Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896954
Identifier: 159896954
GI number: 159896954
Start: 493893
End: 494285
Strand: Direct
Name: 159896954
Synonym: Haur_0422
Alternate gene names: NA
Gene position: 493893-494285 (Clockwise)
Preceding gene: 159896953
Following gene: 159896955
Centisome position: 7.78
GC content: 43.51
Gene sequence:
>393_bases GTGGTAGCGACAATTTGGGCCAAAGCAATGGGCTTAATGTTCTACGATTGGTTCGCTGATCGCTCGGCATGGCTTGATGG CATTCGTTTAACTATCGGCAATCTGCTTGTTATTTGGTTGAGCTATGTCGTTTTCCGCTCACCCGACGCGATTTATACCA GTTTCATCGGGATTATTCTCTTGGATTATCTCACCATGAGCTGGATTATCAAACAACGCGCGGCCAAAGCGATTAATCGT GATCCAATTGGCCAGCTCCAAGTTATTGATCATACGCCAAAGATGTATGAATCGCCAACAAAAATTGCTGTGATGATTAA CTTGTTTGCAATTGCGGCGGCAATTCTTAGTAGTTTACTCTTGTTCTTCGTCAGCGTATTTGTATTGAGCTAA
Upstream 100 bases:
>100_bases TAGCTGGCAGATGGCACATATTATTAGCATTGCCTGTGGTGTAACTCCATGGGCCTTCAGAATTTCAACAACAACTGCAT GGGTATGGGGTAGCCTGCTG
Downstream 100 bases:
>100_bases ATGAGCGCAAGGAGTAGCTATGCAACAGCTCGTTCTGGCCTGTGGCTACAATCCATTCGGCTATGTGATTTTCTTCTTCA TCATGGTCATTCCATTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVATIWAKAMGLMFYDWFADRSAWLDGIRLTIGNLLVIWLSYVVFRSPDAIYTSFIGIILLDYLTMSWIIKQRAAKAINR DPIGQLQVIDHTPKMYESPTKIAVMINLFAIAAAILSSLLLFFVSVFVLS
Sequences:
>Translated_130_residues MVATIWAKAMGLMFYDWFADRSAWLDGIRLTIGNLLVIWLSYVVFRSPDAIYTSFIGIILLDYLTMSWIIKQRAAKAINR DPIGQLQVIDHTPKMYESPTKIAVMINLFAIAAAILSSLLLFFVSVFVLS >Mature_130_residues MVATIWAKAMGLMFYDWFADRSAWLDGIRLTIGNLLVIWLSYVVFRSPDAIYTSFIGIILLDYLTMSWIIKQRAAKAINR DPIGQLQVIDHTPKMYESPTKIAVMINLFAIAAAILSSLLLFFVSVFVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14723; Mature: 14723
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATIWAKAMGLMFYDWFADRSAWLDGIRLTIGNLLVIWLSYVVFRSPDAIYTSFIGIIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDYLTMSWIIKQRAAKAINRDPIGQLQVIDHTPKMYESPTKIAVMINLFAIAAAILSSLL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH LFFVSVFVLS HHHHHHHHCC >Mature Secondary Structure MVATIWAKAMGLMFYDWFADRSAWLDGIRLTIGNLLVIWLSYVVFRSPDAIYTSFIGIIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDYLTMSWIIKQRAAKAINRDPIGQLQVIDHTPKMYESPTKIAVMINLFAIAAAILSSLL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH LFFVSVFVLS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA