Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is qorB [H]
Identifier: 159896936
GI number: 159896936
Start: 474807
End: 475691
Strand: Direct
Name: qorB [H]
Synonym: Haur_0404
Alternate gene names: 159896936
Gene position: 474807-475691 (Clockwise)
Preceding gene: 159896933
Following gene: 159896948
Centisome position: 7.48
GC content: 54.24
Gene sequence:
>885_bases ATGGCAAATACCCAAGGTTTGGTAGCGATCACAGGTGCGGCTGGGCAATTAGGGCGGTTGGTTTTGCAGCAAGTGCTCGA AAAAGTTGCAGCAAATCAAGTTGTGGCAATCACCCGTGATCCCGCCAAATTGGCCGATGTCGCTGCTCAAGGGGTTAAAG TCGTCGCTGGCGATTTCAGCGATCCCGCTGGTCTGACTGCTGCTTTGGCTGGAGTCGAGCGCGTCTTGATGATCAGTATC GATGTGGTTGGCGGCGAACGTGTGCGCTTGCAAACAGATGCGGTCAAAGCAATCGCTGCGGCTGGCGTGAAGCATTTGGT TTATACCTCGGCAATCAATCCTGCCGAAGCCCCAATGGAATTTATTCGCGAACACGCTGCGACCGAGCAAGCGATTGTGG CGAGCGGTTTGAGCTATAGTTTCTTGCGCAACAACTTCTATTTTGAAACGATCACCGATAAAATCAAAGGCGCTTTGGCT GGTGGCGTAATCGCTGCCGCTGCTGGCGATGCTGCTGCTGGCTTAGTTGCCCGCGCCGATTGTGCTGCCGCCGCCGCTGC CGCCTTGGTCAGCGATAACACCGCCTCAGAAGTGTATAACATCACTGGCCCGGTGAGTTTGACCCATAAAGCAATCGCTG AAACTGTGGCCGAATTTGCAGGCCGCGAAGTCGCCTACTATCCAATTGATGCTGCCAGCGCTCAACAACAACTTGAGCAA TTTGGGCTGCCCGCCCAAATCGCTGGTTTTGTCGTCGCGATCGACCACGATTTGATCGGCTCAGGTGCGTTGGATCTTGT GACCAACGACGTTGAGCGCTTGACTGGCAAGCCAGCCCAATCGTTGGCCGAGTATCTCAATGCCAATCGCGAGTTGTTTA GCTAA
Upstream 100 bases:
>100_bases GGTTGACACTATACCACGGCTTCTTTATGCTATTCAACAGATGTCAATTAAACAACGAGTGTTGTTTAGATCTAAAAATA CATTAGCGAGGTTTTCAATC
Downstream 100 bases:
>100_bases TTCCCTCACCCCAACCCCTCTCCCACTGCGGCGGGAGAGGGGCTTTTGGTTTCGTGGTTTCCCCTCGCCTGCGGGAGAGG GAGTGTGGGGGGTGGGCATG
Product: NmrA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MANTQGLVAITGAAGQLGRLVLQQVLEKVAANQVVAITRDPAKLADVAAQGVKVVAGDFSDPAGLTAALAGVERVLMISI DVVGGERVRLQTDAVKAIAAAGVKHLVYTSAINPAEAPMEFIREHAATEQAIVASGLSYSFLRNNFYFETITDKIKGALA GGVIAAAAGDAAAGLVARADCAAAAAAALVSDNTASEVYNITGPVSLTHKAIAETVAEFAGREVAYYPIDAASAQQQLEQ FGLPAQIAGFVVAIDHDLIGSGALDLVTNDVERLTGKPAQSLAEYLNANRELFS
Sequences:
>Translated_294_residues MANTQGLVAITGAAGQLGRLVLQQVLEKVAANQVVAITRDPAKLADVAAQGVKVVAGDFSDPAGLTAALAGVERVLMISI DVVGGERVRLQTDAVKAIAAAGVKHLVYTSAINPAEAPMEFIREHAATEQAIVASGLSYSFLRNNFYFETITDKIKGALA GGVIAAAAGDAAAGLVARADCAAAAAAALVSDNTASEVYNITGPVSLTHKAIAETVAEFAGREVAYYPIDAASAQQQLEQ FGLPAQIAGFVVAIDHDLIGSGALDLVTNDVERLTGKPAQSLAEYLNANRELFS >Mature_293_residues ANTQGLVAITGAAGQLGRLVLQQVLEKVAANQVVAITRDPAKLADVAAQGVKVVAGDFSDPAGLTAALAGVERVLMISID VVGGERVRLQTDAVKAIAAAGVKHLVYTSAINPAEAPMEFIREHAATEQAIVASGLSYSFLRNNFYFETITDKIKGALAG GVIAAAAGDAAAGLVARADCAAAAAAALVSDNTASEVYNITGPVSLTHKAIAETVAEFAGREVAYYPIDAASAQQQLEQF GLPAQIAGFVVAIDHDLIGSGALDLVTNDVERLTGKPAQSLAEYLNANRELFS
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=279, Percent_Identity=37.2759856630824, Blast_Score=148, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 30171; Mature: 30039
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTQGLVAITGAAGQLGRLVLQQVLEKVAANQVVAITRDPAKLADVAAQGVKVVAGDFS CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEECCCC DPAGLTAALAGVERVLMISIDVVGGERVRLQTDAVKAIAAAGVKHLVYTSAINPAEAPME CCCHHHHHHHHHHEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIREHAATEQAIVASGLSYSFLRNNFYFETITDKIKGALAGGVIAAAAGDAAAGLVARAD HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHH CAAAAAAALVSDNTASEVYNITGPVSLTHKAIAETVAEFAGREVAYYPIDAASAQQQLEQ HHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH FGLPAQIAGFVVAIDHDLIGSGALDLVTNDVERLTGKPAQSLAEYLNANRELFS CCCCHHHCCEEEEECCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCC >Mature Secondary Structure ANTQGLVAITGAAGQLGRLVLQQVLEKVAANQVVAITRDPAKLADVAAQGVKVVAGDFS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEECCCC DPAGLTAALAGVERVLMISIDVVGGERVRLQTDAVKAIAAAGVKHLVYTSAINPAEAPME CCCHHHHHHHHHHEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIREHAATEQAIVASGLSYSFLRNNFYFETITDKIKGALAGGVIAAAAGDAAAGLVARAD HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHH CAAAAAAALVSDNTASEVYNITGPVSLTHKAIAETVAEFAGREVAYYPIDAASAQQQLEQ HHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH FGLPAQIAGFVVAIDHDLIGSGALDLVTNDVERLTGKPAQSLAEYLNANRELFS CCCCHHHCCEEEEECCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]