Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896933
Identifier: 159896933
GI number: 159896933
Start: 471172
End: 472380
Strand: Direct
Name: 159896933
Synonym: Haur_0401
Alternate gene names: NA
Gene position: 471172-472380 (Clockwise)
Preceding gene: 159896932
Following gene: 159896936
Centisome position: 7.42
GC content: 50.21
Gene sequence:
>1209_bases ATGATTAAACGAATATGGATAGTGTTGTGTGGCTTGATGCTTGGCCAGCGCTGCTGGAAATGGTGGCAAGTATGGCGCTT TTTTGGCAAGCCTACTCCTACTGCTCAACACGAGCCTGCGACCACCTTGGTGAGTTTGCTCCAGCCAATTTTGAGCGGCG ACCCGCATTTGGCCATATGTTTACGCGCCAATTTGAATGCGCCAAGCAGCTATAAGCGCGAATGGCTATGGTTAATTGAT GATGATGATCGGATCGCTCAACAGCTTTGCTATGGATTGCAAGCAGAATATGCCGAGCAAACGATTCGGATTATCAGTTT GCCAGCCCCAGCTGAGCGGGTTAATCCCAAAACCTTCAAGCTAATTGCGGGATTACAACAAGCCCAAGGCCAAATTATTT GCGTGCTCGACGATGATACCAGCCTGCCAGCCTATGGCTTGGAACAATGTTTGCCATGGCTCGATCAAGCGGGAGTAGGC TTGGCCTTTGGCTTGCCCTACTATCGCTCGTTCGATAATACTTGGTCGAGTTTGGTGGCATTGTTTGTTAATAGCAATAG TTTGCTGACCTATGTACCCTATAGCCAAGTTAGCGAGCCATTTACGATCAATGGAATGTTCTATGCCATGCGCCGCGACG TTTTGGAGCAATTGCATGGTTTTGTTGGCTTAGAGCATATTTTGGCTGACGATTTTGCGGTGGCGCAACGGGTGCAACAG GCAGGCCTGCGCTTGCAGCAAACCAGCATGCGCCATGCAATTCGTACTACCGTGACCAATGCCCAACGCTATCGCAGCCT GATCCAACGCTGGTTTATCTTCCCACGTGAATCGCTGCTACGCCATTTGAATCGGCGCGAACGCAGCTTGCTGTTTTGTT TGGCGATTGTGCCCACGCTGTTTCCATTGGTTTTGGCGATCGTGAGCGTCTTGCGACCAAGCCAACGTCAACGCTGGTTT GCTGCAACGTATACTTTGCTTGGCCTGATCAGTTTTATTCAGATTGATCAAGCCTACCTAGAGCAAGCCACGCCACGGCG CTATTGGCTGTTTGTACCATTTTTAGAATTGCTCATTCCAGTGCAATTGATTCAAGCCTTGCTTGCGCCTCAGCGCATTG TTTGGCGCGGCCATGTGATGGATGTGGAAAAAGGCGGCGCATTTCGCTTTGTGCAACGCAGGGATGATGGTTCGGCGAAT GGGTTCTAG
Upstream 100 bases:
>100_bases CTTTGGGGTTTGCTGGGCGATGATACGATTGTTTGGCGCGGTGAGCGGATTCGGCTGCGGCATTCGGCCTCGGCTCAATG GTTGGGCAAGGAGCAAGATC
Downstream 100 bases:
>100_bases GATTCAGTTTTTAGCCACGAATTACACAAATTACCCGAATAATTGGCTGAGTGTTAATCGCTCAAACTTCAACCTTCGTG CTCTTTGTGTTCTTCGTGGT
Product: nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MIKRIWIVLCGLMLGQRCWKWWQVWRFFGKPTPTAQHEPATTLVSLLQPILSGDPHLAICLRANLNAPSSYKREWLWLID DDDRIAQQLCYGLQAEYAEQTIRIISLPAPAERVNPKTFKLIAGLQQAQGQIICVLDDDTSLPAYGLEQCLPWLDQAGVG LAFGLPYYRSFDNTWSSLVALFVNSNSLLTYVPYSQVSEPFTINGMFYAMRRDVLEQLHGFVGLEHILADDFAVAQRVQQ AGLRLQQTSMRHAIRTTVTNAQRYRSLIQRWFIFPRESLLRHLNRRERSLLFCLAIVPTLFPLVLAIVSVLRPSQRQRWF AATYTLLGLISFIQIDQAYLEQATPRRYWLFVPFLELLIPVQLIQALLAPQRIVWRGHVMDVEKGGAFRFVQRRDDGSAN GF
Sequences:
>Translated_402_residues MIKRIWIVLCGLMLGQRCWKWWQVWRFFGKPTPTAQHEPATTLVSLLQPILSGDPHLAICLRANLNAPSSYKREWLWLID DDDRIAQQLCYGLQAEYAEQTIRIISLPAPAERVNPKTFKLIAGLQQAQGQIICVLDDDTSLPAYGLEQCLPWLDQAGVG LAFGLPYYRSFDNTWSSLVALFVNSNSLLTYVPYSQVSEPFTINGMFYAMRRDVLEQLHGFVGLEHILADDFAVAQRVQQ AGLRLQQTSMRHAIRTTVTNAQRYRSLIQRWFIFPRESLLRHLNRRERSLLFCLAIVPTLFPLVLAIVSVLRPSQRQRWF AATYTLLGLISFIQIDQAYLEQATPRRYWLFVPFLELLIPVQLIQALLAPQRIVWRGHVMDVEKGGAFRFVQRRDDGSAN GF >Mature_402_residues MIKRIWIVLCGLMLGQRCWKWWQVWRFFGKPTPTAQHEPATTLVSLLQPILSGDPHLAICLRANLNAPSSYKREWLWLID DDDRIAQQLCYGLQAEYAEQTIRIISLPAPAERVNPKTFKLIAGLQQAQGQIICVLDDDTSLPAYGLEQCLPWLDQAGVG LAFGLPYYRSFDNTWSSLVALFVNSNSLLTYVPYSQVSEPFTINGMFYAMRRDVLEQLHGFVGLEHILADDFAVAQRVQQ AGLRLQQTSMRHAIRTTVTNAQRYRSLIQRWFIFPRESLLRHLNRRERSLLFCLAIVPTLFPLVLAIVSVLRPSQRQRWF AATYTLLGLISFIQIDQAYLEQATPRRYWLFVPFLELLIPVQLIQALLAPQRIVWRGHVMDVEKGGAFRFVQRRDDGSAN GF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46263; Mature: 46263
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRIWIVLCGLMLGQRCWKWWQVWRFFGKPTPTAQHEPATTLVSLLQPILSGDPHLAIC CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE LRANLNAPSSYKREWLWLIDDDDRIAQQLCYGLQAEYAEQTIRIISLPAPAERVNPKTFK EEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHCCCHHHH LIAGLQQAQGQIICVLDDDTSLPAYGLEQCLPWLDQAGVGLAFGLPYYRSFDNTWSSLVA HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH LFVNSNSLLTYVPYSQVSEPFTINGMFYAMRRDVLEQLHGFVGLEHILADDFAVAQRVQQ HHCCCCCEEEECCHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLRLQQTSMRHAIRTTVTNAQRYRSLIQRWFIFPRESLLRHLNRRERSLLFCLAIVPTL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FPLVLAIVSVLRPSQRQRWFAATYTLLGLISFIQIDQAYLEQATPRRYWLFVPFLELLIP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH VQLIQALLAPQRIVWRGHVMDVEKGGAFRFVQRRDDGSANGF HHHHHHHHCCHHEEEECCEEEECCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MIKRIWIVLCGLMLGQRCWKWWQVWRFFGKPTPTAQHEPATTLVSLLQPILSGDPHLAIC CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE LRANLNAPSSYKREWLWLIDDDDRIAQQLCYGLQAEYAEQTIRIISLPAPAERVNPKTFK EEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHCCCHHHH LIAGLQQAQGQIICVLDDDTSLPAYGLEQCLPWLDQAGVGLAFGLPYYRSFDNTWSSLVA HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH LFVNSNSLLTYVPYSQVSEPFTINGMFYAMRRDVLEQLHGFVGLEHILADDFAVAQRVQQ HHCCCCCEEEECCHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLRLQQTSMRHAIRTTVTNAQRYRSLIQRWFIFPRESLLRHLNRRERSLLFCLAIVPTL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FPLVLAIVSVLRPSQRQRWFAATYTLLGLISFIQIDQAYLEQATPRRYWLFVPFLELLIP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH VQLIQALLAPQRIVWRGHVMDVEKGGAFRFVQRRDDGSANGF HHHHHHHHCCHHEEEECCEEEECCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA