| Definition | Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence. |
|---|---|
| Accession | NC_009957 |
| Length | 126,304 |
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The map label for this gene is envZ [H]
Identifier: 159046587
GI number: 159046587
Start: 108530
End: 109996
Strand: Direct
Name: envZ [H]
Synonym: Dshi_4049
Alternate gene names: 159046587
Gene position: 108530-109996 (Clockwise)
Preceding gene: 159046586
Following gene: 159046588
Centisome position: 85.93
GC content: 59.51
Gene sequence:
>1467_bases ATGCGCCGTGCGATGAGATCTCTGAGCGGCCAATTGATCCTGCTTGTGGTCGCGGCACTTGTCGTGGCCCAGGTGATCAG CCTGTTCCTGTTCGCCGACGAGCGCAGCCTTGCGATCCGTGCAGCTTTAGGATTCGAGGCCGCGGGTCGCGCAGCGAATG TCGCGCGGTTGATCGAAGAGGCCCCGCTGGATCTGCAGGACTCGATCCTTCGCGCGGCAAATTCGCCTCTGATCCGGTTC GATCTGTCGGACGCTCCGATCGTGGATCACACCGGTCATTCGGACGGCGGCATCGTGGAAGCGCGCATACGCGCCCTGAT GGATGACAGCTACAGCCGGGATATTCGCGTTGAATTGCACGAGGTCGAGGGCGAGTTGCGGCCTCTTCCCAATCTCTCGG ACGAGATGACAGAAATGCATCTCGCGATGATGCGCGGAGAGTTGACAGCGGTTGAAATGAACCTGTCCATCGCCATCAAG GGAGCGCGTTGGCTGAATGTCGGAACGCGGTTCGAGCGACCGCCGATCCAATGGCCTTTCTATTCGATGCTGACCTTCGG GATTTCCGCCGGACTGCTTCTGGTGGCGATCTTCTGGTTTGTAATGACGCGCCTGACGCGTCCTTTGCGGCACCTGTCGA AGGCCGCGGACCATCTTGGCCGGGGCGAAGATGTGGGCGAATTGGCGGTCACAGGGCCGACCGAGGTCAGAGATCTGACC GTCGCATTCAACCGCATGCAACGACGGCTGACCCGGTTTGTCAGTGATCGTACACGTATGCTCGCAGCCCTTGGCCACGA TTTACGCTCGCCGTTGACTGCCATGCGTGTCCGCGCGGAGCTGGTTGACGAAGAAGAGACGCGGGACAGCCTCATCGCAT CGGTCGAAGAGATGCAGAGTATGGTCGAAGCGACGCTCACCTTTGCACGCGGCCTTACCGGATCCGAAGGTGCCGAAGTG GTCGATCTGCGCAATTTTCTGGACAGCTTGTGCAGCGATATGGCGGCACACTGCACCTTTGCCCCGAGTGATGATGTTGC CGTGCGGCTTCGACCCAACGCGTTCCGAAGGGCACTGAGGAACTTGCTTGAGAACGCCGTTCGCTACGGTGGTGCCGCAA AAGTCAGCTGGGCGACCCACGGTTCGAACCTCGTACTCAACATCGATGACAATGGGCCCGGCATTCCCGTCGACCAGTTG GAAAAGGTCTTCGATCCGTTCTATCGCCTCGAGCAATCGAGGTCTCTGGAAACGGGCGGTTATGGGCTTGGGCTCTCAAT CGCGAGGACAATCGTCCAATCCCATGGCGGCGATATCCAGCTGGTCAATCAGAACAGCGCGGGTTTGCGCGCTGTTGTCA CCATCCCGTTGGATGAAACCGAACTGATCGAAGGAGAAACAGATGAAACTGAACGCGTTGATCCTGCCGTTGCTGGCCAG CTTGCCCGCCAGCATGGCGCAGGCTGA
Upstream 100 bases:
>100_bases TCCGCCGCAAAATCGAGCCGGATGTACTTAGGCCCAGTGTCATCAAAACGGTGCGGAACGGCGGATACTGTCTGGCTGCC GATGTCGAGGATGCGCCGTG
Downstream 100 bases:
>100_bases TGGACCAGGCTCCTGGACGGGGCACATGTGGGGCAGTGGCTATGGCTTTATGGGCGGCTTCATGATGCTCGCCTTCTGGG GTGCGCTGATCGCATTGGTG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEEAPLDLQDSILRAANSPLIRF DLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELHEVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIK GARWLNVGTRFERPPIQWPFYSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLT VAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQSMVEATLTFARGLTGSEGAEV VDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALRNLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQL EKVFDPFYRLEQSRSLETGGYGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQ LARQHGAG
Sequences:
>Translated_488_residues MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEEAPLDLQDSILRAANSPLIRF DLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELHEVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIK GARWLNVGTRFERPPIQWPFYSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLT VAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQSMVEATLTFARGLTGSEGAEV VDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALRNLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQL EKVFDPFYRLEQSRSLETGGYGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQ LARQHGAG >Mature_488_residues MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEEAPLDLQDSILRAANSPLIRF DLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELHEVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIK GARWLNVGTRFERPPIQWPFYSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLT VAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQSMVEATLTFARGLTGSEGAEV VDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALRNLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQL EKVFDPFYRLEQSRSLETGGYGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQ LARQHGAG
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=334, Percent_Identity=31.1377245508982, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1790346, Length=267, Percent_Identity=29.9625468164794, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1786783, Length=288, Percent_Identity=29.1666666666667, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787894, Length=264, Percent_Identity=29.5454545454545, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87082128, Length=299, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=27.9411764705882, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1786912, Length=219, Percent_Identity=34.703196347032, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790551, Length=294, Percent_Identity=29.5918367346939, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786600, Length=279, Percent_Identity=26.8817204301075, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789403, Length=307, Percent_Identity=29.3159609120521, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788279, Length=251, Percent_Identity=27.0916334661355, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87081816, Length=336, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790861, Length=493, Percent_Identity=26.1663286004057, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=22.3107569721116, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI145693157, Length=221, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1787374, Length=278, Percent_Identity=25.5395683453237, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=252, Percent_Identity=25, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790436, Length=246, Percent_Identity=24.7967479674797, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53595; Mature: 53595
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHHHHHHH APLDLQDSILRAANSPLIRFDLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELH CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE EVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIKGARWLNVGTRFERPPIQWPF ECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCCCH YSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHH VAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MVEATLTFARGLTGSEGAEVVDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHH NLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQLEKVFDPFYRLEQSRSLETGG HHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQ CCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCHHCCHHHHHH LARQHGAG HHHHCCCC >Mature Secondary Structure MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHHHHHHH APLDLQDSILRAANSPLIRFDLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELH CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE EVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIKGARWLNVGTRFERPPIQWPF ECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCCCH YSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHH VAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MVEATLTFARGLTGSEGAEVVDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHH NLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQLEKVFDPFYRLEQSRSLETGG HHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQ CCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCHHCCHHHHHH LARQHGAG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]