Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896955
Identifier: 159896955
GI number: 159896955
Start: 494305
End: 494784
Strand: Direct
Name: 159896955
Synonym: Haur_0423
Alternate gene names: NA
Gene position: 494305-494784 (Clockwise)
Preceding gene: 159896954
Following gene: 159896956
Centisome position: 7.79
GC content: 42.5
Gene sequence:
>480_bases ATGCAACAGCTCGTTCTGGCCTGTGGCTACAATCCATTCGGCTATGTGATTTTCTTCTTCATCATGGTCATTCCATTTAG CCTGACTTTAGGCATCAAATGGTTTTTTCTGGCGCAAACGCTACGCGCATCCCACCGTTCGTTATTTCTCCATAGCTTAG GATTAACCTTTATCGTAGGATTGGTGATTGGCTTCGTTTTCATCTCTGCTTATATTCTACCAACTTCTTTATTTGTAATA GAAATCGGGGGTTTCTATTCGTATCAATTTTTTATTTGGGCCATCGTTTGCATTGTCGATACGTTCTTGATTGAACGCTG GTTGCTCAAACCGAAAGCCCAAGCAATCAGCCTAACCGACGATCAGCAATTACAGGTTGAGGCAGCAGCGATTAAATATC AGCCATCCTGGGTCGCTGCCCTCCTTTCGAATACATTAATTGCGATCGTCGTCGCTTTGTTTTTTCAAATGATCGATTAA
Upstream 100 bases:
>100_bases ATGATTAACTTGTTTGCAATTGCGGCGGCAATTCTTAGTAGTTTACTCTTGTTCTTCGTCAGCGTATTTGTATTGAGCTA AATGAGCGCAAGGAGTAGCT
Downstream 100 bases:
>100_bases CTAGCAGTGAGGCCGCCATGCAGCAGATTTTGATTGCTTGTGGCTCCAATCAATTAGGTCAAATTTTTGCCTTAGTTGGG GTATTAGTTCTATTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID
Sequences:
>Translated_159_residues MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID >Mature_159_residues MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18048; Mature: 18048
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVG CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIGFVFISAYILPTSLFVIEIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTD HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC DQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID CCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVG CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVIGFVFISAYILPTSLFVIEIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTD HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC DQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID CCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA