Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is cls [H]
Identifier: 159896920
GI number: 159896920
Start: 458411
End: 459631
Strand: Direct
Name: cls [H]
Synonym: Haur_0388
Alternate gene names: 159896920
Gene position: 458411-459631 (Clockwise)
Preceding gene: 159896919
Following gene: 159896921
Centisome position: 7.22
GC content: 49.3
Gene sequence:
>1221_bases ATGCCGTTTGAGTCGTTTCAAGATCTGATAACAATGCTGGTGGTTATTCTCGTGCTCCAAGTGAGCTTGGCATTGTTGTT AATTGGCGTGCGCAAATGGCGACCAACGCGCTATCAACGCTATCCGCGCATTAGCCTGCCACCAACCAGCGACGAGCGCC ATCAATTTCAGTTGTATATGTCGGGCGAAGAGCTGTTTCCGGCCATGCTGCAAGCGATTGAATCGGCGCAGCGCTTGATT TTGCTCGAAACCTTTATTTTCAAAGGCGATGATTTAGGCCATAAATTTCGTGAAGCCTTATTGCGCAAAGCTCGCAGCGG CGTGGCCGTCTATGTGATTATCGATGGGTTTGCCAATTTGGTGGTCCCACGCAAATTCAAAAATTTTCCGCCGGAAATTC AACTGTTGAGCTACCCAGCTTTTCCGCGTTTATCGCAGATTTTCGATATTGGTTCGTATGCGCGTGACCATCGCAAACTG TTGGTCGTTGATAACGAAGTGGCCTTTATTGGGGGCTACAATTTGGGTGAATTGTATCGCACTGAGTGGCGCGATACTCA TGTGCAGGTGCGTGGCCCGATTGTCAGCAATTTGGCCGAAATGTTTGCTTCGCAATGGAACCGTTATCGCCGCCGCCTAA CGCGCTTGCACATCGACCTCGAGTTGGAATGGCAATCGACAGTGCGGGTACAGCGCAACGACGCTGGCCGCTTGGTTTTT CCAATTCGTTCGATGTATCTTGATGCAATTGAACGAGCTGAACGGTTTGTTTACATTAGCAACGCCTATTTTATTCCCGA TCGGGCGATTTTAGAGGCCTTGGTGCTGACCGCACGGCGCGGAGTTGATGTGCGCATTTTGGTTCCAGCTGAATCGAACC ATGTGTTGGCCGATTGGCTGGCGCGGCATTATTTTGAATTTTGCCTGCGCCATGGGATTAAAATTTTTCTCTACGAAAAT GCCATGATTCACGCCAAAACCGCTACGATCGATGGAATTTGGTCAACGGTTGGCACGGCCAATCTTGATCGGCTGAGTTT AGCGGGCAACCATGAAATCAATCTAGAAATTTATAACGCCGCCTTTGCTGAACGGATGCAAGAAATTTTTGCCTGCGATA TGGCTAATGCCCGTGAATTAACCTTGGCCGAATGGATTAAGCGCCCATGGTATACCAAGGCCGCCGAGTTGGTGCTCTCG CCATTATGGCCAATTTTGTAG
Upstream 100 bases:
>100_bases GTTTATTGATTGTGCCCGAAGCAGGTCATGGCATTAATCGTGGTGCAATGGCCGAAGTTGTGTTATTTGGGGAACTGCAC TAGTTGAGGGAGCGTAGCGC
Downstream 100 bases:
>100_bases AAATGGAGCAAGCATGCTCAAACGCAACGAATCTTTAGCCTTTGGCCGCCCATTTTTGATTACGGTGATTGCAATTGGCT ATGTTTTGACGGCGATGTTG
Product: phospholipase D/transphosphatidylase
Products: cardiolipin; glycerol [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MPFESFQDLITMLVVILVLQVSLALLLIGVRKWRPTRYQRYPRISLPPTSDERHQFQLYMSGEELFPAMLQAIESAQRLI LLETFIFKGDDLGHKFREALLRKARSGVAVYVIIDGFANLVVPRKFKNFPPEIQLLSYPAFPRLSQIFDIGSYARDHRKL LVVDNEVAFIGGYNLGELYRTEWRDTHVQVRGPIVSNLAEMFASQWNRYRRRLTRLHIDLELEWQSTVRVQRNDAGRLVF PIRSMYLDAIERAERFVYISNAYFIPDRAILEALVLTARRGVDVRILVPAESNHVLADWLARHYFEFCLRHGIKIFLYEN AMIHAKTATIDGIWSTVGTANLDRLSLAGNHEINLEIYNAAFAERMQEIFACDMANARELTLAEWIKRPWYTKAAELVLS PLWPIL
Sequences:
>Translated_406_residues MPFESFQDLITMLVVILVLQVSLALLLIGVRKWRPTRYQRYPRISLPPTSDERHQFQLYMSGEELFPAMLQAIESAQRLI LLETFIFKGDDLGHKFREALLRKARSGVAVYVIIDGFANLVVPRKFKNFPPEIQLLSYPAFPRLSQIFDIGSYARDHRKL LVVDNEVAFIGGYNLGELYRTEWRDTHVQVRGPIVSNLAEMFASQWNRYRRRLTRLHIDLELEWQSTVRVQRNDAGRLVF PIRSMYLDAIERAERFVYISNAYFIPDRAILEALVLTARRGVDVRILVPAESNHVLADWLARHYFEFCLRHGIKIFLYEN AMIHAKTATIDGIWSTVGTANLDRLSLAGNHEINLEIYNAAFAERMQEIFACDMANARELTLAEWIKRPWYTKAAELVLS PLWPIL >Mature_405_residues PFESFQDLITMLVVILVLQVSLALLLIGVRKWRPTRYQRYPRISLPPTSDERHQFQLYMSGEELFPAMLQAIESAQRLIL LETFIFKGDDLGHKFREALLRKARSGVAVYVIIDGFANLVVPRKFKNFPPEIQLLSYPAFPRLSQIFDIGSYARDHRKLL VVDNEVAFIGGYNLGELYRTEWRDTHVQVRGPIVSNLAEMFASQWNRYRRRLTRLHIDLELEWQSTVRVQRNDAGRLVFP IRSMYLDAIERAERFVYISNAYFIPDRAILEALVLTARRGVDVRILVPAESNHVLADWLARHYFEFCLRHGIKIFLYENA MIHAKTATIDGIWSTVGTANLDRLSLAGNHEINLEIYNAAFAERMQEIFACDMANARELTLAEWIKRPWYTKAAELVLSP LWPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787007, Length=357, Percent_Identity=32.2128851540616, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1787502, Length=372, Percent_Identity=25.8064516129032, Blast_Score=135, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 47184; Mature: 47053
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFESFQDLITMLVVILVLQVSLALLLIGVRKWRPTRYQRYPRISLPPTSDERHQFQLYM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEE SGEELFPAMLQAIESAQRLILLETFIFKGDDLGHKFREALLRKARSGVAVYVIIDGFANL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHH VVPRKFKNFPPEIQLLSYPAFPRLSQIFDIGSYARDHRKLLVVDNEVAFIGGYNLGELYR CCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCHHHHHH TEWRDTHVQVRGPIVSNLAEMFASQWNRYRRRLTRLHIDLELEWQSTVRVQRNDAGRLVF HCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCCEEH PIRSMYLDAIERAERFVYISNAYFIPDRAILEALVLTARRGVDVRILVPAESNHVLADWL HHHHHHHHHHHHCCEEEEEECEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH ARHYFEFCLRHGIKIFLYENAMIHAKTATIDGIWSTVGTANLDRLSLAGNHEINLEIYNA HHHHHHHHHHCCCEEEEEECEEEEEEECCHHHHHHHHCCCCCCEEEECCCCEEEEEEEHH AFAERMQEIFACDMANARELTLAEWIKRPWYTKAAELVLSPLWPIL HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure PFESFQDLITMLVVILVLQVSLALLLIGVRKWRPTRYQRYPRISLPPTSDERHQFQLYM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEE SGEELFPAMLQAIESAQRLILLETFIFKGDDLGHKFREALLRKARSGVAVYVIIDGFANL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHH VVPRKFKNFPPEIQLLSYPAFPRLSQIFDIGSYARDHRKLLVVDNEVAFIGGYNLGELYR CCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCHHHHHH TEWRDTHVQVRGPIVSNLAEMFASQWNRYRRRLTRLHIDLELEWQSTVRVQRNDAGRLVF HCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCCEEH PIRSMYLDAIERAERFVYISNAYFIPDRAILEALVLTARRGVDVRILVPAESNHVLADWL HHHHHHHHHHHHCCEEEEEECEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH ARHYFEFCLRHGIKIFLYENAMIHAKTATIDGIWSTVGTANLDRLSLAGNHEINLEIYNA HHHHHHHHHHCCCEEEEEECEEEEEEECCHHHHHHHHCCCCCCEEEECCCCEEEEEEEHH AFAERMQEIFACDMANARELTLAEWIKRPWYTKAAELVLSPLWPIL HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 L-1-phosphatidyl-glycerol [C]
Specific reaction: 2 L-1-phosphatidyl-glycerol = cardiolipin + glycerol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10585141 [H]