The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896948

Identifier: 159896948

GI number: 159896948

Start: 484608

End: 486020

Strand: Direct

Name: 159896948

Synonym: Haur_0416

Alternate gene names: NA

Gene position: 484608-486020 (Clockwise)

Preceding gene: 159896936

Following gene: 159896951

Centisome position: 7.64

GC content: 51.17

Gene sequence:

>1413_bases
ATGGTTTGGTTGAGGGTCGCCCTAGTTGGGCTGTTGGTAGCGATCGTGCTGGGGAGCATACCCCAAGCCCAAGCTGCTGA
TCAAGGCTCTACAGAACATATTTTTGGTGAAGGCGAGGGTGATCCAGCAGGTGCATTTCAGGTTCTGCGGCTGCATCCTA
TCCCAACCTCAATGAATTTTGGCGATGCGGTGCGTGGGGTCGCCAGTGGTGATAGTTGGTTAGTTGGGGTTGGCCAAAAA
ACCTTTTTTTCGCTTGATGCAGGCAATCATTGGCAGCAACTCGATCCATTGACGCTGTTTCCGGCGGCGGCAGGCGGCCT
ATGTTGCCAACAAGCTTTTGCCTATGATTATGGCCGTGATTTATTTATTTGGTTGTTGCAGTATGCACCTGATGCCCAGC
GTGGGCTTGTGCGCATTGGCTACACCGATAGTGCTGGCTTGGCCGAACAAGCATGGGAATGGTACGACGTGCCCGCCGCC
CAAGGCTTTACTTGGGTTGACCCACAACTTGAACTCAGCGCTAACCAAATTTGGCTGGCGATGGAGCGGCAGGCAGTCGG
CGGGGCCATTGATAGTACATGGGTCAGCCAGATTCAAACTGATACGCTTGAAGACGATTTACCCTTTATTCGGAGTTATT
CCTCAAGCACTGAGCGGGCTTGGCACTTGGTGCGGGGTGCTAAAGATATGATGTATTTTGCAACCCACATCAATCAAACC
AGCCTACGGGTGTATGCTTGGGATGAGAACCAACCAATTCCAACTAGTAGCGATCTCAATGTTGCTGAATGGACAGCTGG
CGCACGCATTTGCCCAACGCCAGATCAGCGCAATTGGTGTAGCGATGATGATGGGCGAATCCGCGCAGGTTGGGTGGCTA
AGGGCACTGTTGGTTTTATGTGGAATGCAGTTTCCAGCAATACCATTACCTTTCCCTATATTGATGCGGTGCGAATGTAT
GAACGTGATCTGAGCTTATTACCATTCAGTTTAGCGCGGCCATTTATTTTCAATGCCCAAAACGGCTTCTCGCTGCCGAG
TGTGGCAGTCAATGGGCGTGATGATGTAGCGGTAAGTTTTTATCACAGCAGTACCAAACAATATCCGACGCTTTCGAGCA
GCATTTTTGATGATTTTACTGCGCCACCACCAGGCTGGGCCTATTACAACGTACAAGGGAGCAGCACCACGCCAAGCCAA
CAGCACTGGGTTGGTCAACTCGACACCCAAGTATTCAGCCCAACAAACCTTGGCTGGAGCGTGACTGGTGCGCGTTTGAA
CGGCTGTGATGAGGCACGTTGTTTACAACCATTCATTGCGATTTTCAGCCGCGAGCGAGATCGTCCAGCGATTGAACGCT
GGCTTAGCCCAGTGCGCTATGAACTTTTCACCCCATTTGTTCAAATGAACTAA

Upstream 100 bases:

>100_bases
CAGCAAGTTGTGACAACAACTGTCACAATCTTTTGTCACAATCTTCATTCAGGGGTATAGTTGCGCTCAATCGAAGGTCA
CTGTTGAAAGGATTATGCTC

Downstream 100 bases:

>100_bases
ACAACAAAAAACCACTGGTTTTTCAACCAGTGGTTTGATTTGGTGCCACCTTCCGGGCTCGAACCGGAGACCCTACAATT
TTCAGTCGTATGCTCTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MVWLRVALVGLLVAIVLGSIPQAQAADQGSTEHIFGEGEGDPAGAFQVLRLHPIPTSMNFGDAVRGVASGDSWLVGVGQK
TFFSLDAGNHWQQLDPLTLFPAAAGGLCCQQAFAYDYGRDLFIWLLQYAPDAQRGLVRIGYTDSAGLAEQAWEWYDVPAA
QGFTWVDPQLELSANQIWLAMERQAVGGAIDSTWVSQIQTDTLEDDLPFIRSYSSSTERAWHLVRGAKDMMYFATHINQT
SLRVYAWDENQPIPTSSDLNVAEWTAGARICPTPDQRNWCSDDDGRIRAGWVAKGTVGFMWNAVSSNTITFPYIDAVRMY
ERDLSLLPFSLARPFIFNAQNGFSLPSVAVNGRDDVAVSFYHSSTKQYPTLSSSIFDDFTAPPPGWAYYNVQGSSTTPSQ
QHWVGQLDTQVFSPTNLGWSVTGARLNGCDEARCLQPFIAIFSRERDRPAIERWLSPVRYELFTPFVQMN

Sequences:

>Translated_470_residues
MVWLRVALVGLLVAIVLGSIPQAQAADQGSTEHIFGEGEGDPAGAFQVLRLHPIPTSMNFGDAVRGVASGDSWLVGVGQK
TFFSLDAGNHWQQLDPLTLFPAAAGGLCCQQAFAYDYGRDLFIWLLQYAPDAQRGLVRIGYTDSAGLAEQAWEWYDVPAA
QGFTWVDPQLELSANQIWLAMERQAVGGAIDSTWVSQIQTDTLEDDLPFIRSYSSSTERAWHLVRGAKDMMYFATHINQT
SLRVYAWDENQPIPTSSDLNVAEWTAGARICPTPDQRNWCSDDDGRIRAGWVAKGTVGFMWNAVSSNTITFPYIDAVRMY
ERDLSLLPFSLARPFIFNAQNGFSLPSVAVNGRDDVAVSFYHSSTKQYPTLSSSIFDDFTAPPPGWAYYNVQGSSTTPSQ
QHWVGQLDTQVFSPTNLGWSVTGARLNGCDEARCLQPFIAIFSRERDRPAIERWLSPVRYELFTPFVQMN
>Mature_470_residues
MVWLRVALVGLLVAIVLGSIPQAQAADQGSTEHIFGEGEGDPAGAFQVLRLHPIPTSMNFGDAVRGVASGDSWLVGVGQK
TFFSLDAGNHWQQLDPLTLFPAAAGGLCCQQAFAYDYGRDLFIWLLQYAPDAQRGLVRIGYTDSAGLAEQAWEWYDVPAA
QGFTWVDPQLELSANQIWLAMERQAVGGAIDSTWVSQIQTDTLEDDLPFIRSYSSSTERAWHLVRGAKDMMYFATHINQT
SLRVYAWDENQPIPTSSDLNVAEWTAGARICPTPDQRNWCSDDDGRIRAGWVAKGTVGFMWNAVSSNTITFPYIDAVRMY
ERDLSLLPFSLARPFIFNAQNGFSLPSVAVNGRDDVAVSFYHSSTKQYPTLSSSIFDDFTAPPPGWAYYNVQGSSTTPSQ
QHWVGQLDTQVFSPTNLGWSVTGARLNGCDEARCLQPFIAIFSRERDRPAIERWLSPVRYELFTPFVQMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52218; Mature: 52218

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWLRVALVGLLVAIVLGSIPQAQAADQGSTEHIFGEGEGDPAGAFQVLRLHPIPTSMNF
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCC
GDAVRGVASGDSWLVGVGQKTFFSLDAGNHWQQLDPLTLFPAAAGGLCCQQAFAYDYGRD
CHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHCCCEEEECCCCCHHHHHHHHHHHCCCH
LFIWLLQYAPDAQRGLVRIGYTDSAGLAEQAWEWYDVPAAQGFTWVDPQLELSANQIWLA
HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCEEECCCEEECCCEEEEE
MERQAVGGAIDSTWVSQIQTDTLEDDLPFIRSYSSSTERAWHLVRGAKDMMYFATHINQT
EEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCC
SLRVYAWDENQPIPTSSDLNVAEWTAGARICPTPDQRNWCSDDDGRIRAGWVAKGTVGFM
EEEEEEECCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
WNAVSSNTITFPYIDAVRMYERDLSLLPFSLARPFIFNAQNGFSLPSVAVNGRDDVAVSF
EECCCCCEEEECHHHHHHHHHHCCHHCCHHHCCCEEEECCCCCCCCEEEECCCCCEEEEE
YHSSTKQYPTLSSSIFDDFTAPPPGWAYYNVQGSSTTPSQQHWVGQLDTQVFSPTNLGWS
EECCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCEE
VTGARLNGCDEARCLQPFIAIFSRERDRPAIERWLSPVRYELFTPFVQMN
EECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MVWLRVALVGLLVAIVLGSIPQAQAADQGSTEHIFGEGEGDPAGAFQVLRLHPIPTSMNF
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCC
GDAVRGVASGDSWLVGVGQKTFFSLDAGNHWQQLDPLTLFPAAAGGLCCQQAFAYDYGRD
CHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHCCCEEEECCCCCHHHHHHHHHHHCCCH
LFIWLLQYAPDAQRGLVRIGYTDSAGLAEQAWEWYDVPAAQGFTWVDPQLELSANQIWLA
HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCEEECCCEEECCCEEEEE
MERQAVGGAIDSTWVSQIQTDTLEDDLPFIRSYSSSTERAWHLVRGAKDMMYFATHINQT
EEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCC
SLRVYAWDENQPIPTSSDLNVAEWTAGARICPTPDQRNWCSDDDGRIRAGWVAKGTVGFM
EEEEEEECCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
WNAVSSNTITFPYIDAVRMYERDLSLLPFSLARPFIFNAQNGFSLPSVAVNGRDDVAVSF
EECCCCCEEEECHHHHHHHHHHCCHHCCHHHCCCEEEECCCCCCCCEEEECCCCCEEEEE
YHSSTKQYPTLSSSIFDDFTAPPPGWAYYNVQGSSTTPSQQHWVGQLDTQVFSPTNLGWS
EECCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCEE
VTGARLNGCDEARCLQPFIAIFSRERDRPAIERWLSPVRYELFTPFVQMN
EECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA