTAGCGAGAGTGCGACC
Downstream 100 bases:
>100_bases AGCAACCAGTCTCTGCTACCGAAATCCTACTCCCTGAAACTGAGCGTTACCCACTAGCGATGTTCGCCAAGGGAAGGGTT TCATATTCGACTCTCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MMQKVYRRLGLLLCLGVLSTCQAQQPTPTVITQASPTMPPAVAQASPTQPSATPTPLPLRVPTNERVLVQLKKPEFGLDI NYFWIEPSGELTAVGAEYPYKFISIFAEQQLAITHLAHFIQLFDLTTNQ
Sequences:
>Translated_129_residues MMQKVYRRLGLLLCLGVLSTCQAQQPTPTVITQASPTMPPAVAQASPTQPSATPTPLPLRVPTNERVLVQLKKPEFGLDI NYFWIEPSGELTAVGAEYPYKFISIFAEQQLAITHLAHFIQLFDLTTNQ >Mature_129_residues MMQKVYRRLGLLLCLGVLSTCQAQQPTPTVITQASPTMPPAVAQASPTQPSATPTPLPLRVPTNERVLVQLKKPEFGLDI NYFWIEPSGELTAVGAEYPYKFISIFAEQQLAITHLAHFIQLFDLTTNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14296; Mature: 14296
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQKVYRRLGLLLCLGVLSTCQAQQPTPTVITQASPTMPPAVAQASPTQPSATPTPLPLR CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VPTNERVLVQLKKPEFGLDINYFWIEPSGELTAVGAEYPYKFISIFAEQQLAITHLAHFI CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH QLFDLTTNQ HHHHHCCCC >Mature Secondary Structure MMQKVYRRLGLLLCLGVLSTCQAQQPTPTVITQASPTMPPAVAQASPTQPSATPTPLPLR CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VPTNERVLVQLKKPEFGLDINYFWIEPSGELTAVGAEYPYKFISIFAEQQLAITHLAHFI CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH QLFDLTTNQ HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA